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779
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ShareScore release 0.9.0
Dataset results
779 results for “CTCF”
Three-dimensional analysis of genome organization in CTCF-WT and CTCF-KO dendritic cells (ChiP-Seq II)
GEO Series GSE215042. Mus musculus. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
The BET protein BRD2 cooperates with CTCF to enforce transcriptional and architectural boundaries
GEO Series GSE95804. Mus musculus. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
Decitabine disrupts EBV genomic epiallele DNA methylation patterns around CTCF binding sites to increase chromatin accessibility and lytic transcription in gastric cancer [ChIP-seq]
GEO Series GSE234603. human gammaherpesvirus 4. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genome-wide identification of CTCF and Cohesin binding sites in neonatal mouse brain
GEO Series GSE35140. Mus musculus. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Loss of CTCF reveals basic properties of post-mitotic epigenomes and induces heart failure
GEO Series GSE96693. Mus musculus. 17 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Functional analysis of CTCF sites associated with cytokine-sensing mammary-specific enhancers in the complex casein locus [ChIP-seq]
GEO Series GSE92591. Mus musculus. 29 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
CTCF binding profiles in MEF cells
GEO Series GSE69798. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
CRISPR and biochemical screens Identify MAZ as a co-factor in CTCF-mediated insulation at Hox Clusters [ChIP-seq_set4]
GEO Series GSE190990. Mus musculus. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Promoter-proximal CTCF binding promotes distal enhancer-dependent gene activation I
GEO Series GSE146449. Mus musculus. 12 samples. Type: Other.
CTCF acetylation at lysine 20 is required for early cardiac mesoderm differentiation from embryonic stem cells
GEO Series GSE181705. Mus musculus. 30 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Cohesin-mediated chromatin remodeling controls the differentiation and function of conventional dendritic cells (RAD21 and CTCF ChIP-seq of Hoxb8-FL differentiation)
GEO Series GSE277289. Mus musculus. 9 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Absolute quantification of cohesin, CTCF and their regulators in human cells
GEO Series GSE126990. Homo sapiens. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
CTCF and transcription orchestrate chromatin structure re-configuration after mitosis
GEO Series GSE168251. Mus musculus. 44 samples. Type: Other; Genome binding/occupancy profiling by high throughput sequencing.
CTCF is dispensable for cell fate conversion but facilitates acute cellular responses [ChIP-seq]
GEO Series GSE142161. Homo sapiens. 10 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
The WNT-dependent gating of MYC requires non-canonical functions of a distal CTCF binding site (RNA-Seq II)
GEO Series GSE184103. Homo sapiens. 5 samples. Type: Expression profiling by high throughput sequencing.
Auxin-inducible degron 2 system deciphers functions of CTCF domains in transcriptional regulation [HiChIP]
GEO Series GSE201911. Homo sapiens. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
CTCF is selectively required for maintaining chromatin accessibility and gene expression in human erythropoiesis
GEO Series GSE282070. Homo sapiens. 8 samples. Type: Other.
Analysis of genome-wide binding of the insulator factors CTCF and CP190
GEO Series GSE12749. Drosophila melanogaster. 12 samples. Type: Genome binding/occupancy profiling by genome tiling array.
Chip-seq analysis of meiotic Cohesin complexes (mei-Cohesins) subunits, CTCF, and BORIS/CTCFL in Macaca fascicularis testis
GEO Series GSE118006. Macaca fascicularis. 29 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Maintenance of CTCF and transcription factor-mediated interactions from gametes to the early mouse embryo (Hi-C)
GEO Series GSE116856. Mus musculus. 2 samples. Type: Other.
ScienceDex guides
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.