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13,117 results for “Maps”
Test data for running snakePipes : DNA-mapping workflow
<p><strong>Test files for running snakePipes workflows</strong></p> <p><strong>snakePipes</strong> are pipelines built using snakemake and python for the analysis of epigenomic datasets. Please refer to <a href="https://snakepipes.readthedocs.io/en/latest/">this link</a> for further information on snakePipes.</p> <p>This folder contains test files that can be used to run DNA-mapping workflow under snakePipes. To test the workflow, follow the following steps : </p> <ul> <li>Download or prepare genome fasta, indices and annotations for human (<strong>hg38</strong>) genome.</li> <li>Download and install snakePipes via `conda create -n snakePipes -c mpi-ie -c bioconda -c conda-forge snakePipes`</li> <li>Update <a href="https://snakepipes.readthedocs.io/en/latest/content/running_snakePipes.html#genome-configuration-file">Genome configuration file</a> with path to indices and annotations.</li> <li>Move to this repository and run the example <strong>command.sh</strong></li> </ul>
Figures 78–79. Distribution maps for Beltia spp. 78 in A review of the genus Beltia Jacoby (Chrysomelidae: Eumolpinae: Eumolpini), with descriptions of fourteen new species from Costa Rica, Panama, and northwestern South America
Figures 78–79. Distribution maps for Beltia spp. 78) Northwestern South America: B. confusa (star), B. gorgona (inverted triangles), B. placidula (blue circles), B. rugosa (red circle), B. weyrauchi (square). 79) Ecuador: B. awapita (hexagon), B. ledesmae (squares), B. napoensis (triangles), B. talaga (circle), B. tsachila (star).
Maps 37–48 in New state records for Coniopterygidae (Neuroptera) with an updated list of species in North America north of Mexico
Maps 37–48. State-level distribution of Coniopterygidae spp. 37) Coniopteryx canadensis. 38) Coniopteryx diversicornis. 39) Coniopteryx meinanderi. 40) Conwentzia texana. 41) Conwentzia barretti. 42) Conwentzia californica. 43) Conwentzia pineticola. 44) Conwentzia psociformis. 45) Parasemidalis fuscipennis. 46) Semidalis angusta. 47) Semidalis arnaudi. 48) Semidalis bituberculata.
Maps 13–24 in New state records for Coniopterygidae (Neuroptera) with an updated list of species in North America north of Mexico
Maps 13–24. State-level distribution of Coniopterygidae spp. 13) Aleuropteryx vulgaris. 14) Bidesmia werneri. 15) Helicoconis morrisoni. 16) Helicoconis californica. 17) Helicoconis lutea. 18) Helicoconis similis. 19) Helicoconis walshi. 20) Heteroconis picticornis. 21) Neoconis bifurcata. 22) Neoconis inexpectata. 23) Neoconis marginata. 24) Coniopteryx californica.
Mercury's crustal thickness correlates with lateral variations in mantle melt production: Dataset for maps of surface density, degree of partial melting, and crustal thickness
<p>1) DensityGrid.dat = map of density of pore-free surface rocks (Figure 1a)</p> <p>- Units = g/cm3</p> <p>- 720 x 1440 pixels corresponding to 0.25-degree pixels in an equirectangular cylindrical projection with the equator as central parallel.</p> <p>- The first row represents 90 to 89.75 degrees of latitude north; the last row represents 89.75 to 90 degrees of latitude south.</p> <p>- The first column represents 0 to 0.25 degree of longitude; the last column represents 359.75 to 360 degrees of longitude.</p> <p>2) MeltGrid.dat = map of degree of partial melting (Figure S1a)</p> <p>- Units: mass fraction</p> <p>- 720 x 1440 pixels as described above</p> <p>3) CrustalThickness_ModelU0.dat = map of crustal thickness if laterally uniform density, Model U0 (Figure 2a)</p> <p> CrustalThickness_ModelVn.dat = map of crustal thickness if laterally variable density, Model Vn (Figure 2c, Figures S6 to S10)</p> <p>- Units = km</p> <p>- generated with MakeGridDH of SHTOOLS (<a href="https://shtools.github.io/SHTOOLS/">https://shtools.github.io/SHTOOLS/</a>)</p> <p>- 720 x 1440 coordinate points corresponding to 0.25-degree spacing in an equirectangular cylindrical projection with the equator as central parallel.</p> <p>- The first row corresponds to 90 degrees of latitude north; the last row corresponds to 89.75 degrees of latitude south.</p> <p>- The first column corresponds to 0 degree of longitude; the last column corresponds to 359.75 degrees of longitude.</p> <p>Note: Figures refer to the following paper (Geophysical Research Letters, 2020): `Mercury's crustal thickness correlates with lateral variations in mantle melt production’, by M. Beuthe, B. Charlier, O. Namur, A. Rivoldini, and T. Van Hoolst</p>
Excel mapping tools for 2019 zoonoses data reporting
<p>The main objective of the mapping tools is to provide a simple and useable platform for Member states and other reporting countries to map their country-specific standard terminology to that used by EFSA and to enable the production of an XML file for the submission of sample or aggregated-based zoonoses monitoring data via the Data Collection Framework (DCF).</p> <p>The catalogues and the specific hierarchy of each data model (AMR, ESBL, PRV, FBO, POP, DST and SSD2 for Echinococcus multilocularis) are already inserted into each of the specific mapping tool. Specific Excel mapping tools correspond to each of the seven data models are available.</p> <p>You can choose between the dynamic or the manual version of the tool for the first six data models.</p> <p>The Emulti_SSD2_tool can be used to report sample-based results of Echinococcus multilocularis under the Commission Delegated Regulation (EU) 2018/772.</p>
Map 1 in New species and additional records of Ischnosoma from Georgia (Coleoptera, Staphylinidae, Tachyporinae)
Map 1: Distributions of the species allied to Ischnosoma solodovnikovi and of I. thoracicum: I. solodovnikovi (white triangles), I. molle (black circles; white circle: doubtful female-based record), I. acre (black triangles), and I thoracicum (white star.
Figure 1.1. Site map for Tyrannosaurus rex discoveries. See text and Table 1.1 in One Hundred Years of Tyrannosaurus rex: The Skeletons
Figure 1.1. Site map for Tyrannosaurus rex discoveries. See text and Table 1.1 for number identification.
Map 1 in Five new species oI Chinecallicerus Irom China (Coleoptera, Staphylinidae, Aleocharinae, Geostibini)
Map 1: Distributions of Chinecallicerus species in China: C. granulosissimus (white circle); C. formidabilis (black circle); C. wrasei (white star); C. glabriventris (black star); C. reuteri (white triangle); C. feldmanni (white triangle); C. discrepans (black triangle).
Map 1 in A revision of Palaearctic and Oriental Rugilus. VI. Two new species Irom China, a new synonymy, and additional records (Coleoptera, Staphylinidae, Paederinae)
Map 1: Distributions of the species of the Rugilus malaisei group: R. malaisei (black circle); R. desectus (white circle); R. gryps (black diamond); R. aquilinus (white diamond); R. asperrimus (black star); R. wuyicus (white star).
Aphrodite Region of Venus (I-2476): base maps for geologic mapping.
<p>This data repository contains the base map for the geologic mapping of the Aphrodite Region of Venus (I-2476). Data for this study were provided by the U.S. Geological Survey (USGS) Astrogeology Team in the projection parameters (Mercator projection). The data are also available online from the USGS Map-a-planet website (<a href="https://astrocloud.wr.usgs.gov/">https://astrocloud.wr.usgs.gov/</a> ).</p> <p>The datasets include: (a) Cycle 1 (east-directed illumination, or left-looking) SAR images cover essentially the entire I-2476 map area; (b) Topography (Global Topographic Data Record 3; GTDR 3); (c) Slope data (Global Slope Data Record; GSDR); (d) Reflectivity (Global Reflectivity Data Record; GRDR); and (e) Emissivity (Global Emissivity Data Record; GEDR).</p>
Map 3 in A revision of Geostiba of the West Palaearctic region. XXVI. New species and additional records, primarily from the Caucasus region (Coleoptera: Staphylinidae: Aleocharinae)
Map 3: Distributions of species of the subgenus Sipalotricha in the Caucasus region, based on examined records: G. cingulata (black circles); G. manca (white stars).
Map 1 in A revision of Geostiba of the West Palaearctic region. XXVI. New species and additional records, primarily from the Caucasus region (Coleoptera: Staphylinidae: Aleocharinae)
Map 1: Distributions of the species of the subgenus Tropogastrosipalia in the Caucasus region, based on examined records: G. reducta (black star); G. defecta (black diamond); G. svanetica (white square); G. gibberiventris (black square); G. tiflisensis (white diamonds); G. artvinensis (white circles); G. pontica (black triangle); G. solodovnikovi (white triangle); G. priva (white star); G. khnzoriani (black circles).
A dataset of long-term consistency values of resting-state fMRI connectivity maps in a single individual derived at multiple sites and vendors using the Canadian Dementia Imaging Protocol
<p>This dataset contains preprocessed resting state fMRI data (.nii.gz) with accompanying confound files (.tsv) from the Single Individual volunteer for Multiple Observations across Networks (SIMON; http://fcon_1000.projects.nitrc.org/indi/retro/SIMON.html) dataset that has been minimally preprocessed using the NeuroImaging Analysis Kit (NIAK; http://niak.simexp-lab.org/build/html/PREPROCESSING.html). Preprocessing steps included: (1) Slice timing correction; (2) Estimation of rigid-body motion in fMRI runs, both within- and between sessions; (3) Linear or non-linear coregistration of the structural scan in stereotaxic space; (4) Individual coregistration between structural and functional scans; (5) Resampling of functional scans in stereotaxic space. Confound files (.tsv) have been included for purposes of scrubbing and regression of confounds using NIAK or other analysis software, allowing for further processing without conflicts.</p>
Fig. 19. Distribution maps. A in Synopsis of Lasioglossum (Dialictus) Robertson, 1902 (Hymenoptera, Apoidea, Halictidae) in Japan, the Korean Peninsula and Taiwan
Fig. 19. Distribution maps. A. Lasioglossum (Dialictus) problematicum (Blüthgen, 1923) in Japan. B. Lasioglossum (Dialictus) alishanense Murao sp. nov.
Maps 9-10 in The genus Leptostylopsis of Hispaniola (Coleoptera, Cerambycidae, Acanthocinini)
Maps 9-10. Locality records for Leptostylopsis chlorescens Lingafelter & Micheli, Leptostylopsis puntacanaensis Lingafelter & Micheli, and Leptostylopsis humerofulvus Lingafelter & Micheli in Hispaniola.
Maps 11-12 in The genus Leptostylopsis of Hispaniola (Coleoptera, Cerambycidae, Acanthocinini)
Maps 11-12. Locality records for Leptostylopsis perfasciatus Lingafelter & Micheli and Leptostylopsis thomasi Lingafelter & Micheli in Hispaniola.
Map 1 in A survey of East Palaearctic Hersiliola Thorell, 1870 (Araneae, Hersiliidae), with a description of three new genera
Map 1. Distribution of Hersiliidae in Central Asia. ' Hersiliola afghanica; × Hersiliola esyunini; • Hersiliola foordi; · Hersiliola lindbergi; • Hersiliola sternbergsi; + Hersiliola xinjiangensis; ′ Duninia baehrae; ‵ Duninia rheimsae;. Deltshevia danovi; * Deltshevia gromovi; - Ovtsharenkoia pallida; -? identity uncertain
Fig. 2. Distribution maps. A in Description of 11 new Astiella (Spermacoceae, Rubiaceae) species endemic to Madagascar
Fig. 2. Distribution maps. A. Astiella antongilensis Groeninckx sp. nov. B. A. antsalovansis Groeninckx sp. nov. C. A. confusa Groeninckx sp. nov. D. A. deblockiae Groeninckx sp. nov. E. A. delicatula Jovet. F. A. desseinii Groeninckx sp. nov. G. A. homolleae Groeninckx sp. nov. H. A. latifolia Groeninckx sp. nov. I. A. longifimbria Groeninckx sp. nov. J. A. perrieri Groeninckx sp. nov. K. A. pulla Groeninckx sp. nov. L. A. tsaratanensis Groeninckx sp. nov.
Fig. 12. Distribution maps. A in Giant Sticks from Vietnam and China, with three new taxa including the second longest insect known to date (Phasmatodea, Phasmatidae, Clitumninae, Pharnaciini)
Fig. 12. Distribution maps. A. Phryganistria bachmaensis (Ta & Hoang, 2004) comb. nov. and P. heusii heusii (Hennemann & Conle, 1997). B. P. tamdaoensis sp. nov. and P. grandis Rehn, 1906. C. Phryganistria heusii yentuensis subsp. nov. and Phobaeticus trui sp. nov. D. Baculonistria magna (Brunner von Wattenwyl, 1907) comb. nov.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.