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zenodo40/100

Born Digital, Born Slippery - Data Modelling for Born Digital/Hybrid objects (March 2022)

<p>The report Preserving and sharing born-digital and hybrid objects from and across the National Collection discusses the challenges for cultural heritage institutions in cataloguing, preserving, and providing access to four born digital and hybrid objects/projects. This response looks at the issues brought up by those discussions, in particular for the purpose of cataloguing, and the extent, within existing cataloguing standards, they can be supported. Where there does not appear to be support within current standards, model development activity is proposed to allow the expansion of the current `born physical` focused cataloguing standards to also handle born digital and hybrid object cataloguing.</p>

opencc-by-4.0Mar 2022View details →
zenodo40/100

Text-fig. 10. Langtonia bisulcata REID et CHANDLER. a, b, e–g: Holotype, V. 22984, from micro-CT data. a: Dorsiventral view surface rendering. b: Dorsiventral view translucent volume rendering showing outline of locule cast. c: Equatorial transverse fracture showing paired dorsal infolds and locules with shape of a ε in cross section, reflected light, V. 22993. d: Digital transverse section from micro-CT data, of fruit with two well developed ε-shaped locules, V. 22985. e–g: Successive digital transverse sections with one well developed ε-shaped locule and infolds of the abortive locule visible in (g) (arrows). h–j: Physical transverse thin sections of specimen from middle Eocene Clarno Formation, Oregon, USA with well-preserved mesocarp including longitudinal canals in (j) (arrows), USNM 424875; Scale bars 0.5 cm in (a, b), 2.5 mm in (c–g), 5 mm in (h), 2 mm in (i), 1 mm in (j); (a, b) share same scale bar; (c, d) share same scale bar; (e, f, g) share same scale bar. in Mastixioid Fruits (Cornales) From The Early Eocene London Clay Flora: Morphology, Anatomy And Nomenclatural Revision

Text-fig. 10. Langtonia bisulcata REID et CHANDLER. a, b, e–g: Holotype, V. 22984, from micro-CT data. a: Dorsiventral view surface rendering. b: Dorsiventral view translucent volume rendering showing outline of locule cast. c: Equatorial transverse fracture showing paired dorsal infolds and locules with shape of a ε in cross section, reflected light, V. 22993. d: Digital transverse section from micro-CT data, of fruit with two well developed ε-shaped locules, V. 22985. e–g: Successive digital transverse sections with one well developed ε-shaped locule and infolds of the abortive locule visible in (g) (arrows). h–j: Physical transverse thin sections of specimen from middle Eocene Clarno Formation, Oregon, USA with well-preserved mesocarp including longitudinal canals in (j) (arrows), USNM 424875; Scale bars 0.5 cm in (a, b), 2.5 mm in (c–g), 5 mm in (h), 2 mm in (i), 1 mm in (j); (a, b) share same scale bar; (c, d) share same scale bar; (e, f, g) share same scale bar.

opencc-by-4.0Aug 2022View details →
zenodo40/100

Text-fig. 9. Portnallia. a–j: P. bognorensis M.CHANDLER. a–g: Holotype, V. 30421. a: Oblique lateral view with dorsal surface of locule cast facing towards right side. b: Basal view (original illustration from pl. 28, fig. 40 of Chandler 1961). c–g: Micro CT data. c–f: Surface renderings. c: Lateral view with interlocular septum facing forward. d: lateral view with dorsal surface of locule facing forward. e: Basal view. f: Apical view. g: Digital transverse section near equatorial position showing (c) to u-shaped locules. h: Apical view of tetralocular fruit, V. 30423 (original illustration from pl. 28, fig. 42 of Chandler 1961). i: Transverse section of specimen in (h), reflected light. j–o: P. sheppeyensis M.CHANDLER, Holotype V. 30428, here synomomized with P. bognorensis, from micro-CT data. j–m: Surface renderings. j: Lateral view with interlocular septum facing forward. k: Lateral view with dorsal surface of locule facing forward. l: Basal view. m: Apical view. n: Digital equatorial transverse section showing the three preserved locules and extensive cracking due to pyrite decomposition. o: Translucent volume rendering, apical view showing (c) to u-shaped locules. Scale bars 2 mm, bar in (a) applies also to (b), bar in (e) applies to also to (c, d), bar in (g) applies also to (f), bar in (j) applies to applies also to (k–m). in Mastixioid Fruits (Cornales) From The Early Eocene London Clay Flora: Morphology, Anatomy And Nomenclatural Revision

Text-fig. 9. Portnallia. a–j: P. bognorensis M.CHANDLER. a–g: Holotype, V. 30421. a: Oblique lateral view with dorsal surface of locule cast facing towards right side. b: Basal view (original illustration from pl. 28, fig. 40 of Chandler 1961). c–g: Micro CT data. c–f: Surface renderings. c: Lateral view with interlocular septum facing forward. d: lateral view with dorsal surface of locule facing forward. e: Basal view. f: Apical view. g: Digital transverse section near equatorial position showing (c) to u-shaped locules. h: Apical view of tetralocular fruit, V. 30423 (original illustration from pl. 28, fig. 42 of Chandler 1961). i: Transverse section of specimen in (h), reflected light. j–o: P. sheppeyensis M.CHANDLER, Holotype V. 30428, here synomomized with P. bognorensis, from micro-CT data. j–m: Surface renderings. j: Lateral view with interlocular septum facing forward. k: Lateral view with dorsal surface of locule facing forward. l: Basal view. m: Apical view. n: Digital equatorial transverse section showing the three preserved locules and extensive cracking due to pyrite decomposition. o: Translucent volume rendering, apical view showing (c) to u-shaped locules. Scale bars 2 mm, bar in (a) applies also to (b), bar in (e) applies to also to (c, d), bar in (g) applies also to (f), bar in (j) applies to applies also to (k–m).

opencc-by-4.0Aug 2022View details →
zenodo40/100

Text-fig. 8. Lanfrancia subglobosa E.REID et M.CHANDLER. a–c, e–g: Holotype V. 23014. a: reflected light. b, c: Surface renderings from micro-CT data. a, b: Lateral views with dorsal surface of locule facing forward and locule casts protruding in upper part. c: Apical view. d: Fruit showing two locule casts the dorsal surfaces of which face to the left and the right, V. 30417(1). e–g: Successive digital transverse sections showing four u to v to c-shaped locules from micro-CT data. h: Physical transverse section of specimen in (d). i–k: Physical transverse section, V. 30419 from Herne Bay, blue lines in K indicating limits of fibre layer lining the locule. l: Detail from (h), showing sclerenchyma composing the septa and central axis. m: Transverse section, enlargement from (i), showing anatomy of tissues adjacent to the dorsal infold. Blue lines indicate limits of the fibre layer lining the locule. n: Part of (m) recut, tangential section transecting the dorsal infold (central), both limbs of the locule cast, and peripheral parts of the pericarp on either side. o: Detail from (n), showing anatomy of the infold. Scale bars 5 mm in (a–h) (a–g share the same bar), 3 mm in (i), 1 mm in (j–m), 0.5 mm in (n), 0.2 mm in (o). in Mastixioid Fruits (Cornales) From The Early Eocene London Clay Flora: Morphology, Anatomy And Nomenclatural Revision

Text-fig. 8. Lanfrancia subglobosa E.REID et M.CHANDLER. a–c, e–g: Holotype V. 23014. a: reflected light. b, c: Surface renderings from micro-CT data. a, b: Lateral views with dorsal surface of locule facing forward and locule casts protruding in upper part. c: Apical view. d: Fruit showing two locule casts the dorsal surfaces of which face to the left and the right, V. 30417(1). e–g: Successive digital transverse sections showing four u to v to c-shaped locules from micro-CT data. h: Physical transverse section of specimen in (d). i–k: Physical transverse section, V. 30419 from Herne Bay, blue lines in K indicating limits of fibre layer lining the locule. l: Detail from (h), showing sclerenchyma composing the septa and central axis. m: Transverse section, enlargement from (i), showing anatomy of tissues adjacent to the dorsal infold. Blue lines indicate limits of the fibre layer lining the locule. n: Part of (m) recut, tangential section transecting the dorsal infold (central), both limbs of the locule cast, and peripheral parts of the pericarp on either side. o: Detail from (n), showing anatomy of the infold. Scale bars 5 mm in (a–h) (a–g share the same bar), 3 mm in (i), 1 mm in (j–m), 0.5 mm in (n), 0.2 mm in (o).

opencc-by-4.0Aug 2022View details →
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Text-fig. 6. Exbeckettia mastixioides (E.REID et M.CHANDLER) comb. nov. from the London Clay. a–f: Holotype, V. 23002, bilocular fruit. a–d: Surface renderings from micro-CT data. a: Apical view. b: Basal view. c: Lateral view with dorsal surface of locule facing forward. d: lateral view with interlocular septum facing forward. e, f: Digital sections from micro-CT data. e: transverse equatorial showing U-shaped locules and distinct dark endocarp (arrows). f: Median longitudinal intercepting both locules. g: lateral view of bilocular fruit with interlocular septum facing forward. V. 23013(3). h: Apical view of bilocular fruit with two exposed locule casts, V. 23013(1). i–l: Fruits in physical transverse section showing U-shaped locules and distinct locule lining. i: Bilocular fruit shown in (g). j: Bilocular fruit, V. 23007. k: Fruit with one locule larger than the other, V. 23006. l: Tetralocular fruit, V. 22993. Scale bar 5 mm in (a–l), bar in (a) applies also to (b–d), bar in (e) applies also to (f), bar in (j) applies to (i–l). in Mastixioid Fruits (Cornales) From The Early Eocene London Clay Flora: Morphology, Anatomy And Nomenclatural Revision

Text-fig. 6. Exbeckettia mastixioides (E.REID et M.CHANDLER) comb. nov. from the London Clay. a–f: Holotype, V. 23002, bilocular fruit. a–d: Surface renderings from micro-CT data. a: Apical view. b: Basal view. c: Lateral view with dorsal surface of locule facing forward. d: lateral view with interlocular septum facing forward. e, f: Digital sections from micro-CT data. e: transverse equatorial showing U-shaped locules and distinct dark endocarp (arrows). f: Median longitudinal intercepting both locules. g: lateral view of bilocular fruit with interlocular septum facing forward. V. 23013(3). h: Apical view of bilocular fruit with two exposed locule casts, V. 23013(1). i–l: Fruits in physical transverse section showing U-shaped locules and distinct locule lining. i: Bilocular fruit shown in (g). j: Bilocular fruit, V. 23007. k: Fruit with one locule larger than the other, V. 23006. l: Tetralocular fruit, V. 22993. Scale bar 5 mm in (a–l), bar in (a) applies also to (b–d), bar in (e) applies also to (f), bar in (j) applies to (i–l).

opencc-by-4.0Aug 2022View details →
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Text-fig. 1. Diplopanax cacaoides (ZENKER) comb. nov. a–d: [Holotype of Mastixia cantia E.REID et M.CHANDLER, V.22953]. a: Lateral view of longitudinally broken specimen, reflected light. b–d: Surface renderings from micro-CT data. b: Lateral view of longitudinal fracture surface. c: Same specimen rotated to show external surface. d: Enlargement of lower half from (a, b), reflected light. e, f: Specimen figured originally as a paratype of M. cantia, V.22954 (Reid and Chandler 1933: pl. 25, fig. 3), reflected light. e: Ventral view with much of the endocarp wall fallen away exposing smooth convex ventral surface of locule cast. f: Transversely fractured surface, showing thick wall of the endocarp, and dehiscence plane leading to the left limb of the locule. g: Transversely sectioned, laterally compressed specimen from Miocene of Wiesa, Germany for comparison, Senckenberg Museum, SM.B. 21034/I. h–j: Digital transverse sections from micro-CT data of the Holotype V.22953. h: Transverse fracture surface from (b), showing curved locule and zone of weakness defining the germination valve (arrow), reflected light. i: Same orientation with clear demarcation of the separation plane of the germination valve (arrow), digital section from micro-CT scan. j: Enlargement from (h). Scale bars 5 mm. in Mastixioid Fruits (Cornales) From The Early Eocene London Clay Flora: Morphology, Anatomy And Nomenclatural Revision

Text-fig. 1. Diplopanax cacaoides (ZENKER) comb. nov. a–d: [Holotype of Mastixia cantia E.REID et M.CHANDLER, V.22953]. a: Lateral view of longitudinally broken specimen, reflected light. b–d: Surface renderings from micro-CT data. b: Lateral view of longitudinal fracture surface. c: Same specimen rotated to show external surface. d: Enlargement of lower half from (a, b), reflected light. e, f: Specimen figured originally as a paratype of M. cantia, V.22954 (Reid and Chandler 1933: pl. 25, fig. 3), reflected light. e: Ventral view with much of the endocarp wall fallen away exposing smooth convex ventral surface of locule cast. f: Transversely fractured surface, showing thick wall of the endocarp, and dehiscence plane leading to the left limb of the locule. g: Transversely sectioned, laterally compressed specimen from Miocene of Wiesa, Germany for comparison, Senckenberg Museum, SM.B. 21034/I. h–j: Digital transverse sections from micro-CT data of the Holotype V.22953. h: Transverse fracture surface from (b), showing curved locule and zone of weakness defining the germination valve (arrow), reflected light. i: Same orientation with clear demarcation of the separation plane of the germination valve (arrow), digital section from micro-CT scan. j: Enlargement from (h). Scale bars 5 mm.

opencc-by-4.0Aug 2022View details →
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Text-fig. 4. Mastixia cf. oregonensis (R.A.SCOTT) TIFFNEY et HAGGARD from the London Clay, originally included within the concept of M. cantiensis. a–c: V. 22960(1). a: Transverse fracture, showing c-shaped locule, dorsal infold, and sculptured endocarp, reflected light. b: Transverse digital section from micro-CT scan data. c: Surface view of ribbed endocarp extracted from micro-CT data. d: Transverse fracture, reflected light, V. 22955 (originally illustrated in pl. 25, fig. 4 of Reid and Chandler 1933). e, f: Transverse physical section, V. 22963(2) showing U-shaped locule and longitudinal dorsal infold. g–i reflected light. g: Detail from left of (d). h, i: Detail from right of (f). Scale bars 5 mm in (a–f), 1 mm in (g–i). in Mastixioid Fruits (Cornales) From The Early Eocene London Clay Flora: Morphology, Anatomy And Nomenclatural Revision

Text-fig. 4. Mastixia cf. oregonensis (R.A.SCOTT) TIFFNEY et HAGGARD from the London Clay, originally included within the concept of M. cantiensis. a–c: V. 22960(1). a: Transverse fracture, showing c-shaped locule, dorsal infold, and sculptured endocarp, reflected light. b: Transverse digital section from micro-CT scan data. c: Surface view of ribbed endocarp extracted from micro-CT data. d: Transverse fracture, reflected light, V. 22955 (originally illustrated in pl. 25, fig. 4 of Reid and Chandler 1933). e, f: Transverse physical section, V. 22963(2) showing U-shaped locule and longitudinal dorsal infold. g–i reflected light. g: Detail from left of (d). h, i: Detail from right of (f). Scale bars 5 mm in (a–f), 1 mm in (g–i).

opencc-by-4.0Aug 2022View details →
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Text-fig. 2. Tectocarya spp. a–n: Tectocarya grandis (E.REID et M.CHANDLER) comb. n. Holotype V.22968. a: Lateral view of broken endocarp, reflected light. b–d: Longitudinal views, surface renderings from micro-CT data. e: Translucent volume renderings. f: Apical view, surface rendering. g: View of transversely broken surface showing curved locule, reflected light. h–n: Successive digital transverse sections. Note septum in the dorsal infold (arrows). o, p: Tectocarya rhenana KIRCHH., Miocene of Germany, dorsal view and transverse section [Holotype of Mastixoidea tectocaryoides KIRCHH., Alfred Mine near Konzendorf, photo by Dieter Mai] (Synonym of T. rhenana MAI, 1993). q: T. rhenana transverse section. from Mine Alfred, Düren, Germany, coll. Claire A. Brown 1952, USNM 355632. r, s: Tectocarya sp. from late Eocene of Post, Oregon, USA, physical transverse section, reflected light. UF279-50014. [Surface views of same specimen shown in Manchester and McIntosh 2007: figs 62, 63]. Scale bars 1 cm in (a–r), 0.5 cm in (s). in Mastixioid Fruits (Cornales) From The Early Eocene London Clay Flora: Morphology, Anatomy And Nomenclatural Revision

Text-fig. 2. Tectocarya spp. a–n: Tectocarya grandis (E.REID et M.CHANDLER) comb. n. Holotype V.22968. a: Lateral view of broken endocarp, reflected light. b–d: Longitudinal views, surface renderings from micro-CT data. e: Translucent volume renderings. f: Apical view, surface rendering. g: View of transversely broken surface showing curved locule, reflected light. h–n: Successive digital transverse sections. Note septum in the dorsal infold (arrows). o, p: Tectocarya rhenana KIRCHH., Miocene of Germany, dorsal view and transverse section [Holotype of Mastixoidea tectocaryoides KIRCHH., Alfred Mine near Konzendorf, photo by Dieter Mai] (Synonym of T. rhenana MAI, 1993). q: T. rhenana transverse section. from Mine Alfred, Düren, Germany, coll. Claire A. Brown 1952, USNM 355632. r, s: Tectocarya sp. from late Eocene of Post, Oregon, USA, physical transverse section, reflected light. UF279-50014. [Surface views of same specimen shown in Manchester and McIntosh 2007: figs 62, 63]. Scale bars 1 cm in (a–r), 0.5 cm in (s).

opencc-by-4.0Aug 2022View details →
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Text-fig. 3. Mastixia parva E.REID et M.CHANDLER. a–g: Holotype, V. 22972. a: Ventral view (original illustration from pl. 25, fig. 13 of Reid and Chandler 1933), reflected light. b–g: from micro-CT data. b: Dorsal view of specimen in (a) now suffering from encrustation due to pyrite decay; isosurface rendering. c: Translucent volume rendering, dorsal view showing two limbs of the locule and longitudinal groove. d–g: Digital transverse sections at various positions showing c-shaped locule, longitudinal dorsal infold, endocarp wall, and degradational cracks. h, i: V. 22983(1). h: Dorsal view showing longitudinal infold. i: Physical transverse section showing c-shaped locule and longitudinal dorsal infold. Scale bars 5 mm in (a–h), applies also to (b–g), 2 mm in (i). in Mastixioid Fruits (Cornales) From The Early Eocene London Clay Flora: Morphology, Anatomy And Nomenclatural Revision

Text-fig. 3. Mastixia parva E.REID et M.CHANDLER. a–g: Holotype, V. 22972. a: Ventral view (original illustration from pl. 25, fig. 13 of Reid and Chandler 1933), reflected light. b–g: from micro-CT data. b: Dorsal view of specimen in (a) now suffering from encrustation due to pyrite decay; isosurface rendering. c: Translucent volume rendering, dorsal view showing two limbs of the locule and longitudinal groove. d–g: Digital transverse sections at various positions showing c-shaped locule, longitudinal dorsal infold, endocarp wall, and degradational cracks. h, i: V. 22983(1). h: Dorsal view showing longitudinal infold. i: Physical transverse section showing c-shaped locule and longitudinal dorsal infold. Scale bars 5 mm in (a–h), applies also to (b–g), 2 mm in (i).

opencc-by-4.0Aug 2022View details →
dryad40/100

Data from: Digital twin mathematical models suggest individualized hemorrhagic shock resuscitation strategies

<p><strong>Background:</strong> Optimizing resuscitation to reduce inflammation and organ dysfunction following human trauma-associated hemorrhagic shock is a major clinical hurdle. This is limited by the short duration of pre-clinical studies and the sparsity of early data in the clinical setting.</p> <p><strong>Methods:</strong> We sought to bridge this gap by linking preclinical data in the porcine model with clinical data from patients from the Prospective, Observational, Multicenter, Major Trauma Transfusion (PROMMTT) study via a three-compartment ordinary differential equation model of inflammation and coagulation.</p> <p><strong>Results:</strong> The model accurately predicts physiologic, inflammatory, and laboratory measures in both the porcine model and patients, as well as the outcome and time of death in the PROMMTT cohort. Model simulation suggests that resuscitation with plasma and red blood cells outperformed resuscitation with crystalloid or plasma alone, and that earlier plasma resuscitation reduced injury severity and increased survival time.</p> <p><strong>Conclusions:</strong> This workflow may serve as a translational bridge from pre-clinical to clinical studies in trauma-associated hemorrhagic shock and other complex disease settings.</p>

opencc-zeroMay 2024View details →
dryad40/100

Data from: Origins of mammalian vertebral function revealed through digital bending experiments

<p>Unravelling the functional steps that underlie major transitions in the fossil record is a significant challenge for biologists due to the difficulties of interpreting functional capabilities of extinct organisms. New computational modelling approaches provide exciting avenues for testing function in the fossil record. Here we conduct digital bending experiments to reconstruct vertebral function in non-mammalian synapsids, the extinct forerunners of mammals, to provide insights into the functional underpinnings of the synapsid-mammal transition. We estimate range of motion and stiffness of intervertebral joints in eight non-mammalian synapsid species alongside a comparative sample of extant tetrapods, including salamanders, reptiles, and mammals. We show that several key aspects of mammalian vertebral function evolved outside crown Mammalia. Compared to early diverging non-mammalian synapsids, cynodonts stabilized the posterior trunk against lateroflexion, while evolving axial twisting in the anterior trunk. This was later accompanied by posterior sagittal bending in crown mammals, and perhaps even therians specifically. Our data also supports the prior hypothesis that functional diversification of the mammalian trunk occurred via co-option of existing morphological regions in response to changing selective demands. Thus, multiple functional and evolutionary steps underlie the origin of remarkable complexity of the mammalian backbone.</p>

opencc-zeroJun 2024View details →
zenodo40/100

lxkahn/Hall-1965-data: Digitized data of Hall (1965)

<p>Digitized data tables and georeferenced sample localities of heavy and light mineral data for the Merced Formation and modern sediment samples from Hall (1965).</p>

opencc-by-4.0Jun 2024View details →
zenodo40/100

Dataset: Global X Data Center & Digital Infrastructure ETF (DTCR) Stock Performance

This dataset provides historical stock market performance data for specific companies. It enables users to analyze and understand the past trends and fluctuations in stock prices over time. This information can be utilized for various purposes such as investment analysis, financial research, and market trend forecasting.

opencc-zeroJun 2024View details →
zenodo40/100

Data of Digital Scholarly Edition of the Diary of the Travel of Heinrich XI. Reuß-Greiz 1740-1742

Open the record for dataset details and reuse information.

opencc-by-4.0Jul 2024View details →
zenodo40/100

Figure 3. Impact of the Boom in digital data in learning-Micro Learning: A Modernized Education System-

<p>Figure 3 portrays the research guiding the impact of the boom in digital data in knowledge codification. The current status shows that 80% of the respondents are interested in learning via electronic devices, followed by e-mails at 75%. 72% and 70% of respondents opt for video clips and sound and voice recording. 65% of the respondents selected images followed by graphical display at 61%. 50% of the respondents selected Journals. Further observation from the figure reveals that books and reference volumes had a very insignificant impact, as expected by merely 45% and 30% of the respondents. This directed us towards the necessity for micro learning, and encourages the increase of the usage of electronic devices.</p>

opencc-by-4.0Jan 2016View details →
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Prototyping 3D Virtual Learning Environments with X3D-based Content and Visualization Tools-Figure 11. Online accessible repository of digital data on cultural heritage with X3D models (STARC Web Repository, 2017, © Copyright 2017, STARC, Cyprus Institute. Used with permission)

<p>Prototyping can also include the development of toolkits for automatic content generation simulator, but in the case of an architectural environment, the components are too complex to be automatically generated. Furniture elements or the learning artifacts (i.e. content created by learners) can be converted to be viewed in X3D compatible browsers or included in online galleries (Figure 11). After functional and 3D content prototyping, certain components of the virtual campus can be easily modified and adapted as needed.</p>

opencc-by-4.0Apr 2018View details →
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A Genetic Algorithm Approach to Regenerate Image from a Reduce Scaled Image Using Bit Data Count-Figure 3. Data compression and image reconstruction (55:148 Digital Image Processing, 2017)

<p>There are several techniques which are normally divided into two categories lossy and lossless image compressions. In lossy compression, after recovery there are negligible difference present where lossless gives accurate image. Huffman encoding is very well known, which can provide optimal compression and decompression without error (55:148 Digital Image Processing, 2017). The basic idea of Huffman coding is to represent data by number of variable size, where more frequent info being represented by shorter number (55:148 Digital Image Processing, 2017). Currently the Lempel-Ziv (or Lempel-Ziv-Welch, LZW) algorithm for dictionary-based coding has got attention as a better compression algorithm (55:148 Digital Image Processing, 2017).</p>

opencc-by-4.0Apr 2018View details →
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Digital Scholarship services and supports - an overview from Irish Research and National Libraries - Data with Comments

<p>This dataset contains survey data with comments (cleaned, direct references to institutions removed) and broken down by survey&nbsp;question sections. Some of the data has been converted to counts where it was used to generate the charts.</p> <p>The data is the output of a 2018 CONUL (Ireland&rsquo;s consortium of research and national libraries) survey focusing on Digital Scholarship services and supports from a Irish Research and National Library&nbsp;perspective.</p>

opencc-by-4.0Feb 2019View details →
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Wikidata's linked data for cultural heritage digital resources: an evaluation based on the Europeana Data Model

<p>Wikidata is an open data source with many potential applications. Our study aims to evaluate the usability of Wikidata as a linked data source for acquiring richer descriptions of digital objects within the context of Europeana, a data aggregator from the cultural heritage domain. Specifically, we aim to crawl and convert Wikidata using the standard approaches and operations developed for the (Semantic) Web of Data, i.e. using technologies like linked data consumption and RDF(S)/OWL ontology expression and reasoning. We also seek to re-use existing &ldquo;semantic&rdquo; specifications, such as conversions to and from generic data models like Schema.org and SKOS. We have developed an experimental set-up and accompanying software to test the feasibility of this approach. We conclude that Wikidata&rsquo;s linked data is able to express an interesting level of semantics for cultural heritage, but quality can still be improved and a human operator still must assist linked data applications to interpret Wikidata&rsquo;s RDF.</p>

opencc-by-4.0Sep 2019View details →
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Continuous Digital Monitoring of Walking Speed in Frail Elderly Patients: Noninterventional Validation Study and Longitudinal Clinical Trial (Data for independent validation study)

<p>Digital technologies and advanced analytics have drastically improved our ability to capture and interpret health relevant data from patients. However, to date, limited data and results have been published detailing real-world patient compliance, demonstrating accuracy in target indications or examining what novel insights and clinical value can be derived. Here we present novel, digital mobility data from two studies: an independent, non-interventional validation study with elderly, naturally slow walking subjects, and a global, multi-site phase IIb clinical trial involving patients with age-related muscle loss and slow walking speed (sarcopenia). Based on these data, we validate the accuracy of a novel algorithm for capturing in-clinic and real-world gait speed in frail, slow-walking adults. We demonstrate the feasibility of continuous monitoring with a wearable inertial sensor in elderly adults in real-world settings, and propose minimum thresholds for compliance required for robust capture of gait behaviors in this population. We also show how simple, inferred contextual information, describing the length of a given walking bout, can explain some of the variation in real-world gait speed, and use this information to demonstrate for the first time a relationship between in-clinic performance and real-world gait speed behavior. This work lays a foundation for exploration of the clinical relevance and value of such measures and is a first step in building a more complete chain of evidence between standardized physical performance assessment, real-world behavior, and subjective perceptions of mobility, independence and health.</p> <p>This dataset contains data collected during the independent validation study: derived data from raw accelerometry data, and summary performance data.</p> <p>The full dataset, including raw accelerometry data, is available here:&nbsp;<a href="https://mueller-et-al-2019.s3.amazonaws.com/index.html">https://mueller-et-al-2019.s3.amazonaws.com/index.html</a></p>

opencc-by-4.0Oct 2019View details →

ScienceDex guides

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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record

ScienceDex for faculty

Your academic CV and NIH biosketch

Make your CV in your school's format and your NIH biosketch from it, then download both as Word files.