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553 results for “soil communities”
GeoChip and environmental data of soil microbial communities of three subtropical broad-leaved forests
GEO Series GSE165723. soil metagenome. 27 samples. Type: Other.
Antagonistic interactive effects of CO2 and nitrogen on microbial community enhance the persistence of soil C storage
GEO Series GSE98512. Bacteria; Eukaryota; Viruses; soil metagenome; Archaea. 296 samples. Type: Other.
A comprehensive study to understand the effects of soil type, soil transplant and landuse changes on soil microbial community and its feedback responses
GEO Series GSE77546. Bacteria; uncultured bacterium. 81 samples. Type: Other.
The Taxonomic and Metabolic Potential Susceptibility of Microbial Community to Aeolian Grassland Soil Erosion and Deposition
GEO Series GSE67347. Archaea; uncultured bacterium; Bacteria; Eukaryota; Viruses. 30 samples. Type: Other.
Geochip data of soil microbial community of biomes from three termperature zones
GEO Series GSE172195. uncultured soil microorganism; soil metagenome. 120 samples. Type: Other.
Microbial communities of vineyard BRO11-BRO12 soils (GeoChip)
GEO Series GSE146289. Fungi; Bacteria; Viruses; soil metagenome; Archaea. 6 samples. Type: Genome variation profiling by array.
soil mcirobial functional communities
GEO Series GSE135153. Archaea; Bacteria; Eukaryota; Viruses; uncultured soil microorganism. 15 samples. Type: Genome variation profiling by array.
Plant and bird presence strongly influences the microbial communities in soils of Admiralty Bay, Maritime Antarctica
GEO Series GSE33847. Bacteria; Archaea. 47 samples. Type: Other.
Supplemental information Table S10, S11 and S 17 for 'The impact of differential temperatures (30°C versus 45°C) on the methanogenic community in Philippine rice field soil'
<p>Supplemental information Table S10, S11, and S17 </p> <p>for Xin Li's PhD thesis-'The impact of differential temperatures (30°C versus 45°C) on the methanogenic community in Philippine rice field soil'</p>
Maize phenotypic traits evaluated under synergistic influence of native soil microbial communities (dilution-to-extinction) and biostimulant Azospirillum brasilense Ab-V5
<p>Maize phenotypic traits evaluated under synergistic influence of native soil microbial communities (dilution-to-extinction) and biostimulant Azospirillum brasilense Ab-V5.</p>
Inter-annual precipitation variability alters the effects of soil resource enrichment and mycorrhizal suppression on plant communities in desert steppe
<p><strong>Questions:</strong> In desert steppes, plant community productivity and species composition are primarily co-limited by soil water and nitrogen availability. However, how the addition of resources and arbuscular mycorrhizal fungi interactively influence plant community performance has not been investigated in detail.</p> <p><strong>Location: </strong>Desert steppe, China.</p> <p><strong>Methods:</strong> We performed a field study to examine the effects of levels of increased water, nitrogen and arbuscular mycorrhizal (AM) fungal suppression on plant communities in 2 year with contrasting inter-annual precipitation variability in desert steppe.</p> <p><strong>Results:</strong> We found that inter-annual precipitation variability altered plant community composition and productivity in responses to water and nitrogen addition and mycorrhizal suppression. AM fungal suppression had few effects on aboveground plant productivity, whereas the primary effects of water and nitrogen addition were significant across all two years. The addition of water and nitrogen altered plant community composition and productivity primarily by increasing the abundance and biomass of annual species only in normal year (2019), but decreasing the abundance of perennial grasses regardless of the presence of AM fungi across two years with contrasting precipitation conditions. Moreover, the addition of water alone slightly increased the species richness and Shannon diversity compared with the control.</p> <p><strong>Conclusions:</strong> Our findings highlight the importance of inter-annual precipitation variability rather than that of soil resource enrichment and plant–arbuscular mycorrhizal fungi interactions in plant community composition within the desert steppe.</p>
Supplemental tables for 'The impact of differential temperatures (30°C versus 45°C) on the methanogenic community in Philippine rice field soil'
<p>Supplemental tables for Xin Li's PhD thesis-'The impact of differential temperatures (30°C versus 45°C) on the methanogenic community in Philippine rice field soil'</p>
Impacts of invasive Australian acacias on soil bacterial community composition, microbial enzymatic activities, and nutrient availability in fynbos soils
<p>Invasive nitrogen-fixing plants often impact the soils they invade, notably through changes in soil chemistry and microbial community composition, which in turn could lead to alterations in soil functionality. We aimed to determine the impacts that invasive Australian <i>Acacia </i>trees have on soil chemistry and function (carbon, nitrogen, and phosphorus cycling) in South Africa's Core Cape Subregion, and whether any differences in soil function are linked to differences in soil chemical properties and bacterial community composition between neighbouring acacia-invaded and uninvaded sites. We do so by using Next Generation Sequencing (NGS) methods together with soil chemistry and soil enzyme functioning profiles. Acacias significantly increased levels of soil nitrogenous compounds (NO<sub>3</sub><sup>-</sup>, NH<sub>4</sub><sup>+</sup>, and total N), C, and pH. Acacias also significantly elevated microbial phosphatase activity, but not β-glucosidase, while having contrasting effects on urease. Acacia-induced changes in soil chemical properties were correlated with changes in enzyme activities for both urease and phosphatase. Changes in soil bacterial community composition due to the presence of invasive acacias were also correlated with phosphatase enzymatic activity. While we found evidence for acacias altering soil function by changing soil chemical properties and bacterial community composition, the legume-soil feedbacks underlying these impacts appear to be context specific.</p>
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.