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779
datasets available to search
ShareScore release 0.9.0
Dataset results
779 results for “CTCF”
CTCF chromatin residence time controls 3D genome organization, gene expression and DNA methylation in pluripotent cells
GEO Series GSE154009. Mus musculus. 38 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
CRISPR and biochemical screens Identify MAZ as a co-factor in CTCF-mediated insulation at Hox Clusters [CRISPR_set9]
GEO Series GSE192437. Mus musculus. 6 samples. Type: Other.
Comparative Hi-C reveals that CTCF underlies evolution of chromosomal domain architecture.
GEO Series GSE65126. Macaca mulatta; Canis lupus familiaris; Oryctolagus cuniculus; Mus musculus. 8 samples. Type: Other.
Glucocorticoid receptor regulates the ANGPTL4 gene in a CTCF-mediated chromatin context in human hepatic cells
GEO Series GSE85343. Homo sapiens. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
CTCF-Mediated Human 3D Genome Architecture Reveals Chromatin Topology for Transcription
GEO Series GSE72816. Homo sapiens. 6 samples. Type: Other.
Defining the relative and combined contribution of CTCF and CTCFL to genomic regulation
GEO Series GSE140363. Mus musculus. 122 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Single-cell Multiomics Analysis Reveals CTCF as a Key Regulator of Lung Morphogenesis and Progenitor Maintenance
GEO Series GSE286983. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Histone variant H2A.Z regulates nucleosome unwrapping and CTCF binding in mouse ES cells
GEO Series GSE146082. Mus musculus. 35 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Establishment of 3D chromatin structure after fertilization and the metabolic switch at the morula-to-blastocyst transition require CTCF [RNA-seq]
GEO Series GSE180306. Mus musculus. 28 samples. Type: Expression profiling by high throughput sequencing.
SATB1 Regulates 3D Genome Architecture in T cells by Constraining Chromatin Interactions surrounding CTCF-binding sites [CUT&Tag]
GEO Series GSE198267. Homo sapiens. 14 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
CGGBP1 regulates chromatin barrier activity and CTCF occupancy at repeats
GEO Series GSE129548. Homo sapiens. 10 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genomic Retargeting of Tumor Suppressors p53 and CTCF Promotes Oncogenesis
GEO Series GSE140254. Homo sapiens. 30 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
The essential role of CTCF binding site at TAD boundaries in modulating Ifng locus chromatin interactions and transcriptional regulation [RNA-seq]
GEO Series GSE300740. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.
Mitotic bookmarking by CTCF and fast post-mitotic gene reactivation in ES cells
GEO Series GSE196889. Mus musculus. 55 samples. Type: Expression profiling by high throughput sequencing.
CTCF is required to form regulatory and physical boundaries at limited sites in the Drosophila nervous system [Hi-C]
GEO Series GSE146750. Drosophila melanogaster. 8 samples. Type: Other.
SATB1 Regulates 3D Genome Architecture in T cells by Constraining Chromatin Interactions surrounding CTCF-binding sites
GEO Series GSE199007. Homo sapiens; Mus musculus. 36 samples. Type: Other; Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Genome-wide mapping of OCT4, NANOG and CTCF in human embryonic stem cells
GEO Series GSE20650. Homo sapiens. 5 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Targeted degradation of CTCF decouples local insulation of chromosome domains from genomic compartmentalization
GEO Series GSE98671. Mus musculus. 102 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Genome-wide analysis of POLR2, CTCF, RAD21, and H3K9ac binding in N1E115 cells
GEO Series GSE139481. Mus musculus. 30 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Nucleosome dynamics specifies genome-wide binding of the male germ cell gene regulator CTCFL and of CTCF [Mouse430_2 Expression]
GEO Series GSE34091. Mus musculus. 8 samples. Type: Expression profiling by array.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.