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773
datasets available to search
ShareScore release 0.9.0
Dataset results
773 results for “CUT&TAG”
Multimodal chromatin profiling using nanobody-based single-cell CUT&Tag
GEO Series GSE198467. Mus musculus. 5 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
EZH2 inhibition remodels the inflammatory senescence-associated secretory phenotype to potentiate pancreatic cancer immune surveillance [CUT&Tag sequencing for H3K27me3]
GEO Series GSE221417. Mus musculus. 13 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
KDM5 demethylases suppress R-loop-mediated “viral mimicry” and DNA damage in breast cancer cells [CUT&Tag_H3K4me3]
GEO Series GSE296387. Homo sapiens. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Ehd3 plays an essential role in recruiting SDG724 to H3K4me1-enriched chromatin regions (CUT&Tag).
GEO Series GSE311865. Oryza sativa. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Rapid redistribution and extensive co-binding of NANOG and GATA6 at shared regulatory elements underlie specification of divergent cell fates [CUT&TAG, CUT&RUN]
GEO Series GSE181100. Mus musculus. 57 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
The transcriptional regulator Prdm1 is a master gene for the early development of the sensory whisker follicle and is wired to the Lef1 circuitry [CUT&TAG]
GEO Series GSE192851. Mus musculus. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Age-associated G-quadruplex accumulation and DDX5 loss shape chromatin landscapes in human astrocytes [CUT&Tag]
GEO Series GSE307274. Homo sapiens. 16 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
S-adenosylmethionine synthases specify distinct H3K3me3 populations and gene expression patterns during heat stress [CUT&Tag]
GEO Series GSE223594. Caenorhabditis elegans. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
G-quadruplex stabilizer CX-5461 effectively combines with ionizing radiation to selectively target ATRX-deficient malignant glioma [CUT&Tag]
GEO Series GSE261562. Homo sapiens. 12 samples. Type: Other.
scNanoSeq-CUT&Tag: a long-read single-cell CUT&Tag sequencing method for efficient chromatin modification profiling within individual cells
GEO Series GSE249799. Mus musculus; Homo sapiens. 46 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
CUT&Tag (H3K4me3) in MGE, CGE, LGE and cortical regions from mouse (C57BL/6J) embryonic forebrain
GEO Series GSE201487. Mus musculus. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Spatial epigenome-transcriptome co-profiling of mammalian tissues [spatial CUT&Tag]
GEO Series GSE217091. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
CUT&Tag for efficient epigenomic profiling of small samples and single cells (965 single cells)
GEO Series GSE129119. Homo sapiens. 965 samples. Type: Other; Genome binding/occupancy profiling by high throughput sequencing.
Relaxed 3D genome conformation facilitates the pluripotent to totipotent-like state transition in embryonic stem cells [ATAC-seq, ChIP-seq, RNA-seq, CUT&Tag]
GEO Series GSE159621. Mus musculus. 38 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
CUT&Tag for efficient epigenomic profiling of small samples and single cells (807 single cells)
GEO Series GSE124683. Homo sapiens. 807 samples. Type: Other; Genome binding/occupancy profiling by high throughput sequencing.
Lipid metabolism reprograming by SREBP1-PCSK9 targeting sensitizes pancreatic cancer to immunochemotherapy [CUT&Tag]
GEO Series GSE292417. Homo sapiens. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Phf23 regulates embryonic neurogenesis by increasing the level of H3K27ac of Tcf4 [CUT&Tag]
GEO Series GSE277736. Mus musculus. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Spatial epigenome-transcriptome co-profiling of mammalian tissues [CUT&TAG]
GEO Series GSE205051. Mus musculus. 1 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
A metabolic associated fatty liver disease risk variant in MBOAT7 regulates toll like receptor induced outcomes [Cut&Tag]
GEO Series GSE204964. Homo sapiens. 4 samples. Type: Other.
CUT&Tag analysis of HDAC1 binding profile with or without PKA inhibitor H89 treatment
GEO Series GSE285017. Homo sapiens. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.