Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
67
datasets available to search
ShareScore release 0.9.0
Dataset results
67 results for “ASV”
ASV Table 1
<p>Unrarefied ASV table including all samples and controls.</p>
Adherence to ASV Therapy in Heart Failure With Preserved Ejection Fraction Feasibility Study
ClinicalTrials.gov study NCT03195660. IPD Sharing: NO. Countries: 2. Publications: 0.
EASiVENT Study Comparing INTELLiVENT-ASV vs Non Automated Ventilation in Adult ICU Patients
ClinicalTrials.gov study NCT04400643. IPD Sharing: NO. Countries: 1. Publications: 0.
Effectiveness of Adaptive Servoventilation (ASV) in Patients With Central Sleep Apnea Due to Chronic Opioid Use
ClinicalTrials.gov study NCT01462084. IPD Sharing: NO. Countries: 1. Publications: 0.
Mapfile and ASV table of whole-body and shell-surface samples from geminate species of gastropods separated by the Isthmus of Panama
Open the record for dataset details and reuse information.
18S Amplicon sequence variants (ASVs) data of NEREA Augmented Observatory
<p>Illumina paired-end V9-18S raw reads (FASTQ format, 2 X 150 PE) were pre-processed with cutadapt and vsearch to remove primer sequences, trim low quality bases and unify mixed orientation reads produced in the ligation-based library preparation; the procedure was implemented in a custom bash script. Processed reads were then used to generate amplicon sequence variants (ASVs) using the DADA2 R library; the pipeline was adapted from the one described on the program website (<span><span><a href="https://benjjneb.github.io/dada2/tutorial.html" target="_blank" rel="noopener">https://benjjneb.github.io/dada2/tutorial.html</a></span></span>); no further quality filtering was implemented at this stage, except for discarding all reads with ambiguities (parameter maxN = 0 of function filterAndTrim). Filtered forward (F) and reverse (R) reads were used to train the error model and then denoised by applying the trained error model to generate ASVs. Finally, F and R reads were merged and checked for chimeras; allowing no mismatches in read merging (default parameter maxMismatch = 0 of function mergePairs). ASVs were then classified with BLAST against the PR2 v5.01 reference database, integrated with 1,293 sequences from GoN protist strains and fungi environmental sequences. Highest bit score matching with the best taxonomic resolution were then selected among the returned results.</p>
rDNA 18S V9 ASVs (DADA2) from the Tara Pacific Expedition
<p>This repository contains datasets describing the DADA2 ASVs generated from the <em>Tara</em> Pacific expedition V9 18S rDNA metabarcoding sequencing data. The ASVs were generated were generated using the nf-core workflow ampliseq. Please refer to the readme file for more details.</p>
(S5-SAMU) Randomized Study Comparing the ASV (Adaptative Support Ventilation) to Conventional Ventilation
ClinicalTrials.gov study NCT02348047. IPD Sharing: Not stated. Countries: 1. Publications: 0.
A Comparison of Intellivent-ASV Mode With Conventional Modes in Patients With BMI >35
ClinicalTrials.gov study NCT04973917. IPD Sharing: NO. Countries: 1. Publications: 0.
ASV Therapy for Insomnia
ClinicalTrials.gov study NCT07011966. IPD Sharing: UNDECIDED. Countries: 1. Publications: 0.
Adaptive Servo Ventilation (ASV) in Heart Failure
ClinicalTrials.gov study NCT02440971. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Ventilation With ASV Mode in Children
ClinicalTrials.gov study NCT03930147. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Phase 1a Study to Evaluate Immunogenicity of ASV®
ClinicalTrials.gov study NCT03673020. IPD Sharing: NO. Countries: 1. Publications: 0.
To Assess the Effect of Renal Impairment on the Blood Levels of Daclatasvir (DCV), Asunaprevir (ASV) and BMS-791325 After Multiple Doses of a Fixed Dose Combination Tablet
ClinicalTrials.gov study NCT02108639. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Patients With Heart Failure With Preserved Ejection Fraction Adherence to ASV Therapy (PEP ASV)
ClinicalTrials.gov study NCT04133350. IPD Sharing: UNDECIDED. Countries: 2. Publications: 0.
Intellivent ASV in Chronic Obstructive Pulmonary Disease Patients in the ICU
ClinicalTrials.gov study NCT02651935. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Genome-wide maps of AR recruitment in primary human ovarian granulosa cells (GCs) transduced with androgen receptor (AR) alternative splice variant (ASV)
GEO Series GSE58628. Homo sapiens. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Drug Interaction Study of an OCP (Norethindrone (ND) Acetate and Ethinyl Estradiol (EE))With a Combination of Daclatasvir (DCV) Asunaprevir (ASV) and BMS-791325
ClinicalTrials.gov study NCT02103569. IPD Sharing: Not stated. Countries: 0. Publications: 0.
Measuring the mutation rate of the developed trVLP-ASV system
GEO Series GSE302091. Mesocricetus auratus. 21 samples. Type: Expression profiling by high throughput sequencing.
16S Amplicon sequence variants (ASVs) data of NEREA Augmented Observatory
<p>Cleaned raw 16S paired-end sequences were imported into the QIIME2 pipeline v. 2022.2.0. Leftover primers and adapters’ sequences were removed through cutadapt. The amplicon sequence variants (ASV) table, which represent true biological sequences within each sample, was generated using the denoised-paired method including truncation, denoising, dereplication, and chimera filtering of the DADA2 (Divisive Amplicon Denoising Algorithm 2) plugin inside QIIME2. Default parameters were used with the exception of the forward and reverse sequence length (--p-trunc-len-f and --p-trunc-len-r), that were set to 220 and 180, respectively. For taxonomy classification, the V4-V5 region were extracted from the pre-formatted reference sequences and taxonomy file build on the SILVA 138 99% OTUS database and the vsearch v. 2.6.2 global alignment implemented in QIIME2 was used.</p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.