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ShareScore release 0.9.0
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569 results for “DNA replication”
Supplementary material 5 from: Weigand AM, Macher J-N (2018) A DNA metabarcoding protocol for hyporheic freshwater meiofauna: Evaluating highly degenerate COI primers and replication strategy. Metabarcoding and Metagenomics 2: e26869. https://doi.org/10.3897/mbmg.2.26869
Table S2: Primer combinations :
Supplementary material 2 from: Weigand AM, Macher J-N (2018) A DNA metabarcoding protocol for hyporheic freshwater meiofauna: Evaluating highly degenerate COI primers and replication strategy. Metabarcoding and Metagenomics 2: e26869. https://doi.org/10.3897/mbmg.2.26869
Figure S1: Overview of sediment characteristics :
Supplementary material 4 from: Weigand AM, Macher J-N (2018) A DNA metabarcoding protocol for hyporheic freshwater meiofauna: Evaluating highly degenerate COI primers and replication strategy. Metabarcoding and Metagenomics 2: e26869. https://doi.org/10.3897/mbmg.2.26869
Table S1: Sampling site coordinates :
Supplementary material 1 from: Weigand AM, Macher J-N (2018) A DNA metabarcoding protocol for hyporheic freshwater meiofauna: Evaluating highly degenerate COI primers and replication strategy. Metabarcoding and Metagenomics 2: e26869. https://doi.org/10.3897/mbmg.2.26869
DNA extraction protocol :
Genome-wide analysis reveals extensive functional interaction between DNA replication initiation and transcription in the genome of Trypanosoma brucei
<p>Raw ChIP-chip and MFA-seq data from the paper listed above.</p>
Effect of Adenovirus E1A Oncogene on DNA Replication Dynamics
ClinicalTrials.gov study NCT03325517. IPD Sharing: UNDECIDED. Countries: 0. Publications: 28.
Molecular determinants of phase separation for Drosophila DNA replication licensing factors
Open the record for dataset details and reuse information.
Data from: Two subunits of human ORC are dispensable for DNA replication and proliferation
Open the record for dataset details and reuse information.
RAD51 Interconnects Between DNA Replication DNA Repair and Immunity
RAD51 a multifunctional protein plays a central role in DNA replication and homologous recombination repair and is known to be involved in cancer development. We identified a novel role for RAD51 in innate immune response signaling. Defects in RAD51 lead to the accumulation of self-DNA in the cytoplasm triggering a STING-mediated innate immune response after replication stress and DNA damage. Our data suggest that in addition to playing roles in homologous recombination-mediated DNA double-strand break repair and replication fork processing RAD51 is also implicated in the suppression of innate immunity. Thus our study reveals a previously uncharacterized role of RAD51 in initiating immune signaling placing it at the hub of new interconnections between DNA replication DNA repair and immunity. Overall design Gene expression analysis of WT and sh RAD51 HT1080 cells was carried out before and after 1 Gy of high LET Fe particle radiation.
Multigenerational cell tracking of DNA replication and heritable DNA damage (bulk)
GEO Series GSE288485. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Asymmetric down-regulation of tolerance to DNA damage at replication forks
GEO Series GSE90157. Saccharomyces cerevisiae. 14 samples. Type: Genome binding/occupancy profiling by genome tiling array.
P-bodies regulate transcriptional rewiring to promote DNA replication stress resistance
GEO Series GSE83515. Saccharomyces cerevisiae. 28 samples. Type: Expression profiling by high throughput sequencing.
Determination of human DNA replication origin position and efficiency reveals principles of initiation zone organisation
GEO Series GSE186675. Homo sapiens. 5 samples. Type: Other.
Multiplexed TrAEL-seq captures DNA replication dynamics in mammalian cells
GEO Series GSE314764. Homo sapiens. 17 samples. Type: Other.
Mutations in EGFR compromise hypoxia associated radiation resistance through impaired repair of replication fork associated DNA double-strand breaks
GEO Series GSE95564. Homo sapiens. 12 samples. Type: Expression profiling by array.
Conserved forkhead dimerization motif controls DNA replication timing and spatial organization of chromosomes in S. cerevisiae
GEO Series GSE94796. Saccharomyces cerevisiae. 28 samples. Type: Genome binding/occupancy profiling by genome tiling array; Other.
Cell type- and chromosome-specific chromatin landscapes and DNA replication programs of Drosophila testis stem cells [Repli-seq]
GEO Series GSE291715. Drosophila melanogaster. 14 samples. Type: Other.
Transcriptionally Driven DNA Replication Programme of the Human Parasite Leishmania major
GEO Series GSE81991. Leishmania major strain Friedlin. 5 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
Identification of cis elements for temporal and spatial control of DNA replication [Repli-Seq YY1]
GEO Series GSE124695. Mus musculus. 8 samples. Type: Other.
Replication Fork-Associated RNA-DNA Hybrids Safeguard Genomic Stability in Transcriptionally Active Regions [REFORC]
GEO Series GSE254306. Homo sapiens. 20 samples. Type: Other.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.