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Figure 3 from: Abarenkov K, Kristiansson E, Ryberg M, Nogal-Prata S, Gómez-Martínez D, Stüer-Patowsky K, Jansson T, Põlme S, Ghobad-Nejhad M, Corcoll N, Scharn R, Sánchez-García M, Khomich M, Wurzbacher C, Nilsson RH (2022) The curse of the uncultured fungus. MycoKeys 86: 177-194. https://doi.org/10.3897/mycokeys.86.76053
Figure 3 The top 15 most common countries of collection for the publication-associated sequences annotated at or beyond the phylum level (green) expressed as the proportion of the sequences stemming from each country out of all phylum-level-and-beyond sequences. The corresponding country for publication-associated sequences annotated only at the kingdom level (orange) is similarly expressed as the proportion of sequences stemming from that country out of all kingdom-level sequences. The figure is ordered in decreasing order by the country of collection for the phylum-level sequences.
Figure 1 from: Abarenkov K, Kristiansson E, Ryberg M, Nogal-Prata S, Gómez-Martínez D, Stüer-Patowsky K, Jansson T, Põlme S, Ghobad-Nejhad M, Corcoll N, Scharn R, Sánchez-García M, Khomich M, Wurzbacher C, Nilsson RH (2022) The curse of the uncultured fungus. MycoKeys 86: 177-194. https://doi.org/10.3897/mycokeys.86.76053
Figure 1 A screenshot from species hypothesis SH1159264.08FU (Vishniacozyma victoriae; https://dx.doi.org/10.15156/BIO/SH1159264.08FU) in UNITE. Identifying a Vishniacozyma victoriaeITS sequence to at least the genus level is trivial, yet the screenshot hints at the swathes of kingdom level-annotated Vishniacozyma victoriae sequences regularly deposited in the INSDC. SequenceID – INSDC accession number. UNITE taxon name – taxonomic annotation in UNITE. INSD taxon name – original taxonomic annotation in INSDC. RefSeq – indicates a type-derived sequence. More than thirty studies have deposited kingdom-level annotations in this species hypothesis. The ones shown primarily stem from Nishizawa et al. (2010).
Figure 6 from: Xie D-F, Cheng R-Y, Price M, Chen J-P, Lei J-Q, Zhang Y-Y, He X-J (2022) Allium heterophyllum (Amaryllidaceae), a new species from Henan, China. PhytoKeys 190: 53-67. https://doi.org/10.3897/phytokeys.190.77449
Figure 6 Phylogenetic relationships inferred from three cpDNA alignments. Trees constructed with maximum likelihood (ML) and Bayesian inference (BI). Support values reported above the branches are bootstrap values of ML and posterior probability of BI. * = maximum support in the two analyses. Branches of Allium sect. Rhizirideum are in rose red and the samples of Allium heterophyllum are in red and markered with the star.
Figure 2 from: Xie D-F, Cheng R-Y, Price M, Chen J-P, Lei J-Q, Zhang Y-Y, He X-J (2022) Allium heterophyllum (Amaryllidaceae), a new species from Henan, China. PhytoKeys 190: 53-67. https://doi.org/10.3897/phytokeys.190.77449
Figure 2 Morphological characters of Allium heterophyllumA, D single flower with light purple or white color B, E outer (left) and inner (right) tepals C, F inner (top) and outer (bottom) tepals and stamen G stamen and trait at the base H ovary I cross-section of ovary showing the carpels J–L the cross-section of leaf showing the blade characters M cross-section of rhomboid scapes N seeds' characters.
Supplementary material 1 from: Xie D-F, Cheng R-Y, Price M, Chen J-P, Lei J-Q, Zhang Y-Y, He X-J (2022) Allium heterophyllum (Amaryllidaceae), a new species from Henan, China. PhytoKeys 190: 53-67. https://doi.org/10.3897/phytokeys.190.77449
Table S1
Figure 1 from: Xie D-F, Cheng R-Y, Price M, Chen J-P, Lei J-Q, Zhang Y-Y, He X-J (2022) Allium heterophyllum (Amaryllidaceae), a new species from Henan, China. PhytoKeys 190: 53-67. https://doi.org/10.3897/phytokeys.190.77449
Figure 1 Living images of Allium heterophyllumA habitat, growing on the open slope of rock B, C inflorescence, light purple with loose flowers D bulb with the horizontal rhizome.
Figure 5 from: Xie D-F, Cheng R-Y, Price M, Chen J-P, Lei J-Q, Zhang Y-Y, He X-J (2022) Allium heterophyllum (Amaryllidaceae), a new species from Henan, China. PhytoKeys 190: 53-67. https://doi.org/10.3897/phytokeys.190.77449
Figure 5 Phylogenetic relationships inferred from ITS. Trees constructed with maximum likelihood (ML) and Bayesian inference (BI). Support values reported above the branches are bootstrap values of ML and posterior probability of BI. * = maximum support in the two analyses. Samples of Allium sect. Rhizirideum are in rose red and the sequences of Allium heterophyllum are in red and markered with the star.
Supplementary material 1 from: Van De Walle R, Massol F, Vandegehuchte ML, Bonte D (2022) The distribution and impact of an invasive plant species (Senecio inaequidens) on a dune building engineer (Calamagrostis arenaria). NeoBiota 72: 1-23. https://doi.org/10.3897/neobiota.72.78511
Tables S1, S2, Figures S1, S2
Figure 2 from: Haupt TM, Ceasar J, Stefanoudis P, von der Meden C, Payne RP, Adams LA, Anders DR, Bernard AT, Coetzer W, Florence WK, Janson LA, Johnson AS, Juby R, Kock AA, Langenkämper D, Nadjim AM, Parker D, Samaai T, Snyders LB, Upfold L, van der Heever GM, Williams LL (2022) The WIO Regional Benthic Imagery Workshop: Lessons from past IIOE-2 expeditions. Research Ideas and Outcomes 8: e81563. https://doi.org/10.3897/rio.8.e81563
Figure 2 Specimen plate of benthic invertebrates collected via dredge sampling on the IIOE-2 expeditions of 2017/2018. Shown here are a diverse range of taxa - Crustacea, Bryozoa, Brachiopoda, Porifera, Cnidaria, Echinodermata and Mollusca.
Figure 3 from: Haupt TM, Ceasar J, Stefanoudis P, von der Meden C, Payne RP, Adams LA, Anders DR, Bernard AT, Coetzer W, Florence WK, Janson LA, Johnson AS, Juby R, Kock AA, Langenkämper D, Nadjim AM, Parker D, Samaai T, Snyders LB, Upfold L, van der Heever GM, Williams LL (2022) The WIO Regional Benthic Imagery Workshop: Lessons from past IIOE-2 expeditions. Research Ideas and Outcomes 8: e81563. https://doi.org/10.3897/rio.8.e81563
Figure 3 Increasing complexity and cost of visual sampling equipment; the operational requirements for deployment of the equipment, from small craft to large research vessels; and the technical and legal requirements for operators. Photographic credit (Left to Right): Department of Forestry, Fisheries and the Environment (South Africa); Jeanne Mortimer (Island Conservation Society, Seychelles); 3) South African Institute for Aquatic Biodiversity (SAIAB); 4) South African Environmental Observation Network (SAEON); 5) SAIAB; 6) Nekton.
Figure 1 from: Haupt TM, Ceasar J, Stefanoudis P, von der Meden C, Payne RP, Adams LA, Anders DR, Bernard AT, Coetzer W, Florence WK, Janson LA, Johnson AS, Juby R, Kock AA, Langenkämper D, Nadjim AM, Parker D, Samaai T, Snyders LB, Upfold L, van der Heever GM, Williams LL (2022) The WIO Regional Benthic Imagery Workshop: Lessons from past IIOE-2 expeditions. Research Ideas and Outcomes 8: e81563. https://doi.org/10.3897/rio.8.e81563
Figure 1 A map of the representative countries, of which 231 out of the 266 participants (i.e. 87%) were from the Western Indian Ocean. Source: L Williams, DFFE.
Figure 5 from: Yu C, Zhang D, Zhang R, Wang C (2022) New psychropotid species (Echinodermata, Holothuroidea, Elasipodida) of the Western Pacific with phylogenetic analyses. ZooKeys 1088: 99-114. https://doi.org/10.3897/zookeys.1088.69141
Figure 5 A, BPsychropotes verrucicaudatus Xiao, Gong, Kou & Li, 2019 (RSIO6018004) in situ C, D specimen (RSIO6018004) before preservation E, F red arrows point to the giant ossicles, specimen (RSIO6018004) after preservation in 10% seawater formalin. Scale bars: 5 cm (A–E); 1 cm (F).
Figure 1 from: Yu C, Zhang D, Zhang R, Wang C (2022) New psychropotid species (Echinodermata, Holothuroidea, Elasipodida) of the Western Pacific with phylogenetic analyses. ZooKeys 1088: 99-114. https://doi.org/10.3897/zookeys.1088.69141
Figure 1 Red dots show the location of Benthodytes jiaolongi sp. nov. and green dots indicate the location of Psychropotes verrucicaudatus Xiao, Gong, Kou & Li, 2019.
Figure 2 from: Yu C, Zhang D, Zhang R, Wang C (2022) New psychropotid species (Echinodermata, Holothuroidea, Elasipodida) of the Western Pacific with phylogenetic analyses. ZooKeys 1088: 99-114. https://doi.org/10.3897/zookeys.1088.69141
Figure 2 A, BBenthodytes jiaolongi sp. nov. (RSIO3710601, holotype) in situ on the seamount Weijia Guyot C specimen (RSIO6017101, paratype) in situ on the Kyushu-Palau Ridge D specimen (paratype) before preservation in 10% seawater formalin.
Figure 4 from: Yu C, Zhang D, Zhang R, Wang C (2022) New psychropotid species (Echinodermata, Holothuroidea, Elasipodida) of the Western Pacific with phylogenetic analyses. ZooKeys 1088: 99-114. https://doi.org/10.3897/zookeys.1088.69141
Figure 4 A–C scanning electron micrographs of dorsal body wall ossicles from Benthodytes jiaolongi sp. nov., RSIO590506 D–F dorsal body wall ossicles from Benthodytes jiaolongi sp. nov., RSIO6017101 G–J ossicles of tentacles.
Figure 8 from: Yu C, Zhang D, Zhang R, Wang C (2022) New psychropotid species (Echinodermata, Holothuroidea, Elasipodida) of the Western Pacific with phylogenetic analyses. ZooKeys 1088: 99-114. https://doi.org/10.3897/zookeys.1088.69141
Figure 8 Bayesian inference (BI) and maximum likelihood (ML) trees based on the concatenated sequences. The Bayesian posterior probabilities (BI) and Maximum likelihood bootstrap (BS) values are shown as BI/ML at each node. Scale bar indicates the evolutionary branch length.
Figure 7 from: Yu C, Zhang D, Zhang R, Wang C (2022) New psychropotid species (Echinodermata, Holothuroidea, Elasipodida) of the Western Pacific with phylogenetic analyses. ZooKeys 1088: 99-114. https://doi.org/10.3897/zookeys.1088.69141
Figure 7 Psychropotes verrucicaudatus ossicle from A–C ventral body wall D–G dorsal body wall H–K brim L–R tentacle.
Supplementary material 1 from: Hatami R, Inglis G, Lane SE, Growcott A, Kluza D, Lubarsky C, Jones-Todd C, Seaward K, Robinson AP (2022) Modelling the likelihood of entry of marine non-indigenous species from internationally arriving vessels to maritime ports: a case study using New Zealand data. NeoBiota 72: 183-203. https://doi.org/10.3897/neobiota.72.77266
Supplementary materials
Supplementary material 1 from: Weigand AM, Bücs S-L, Deleva S, Lukić Bilela L, Nyssen P, Paragamian K, Ssymank A, Weigand H, Zakšek V, Zagmajster M, Balázs G, Barjadze S, Bürger K, Burn W, Cailhol D, Decrolière A, Didonna F, Doli A, Drazina T, Dreybrodt J, Ðud L, Egri C, Erhard M, Finžgar S, Fröhlich D, Gartrell G, Gazaryan S, Georges M, Godeau J-F, Grunewald R, Gunn J, Hajenga J, Hofmann P, Knight LRFD, Köble H, Kuharic N, Lüthi C, Munteanu CM, Novak R, Ozols D, Petkovic M, Stoch F, Vogel B, Vukovic I, Hall Weberg M, Zaenker C, Zaenker S, Feit U, Thies J-C (2022) Current cave monitoring practices, their variation and recommendations for future improvement in Europe: A synopsis from the 6th EuroSpeleo Protection Symposium. Research Ideas and Outcomes 8: e85859. https://doi.org/10.3897/rio.8.e85859
Questionnaire for the 6th EuroSpeleo Protection Symposium 2022
Supplementary material 1 from: Benda D, Pohl H, Nakase Y, Beutel R, Straka J (2022) A generic classification of Xenidae (Strepsiptera) based on the morphology of the female cephalothorax and male cephalotheca with a preliminary checklist of species. ZooKeys 1093: 1-134. https://doi.org/10.3897/zookeys.1093.72339
Table S1
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.