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Figure 26 in A revision of the egg-eating snakes of the genus Dasypeltis Wagler (Squamata: Colubridae: Colubrinae) in north-eastern Africa and south-western Arabia, with descriptions of three new species
Figure 26. Keren, Eritrea—type locality of Dasypeltis crucifera sp. nov. (Photo: T. Mazuch)
Figure 22 in A revision of the egg-eating snakes of the genus Dasypeltis Wagler (Squamata: Colubridae: Colubrinae) in north-eastern Africa and south-western Arabia, with descriptions of three new species
Figure 22. Habitat of Dasypeltis abyssina south of Gondar, northern Ethiopia. (Photo: T. Mazuch)
Figure 34 in A revision of the egg-eating snakes of the genus Dasypeltis Wagler (Squamata: Colubridae: Colubrinae) in north-eastern Africa and south-western Arabia, with descriptions of three new species
Figure 34. Discriminant Function Analysis of the genus Dasypeltis in the Horn of Africa and Egypt.
Figure 15 in A revision of the egg-eating snakes of the genus Dasypeltis Wagler (Squamata: Colubridae: Colubrinae) in north-eastern Africa and south-western Arabia, with descriptions of three new species
Figure 15. Haud, Somaliland—type locality of Dasypeltis taylori sp. nov. (Photo: T. Mazuch)
Figure 14 in A revision of the egg-eating snakes of the genus Dasypeltis Wagler (Squamata: Colubridae: Colubrinae) in north-eastern Africa and south-western Arabia, with descriptions of three new species
Figure 14. Dasypeltis taylori sp. nov. Paratype (MNHN 1884.0707) from Djibouti. (Photo: I. Ineich)
Manual Dependency Annotation of Three German Text Extracts from the Project hermA (Gold Standard Data)
<p>This dataset was created in the digital humanities project hermA (www.herma.uni-hamburg.de) and comprises annotated extracts of the following three texts:</p> <ul> <li>Modern literature (Lit2009): novel <em>Corpus Delicti: Ein Prozess </em>by German author Juli Zeh, published in Frankfurt/Main in 2009.</li> <li>Non-contemporary literature (Lit1850):<em> Eine Frauenfahrt um die Welt </em>('A woman’s journey around the world') by Austrian author Ida Pfeiffer (1850). Full text available at Deutsches Textarchiv: http://www.deutschestextarchiv.de/pfeiffer_frauenfahrt01_1850/6.</li> <li>Modern academic writing (Aca2009): <em>Stand, Möglichkeiten und Grenzen der Telemedizin in Deutschland</em> ('Telemedicine in Germany: status, chances and limits') by Rüdiger Klar and Ernst Pelikan, published in Bundesgesundheitsblatt ('Federal Health Gazette') in 2009. DOI 10.1007/s00103-009-0787-7.</li> </ul> <p>The texts are annotated for part-of-speech and dependency syntax and are made available in CoNLL file format. We describe the annotation process and report inter-annotator agreements in:</p> <p>Adelmann, Benedikt, Melanie Andresen, Wolfgang Menzel & Heike Zinsmeister. 2018. Evaluation of Out-Of Domain Dependency Parsing for its Application in a Digital Humanities Project. <em>Proceedings of the 14th Conference on Natural Language Processing (KONVENS 2018)</em>. Vienna, Austria.</p>
Fig. 6 in On the genus Pachygnatha (Araneae, Tetragnathidae) in the Albertine Rift of Burundi, with the description of three new species
Fig. 6. Distribution map of Pachygnatha procincta Bosmans & Bosselaers, 1994.
Physiological parameters for four fish species (rainbow trout, zebra fish, fathead minnow and three-spined stickleback) as the basis for the development of generic physiologically-based kinetic models
<p>This excel file (DOI: 10.5281/zenodo.1414332) provides physiological parameters and their inter-individual variability (mean, coefficient of variation, sample size) for four fish species: rainbow trout (<em>Onchorhynchus mykiss</em>), zebrafish (<em>Danio rerio</em>), fathead minnow (<em>Pimephales promelas</em>), and three-spined stickleback (<em>Gasterosteus aculeatus</em>). These physiological parameters were estimated based on the results of extensive literature searches and specific experimental data described in Grech et al., (2018). </p> <p>This file is associated with R codes (DOI: 10.5281/zenodo.1414332) for generic PB-K models, partition coefficient Quantitative Structure Activity Relationship (QSAR) models for each fish species and parameterisation of model for males and females of each species separately.</p> <p>The full data collection and implementation of the models using case studies are described in Grech et al., 2018 (<a href="https://doi.org/10.1016/j.scitotenv.2018.09.163">https://doi.org/10.1016/j.scitotenv.2018.09.163</a>)</p>
Shutting Down Shigella Secretion: Characterizing Small Molecule Type Three Secretion System ATPase Inhibitors
<p>Spa47 inhibition data from "Shutting Down <em>Shigella</em> Secretion: Characterizing Small Molecule Type Three Secretion System ATPase Inhibitors".</p>
Fig. 8 in Three new species of Willowsia (Collembola: Entomobryidae) from Guizhou Province, China
Fig. 8. Willowsia tanae sp. nov. A̅C. Habitus. Scale bars: 500 μm.
Fig. 5 in Three new species of Willowsia (Collembola: Entomobryidae) from Guizhou Province, China
Fig. 5. Willowsia christianseni sp. nov. A–B. Habitus. Scale bars: 500 μm.
Fig. 1 in Three new species of Willowsia (Collembola: Entomobryidae) from Guizhou Province, China
Fig. 1. Willowsia sexachaeta sp. nov. A−B. Habitus. Scale bars: 500 μm.
Ptychographic X-ray computed tomography data for three Portland cement pastes
<p>Mortars and concretes are ubiquitous materials with very complex hierarchical microstructures. To fully understand their main properties and to decrease their CO<sub>2</sub> footprints, a sound description of their (spatially-resolved) mineralogy is compulsory. Developing this knowledge is very challenging as about half of the volume of hydrated cement is a nanocrystalline component, calcium-silicate-hydrate (C-S-H gel). Furthermore, other poorly crystalline phases (e.g. iron-siliceous hydrogarnet or silica oxide) may coexist which are even more difficult to characterise. Traditional spatially-resolved techniques like electron microscopies involve complex sample preparation steps that often lead to artefacts (e.g. dehydration and microstructural changes). Here, we have used synchrotron ptychographic tomography for obtaining spatially-resolved information on three unaltered representative samples: neat Portland paste, Portland-calcite and Portland-fly ash blend pastes with spatial resolution below 100 nm in samples of up to 5×10<sup>4</sup> mm<sup>3</sup> of volume. For the neat Portland paste, the ptychotomographic study gave densities of 2.11 and 2.52 gcm<sup>-3</sup> and contents of 41.1 and 6.4 vol% for nanocrystalline C-S-H gel and poorly crystalline iron-siliceous hydrogarnet, respectively. Furthermore, the spatially-resolved volumetric mass density information has allowed to characterise inner product and outer product C-S-H gels. The average density of inner product C-S-H is smaller than that of outer product and its variability larger. Full characterisation of the pastes, including segmentation of the different components, is reported and the contents are compared with the results obtained by thermodynamical modelling.</p> <p> </p> <p> </p> <p> </p> <p>Ptychographic X-ray computed tomography provides 3D electron mass density and attenuation coefficient distributions of unaltered cement pastes with an isotropic resolution below 100 nm. This imaging technique allows quantitatively distinguishing between different components with very similar absorption contrast.</p> <p>Samples were measured at the cSAXS beamline: i) a neat Portland Cement (PC); ii) a PC-CC blend: 80 wt% of PC and 20 wt% of CaCO<sub>3</sub>, and iii) a PC-FA blend: 70 wt% of PC and 30 wt% of fly ash. The main aim of this study is to have a better insight of the microstructure of the amorphous/nanocrystalline gels with submicrometer spatial resolution. It is worth noting that it is possible to determine the gel mass density and water content within the attained 3D resolution (about 100 nm).</p> <p>Here, we focused on the spatial distribution of the different components and in the variation of the electron density values which are very related to the mass density values. Special attention is paid to the density values of the amorphous (or nanocrystalline) components. The electron and mass density values of the C-S-H gel for three pastes are thoroughly analyzed. The density values range from 2.05-2.10 g·cm<sup>-3</sup> for high density C-S-H gel for neat PC and PC-CC pastes to 1.80 g<sup>.</sup>cm<sup>-3</sup> for low density C-S-H gel in PC-FA paste. The density value of poorly crystalline iron-siliceous hydrogarnet component, r=2.52 g·cm<sup>-3</sup>, has also been determined.</p> <p>A summary of our ongoing research focused on the analyses of cement pastes by synchrotron PXCT is reported and discussed.</p> <p> </p> <p> </p> <p> </p> <p><strong>PC sample:</strong></p> <p>tomo_beta_S02536_to_S03341_Hann_freqscl_0.35_0xxx</p> <p>tomo_delta_S02536_to_S03341_Hann_freqscl_1.00_0xxx</p> <p> </p> <p><strong>PC-CC sample:</strong></p> <p>tomo_beta_S04692_to_S06001_Hann_freqscl_0.35_0xxx</p> <p>tomo_delta_S04692_to_S06001_Hann_freqscl_1.00_0xxx</p> <p> </p> <p><strong>PC-FA sample:</strong></p> <p>tomo_beta_S03351_to_S04661_Hann_freqscl_0.35_0xxx</p> <p>tomo_delta_S03351_to_S04661_Hann_freqscl_1.00_0xxx</p> <p> </p> <p> </p>
Systematic spatio-temporal mapping reveals divergent cell death pathways in three mouse models of hereditary retinal degeneration
<p>Values for immuohistochemical analysis or enzymatic analysis of various markers theorised to have roles in retinal dystrophies in three models of mouse retinal degeneration with a control. Analysis has been broken down by marker, mouseline, age and region of the retina recorded from</p>
Fig. 5 in A new genus and three new species of mangrove slugs from the Indo-West Pacific (Mollusca: Gastropoda: Euthyneura: Onchidiidae)
Fig. 5. Diagram that helps to visualize the data on pairwise genetic distances between COI sequences within and between mitochondrial units in Paromoionchis gen. nov. (see Table 3). Ranges of minimum to maximum distances are indicated (in percentages). For instance, within P. tumidus (Semper, 1880) unit #1, individual sequences are between 0 and 3.2% divergent; individual sequences between P. tumidus unit #1 and the other units are minimally 5% and maximally 8.4% divergent; overall, the distance gap between P. tumidus unit #1 and the eight other units is between 3.2 and 5%. The colors used for each unit are the same as those used in Figs 1–4 and 6.
Fig. 4. Maximum parsimony consensus tree within Paromoionchis gen. nov., performed with ITS2 DNA sequences from 80 in A new genus and three new species of mangrove slugs from the Indo-West Pacific (Mollusca: Gastropoda: Euthyneura: Onchidiidae)
Fig. 4. Maximum parsimony consensus tree within Paromoionchis gen. nov., performed with ITS2 DNA sequences from 80 individuals (including 7 outgroups). Numbers by the branches are the bootstrap values (only numbers> 50% are indicated). Numbers for each individual correspond to unique identifiers for DNA extraction. All sequences for specimens of Paromoionchis gen. nov. are new. Information on specimens can be found in the lists of material examined and in Table 1. The letter A corresponds to a clade referred to in the text. The color used for each (mitochondrial) unit is the same as that used in Figs 1–3 and 5–6.
Fig. 3. Maximum parsimony consensus tree within Paromoionchis gen. nov., performed with concatenated ITS2 and 28S DNA sequences from 41 in A new genus and three new species of mangrove slugs from the Indo-West Pacific (Mollusca: Gastropoda: Euthyneura: Onchidiidae)
Fig. 3. Maximum parsimony consensus tree within Paromoionchis gen. nov., performed with concatenated ITS2 and 28S DNA sequences from 41 individuals (including 7 outgroups). Numbers by the branches are the bootstrap values (only numbers> 50% are indicated). Numbers for each individual correspond to unique identifiers for DNA extraction. All sequences for specimens of Paromoionchis gen. nov. are new. Information on specimens can be found in the lists of material examined and in Table 1. Letters A and B correspond to clades referred to in the text. The color used for each (mitochondrial) unit is the same as that used in Figs 1–2 and 4–6.
Fig. 128 in The American Genera of Mydidae (Diptera), with the Description of three new Genera and two new Species
Fig. 128, Plyomydas peruviensis, gen. n., Spa n., whole insect (note: head upside down).
l in The American Genera of Mydidae (Diptera), with the Description of three new Genera and two new Species
l~ydas heros Perty, male genitalia: 99, ventral view; 100, dorsal view; 101, lateral view.
85 in The American Genera of Mydidae (Diptera), with the Description of three new Genera and two new Species
85, ventral view; 86, dorsal view; 87, lateral view.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.