Find research datasets worth reusing
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139
datasets available to search
ShareScore release 0.9.0
Dataset results
139 results for “CLIP-seq”
Functional Antagonism Between CELF and Mbnl Proteins in Cytoplasm and Nucleus [CLIP-seq]
GEO Series GSE61892. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Regulation of mRNA translation and subcellular location controls protein synthesis of key modulators of the DNA damage response during B cell activation [CLIP-seq]
GEO Series GSE93575. Mus musculus. 2 samples. Type: Other.
A dual role of human tRNA methyltransferase hTrmt13 in regulating translation and transcription [CLIP-seq]
GEO Series GSE166274. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
M6A reduction relieves FUS-associated ALS granules [CLIP-seq]
GEO Series GSE256070. Homo sapiens. 4 samples. Type: Other.
Integrative RNA-seq and CLIP-seq analysis reveals hnRNP-F regulation of the TNFα/NFκB signaling in high glucose conditions
GEO Series GSE273001. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
CRISPR-TRAPSeq identifies the QKI RNA binding protein as important for astrocytic maturation and control of thalamocortical synapses (CLIP-Seq dataset)
GEO Series GSE147119. Mus musculus. 11 samples. Type: Other.
Improved RNA stability estimation through Bayesian modeling reveals most bacterial transcripts have sub-minute half-lives [CLIP-seq]
GEO Series GSE234007. Salmonella enterica subsp. enterica serovar Typhimurium. 12 samples. Type: Other.
RNA-seq analysis of wild-type and csrp1KO mESCs and embryoid bodies of day 9, and CLIP-seq of Csrp1 in mouse embryoid bodies of day 9
GEO Series GSE226214. Mus musculus. 16 samples. Type: Expression profiling by high throughput sequencing; Other.
CLIP-seq of MSTR-1::FLAG and N2
GEO Series GSE185302. Caenorhabditis elegans. 4 samples. Type: Other.
CLIP-seq analysis of cytoplasmic poly(A) binding protein-1 reveals binding to genomically encoded sequences within mammalian mRNAs
GEO Series GSE69755. Mus musculus. 5 samples. Type: Expression profiling by high throughput sequencing.
Enhanced CLIP-Seq (eCLIP-Seq) of PXR in different cell types
GEO Series GSE253844. Homo sapiens; Mus musculus. 9 samples. Type: Other.
PTB CLIP-seq
GEO Series GSE19323. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
CLIP-seq analysis of integrase-RNA interactions
GEO Series GSE83588. Human immunodeficiency virus 1. 5 samples. Type: Expression profiling by high throughput sequencing.
DHX9 suppresses spurious RNA processing defects originating from the Alu invasion of the human genome [XL9 DHX9 FLASH CLIP-seq]
GEO Series GSE89598. Mus musculus. 4 samples. Type: Other.
Distinct and shared molecular targets and functions of ALS-associated TDP-43, FUS, and TAF15 revealed by comprehensive multi-system integrative analyses [CLIP-Seq]
GEO Series GSE77700. Mus musculus. 1 samples. Type: Other.
RNA-dependent chromatin targeting of TET2 for endogenous retrovirus control in pluripotent stem cells [CLIP-Seq]
GEO Series GSE103268. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.
Uridylation-mediated RNA quality control pathway in mammalian cytoplasm [CLIP-Seq]
GEO Series GSE81536. Homo sapiens. 3 samples. Type: Other.
RNA-seq of KD, rescues of NMD factors, and UPF1-flag CLIP-seq in HeLa cells.
GEO Series GSE86148. Homo sapiens. 35 samples. Type: Expression profiling by high throughput sequencing.
Xist recruits the X chromosome to the nuclear lamina to enable chromosome-wide silencing [CLIP-seq]
GEO Series GSE86250. Mus musculus. 7 samples. Type: Other.
DDX50 cooperates with STAU1 to effect stabilization of pro-differentiation RNAs [ClIP-Seq ddx50]
GEO Series GSE252324. Homo sapiens. 18 samples. Type: Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.