Skip to main content
Powered by ShareScore

Find research datasets worth reusing

Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.

1,353

datasets available to search

ShareScore release 0.9.0

Reset

Dataset results

1,353 results for “single-cell transcriptomics”

Learn how ShareScore rates datasets ↗
geo24/100

Single-Cell Transcriptomic Atlas of Primate Ovarian Aging

GEO Series GSE130664. Macaca fascicularis; Homo sapiens. 55 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2020View details →
geo24/100

Single-cell transcriptomic analysis reveals dynamic cellular processes in corneal epithelium during wound healing in cynomolgus monkeys

GEO Series GSE276184. Macaca fascicularis. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2024View details →
geo24/100

Single-cell transcriptome dynamics in stabilized pituitary gonadotrope cells [10x]

GEO Series GSE111402. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenOct 2018View details →
geo24/100

Single-cell transcriptomics of infant and adult T cells across human tissues

GEO Series GSE195844. Homo sapiens. 160 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2025View details →
geo24/100

Transcriptomes of major renal collecting duct cell types in mouse identified by single-cell RNA-Seq

GEO Series GSE99701. Mus musculus. 262 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenOct 2017View details →
geo24/100

Single-cell transcriptomic profiles of metastatic lesion biopsies and PBMCs from M1-stage prostate cancer patients

GEO Series GSE297652. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenNov 2025View details →
geo24/100

Single-cell transcriptomics of peripheral blood reveals a novel B-cell subset in renal allograft recipients with accommodation

GEO Series GSE175429. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2021View details →
geo24/100

Single-cell transcriptome Atlas reveals protective characteristics of COVID-19 mRNA vaccine [bulk RNA-seq]

GEO Series GSE209615. Macaca mulatta. 7 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenOct 2022View details →
geo24/100

RNA-seq of Single-Cell Genotyping of Transcriptomes

GEO Series GSE117824. Homo sapiens; Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJun 2019View details →
geo24/100

Standard and targeted single-cell transcriptomics of CD8+ T cell samples and targeted single-cell transcriptomics of B cell samples for systematic analysis

GEO Series GSE223704. Homo sapiens. 24 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2023View details →
geo24/100

Single-cell transcriptomics of Osr1 positive cells from mouse second heart field

GEO Series GSE309215. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenOct 2025View details →
geo24/100

Single-cell transcriptome profiling of mouse bone marrow-derived immune cells in response to trypanosome infection

GEO Series GSE234000. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2023View details →
geo24/100

Defining the Regulatory Logic of Breast Cancer Using Single-Cell Epigenetic and Transcriptome Profiling

GEO Series GSE243526. Homo sapiens. 40 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenDec 2024View details →
geo24/100

Single-cell joint analysis of DNA oxidative damage and transcriptome [Hela paired damage]

GEO Series GSE268554. Homo sapiens. 4 samples. Type: Other; Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenJan 2025View details →
geo24/100

Precursors of human CD4+ cytotoxic T lymphocytes identified by single-cell transcriptome analysis [scRNA-seq]

GEO Series GSE106540. Homo sapiens. 2244 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2018View details →
geo24/100

Single-Cell Transcriptomics Links Loss of Human Pancreatic β-Cell Identity to ER Stress

GEO Series GSE263565. Homo sapiens. 30 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenApr 2024View details →
geo24/100

Single-cell transcriptomic landscapes of the otic neuronal lineage at multiple early embryonic ages

GEO Series GSE178931. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2022View details →
geo24/100

Spatially resolved single-cell analysis uncovers protein kinase Cδ-expressing microglia with anti-tumor activity in glioblastoma [Spatial Transcriptomics]

GEO Series GSE298689. Mus musculus. 1 samples. Type: Other.

openGEO-OpenNov 2025View details →
geo24/100

devCellPy: A machine learning-enabled pipeline for automated annotation of complex multilayered single-cell transcriptomic data

GEO Series GSE184943. Homo sapiens; Mus musculus. 1186 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2022View details →
geo24/100

A single-cell transcriptomic analysis reveals precise pathways and regulatory mechanisms underlying hepatoblast differentiation

GEO Series GSE90047. Mus musculus. 547 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJul 2017View details →

ScienceDex guides

Understand access before you commit

These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

Compare curated datasets

Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record

ScienceDex for faculty

Your academic CV and NIH biosketch

Make your CV in your school's format and your NIH biosketch from it, then download both as Word files.