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1,936 results for “Harvard Forest”

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edi60/100

Tree Growth in Hemlock and Deciduous Forests at Harvard Forest HEM and LPH Towers 2000-2005

Tree growth was measured to determine tree ages and growth rates and to quantify carbon storage in these forests, and to detect changes in growth and carbon storage that could be associated with climate changes or historic disturbances.

openCC0Dec 2023View details →
edi60/100

PhenoCam Images and Canopy Phenology at the Harvard Forest EMS Tower since 2008

The PhenoCam Network uses imagery from digital cameras to track vegetation phenology and seasonal changes in vegetation activity in diverse ecosystems across North America and around the world. Imagery is uploaded to the PhenoCam server at the University of New Hampshire, where it is made publicly available in near-real time, every 30 minutes from sunrise to sunset, 365 days a year. The data are processed using simple image analysis tools to yield a measure of canopy greenness, from which phenological metrics are extracted, characterizing the start and end of the growing season. These transition dates have been shown to align well with on-the-ground observations of tree phenology at Harvard Forest (HF003). Long-term PhenoCam data can be used to track the impact of climate variability and change on the rhythm of the seasons. This dataset contains one mid-day image for each camera. Please see the PhenoCam Network website (http://phenocam.sr.unh.edu) for more information and additional images.

openCC0Dec 2023View details →
edi60/100

Litterfall in Hemlock Removal Experiment at Harvard Forest since 2005

Hemlock decline in New England is caused by direct and indirect effects of invasion of the hemlock woolly adelgid. Direct damage from the insect is causing gradual mortality of hemlock, and widespread harvesting of hemlock in advance of mortality, in contrast, causes immediate mortality and removal of biomass from the site. Although both processes affect thousands of acres of forest annually we have only a limited understanding of their effects on forest ecosystem function and productivity and the nature of the subsequent forest community. We anticipate that harvesting will yield different consequences than gradual mortality from the insect. Therefore we designed an experiment to simulate these contrasting impacts, by logging or girdling hemlock stands. Results from the experimental treatments will be compared to the changes observed in forests that are being infested by the adelgid, and can also be included in integrated analyses of a suite of large experiments that form a core component of the Harvard Forest LTER program.

openCC0Dec 2023View details →
edi60/100

20-Year Root Mass in Chronic Nitrogen Amendment Experiment at Harvard Forest 2008

Forests typically respond to nitrogen additions with increased productivity, hence a long-held paradigm was that chronic additions of anthropogenically-derived atmospheric deposition would have positive ecosystem effects. However, twenty years of work at the Harvard Forest Chronic N Deposition plots, and in other forest ecosystems as well, has shown that that this simplistic view is incomplete. For example, enhanced ammonium uptake increases soil acidity, leading to mobilization of aluminum, and loss of nutrient cations (e.g. Mg2+, Ca2+, and K+ ) all of which influence root mass, turnover, and activity. To address long-term impacts of N additions on forest root mass, we removed O-horizon (forest floor) samples from the Chronic N hardwood and red pine stands to quantify the total mass of roots. We found that long term N additions had contrasting results in the two forests. In the hardwood plots, total root mass (less than 2mm) increased from 0.167 + 0.026 (S.E.) kg m-2 in the control plot to 0.434 + 0.170 kg m-2 in the high N plots. In contrast, in the red pine stand, roots declined from 0.074 + 0.011 (S.E.) kg m-2 in the control plot to 0.031 + 0.016 kg m-2 in the high N plots. These data are in agreement with data for aboveground productivity at the Chronic N plots, which show stimulated growth in the hardwoods and severe growth declines and enhanced mortality in the pine stand.

openCC0Dec 2023View details →
edi60/100

Autumnal Litter Input in DIRT Litter Manipulation Experiment at Harvard Forest 2008

Climate change will alter forest ecosystem productivity, changing the quantity and quality of detrital inputs to soil and altering rates of soil organic matter (SOM) accumulation and stabilization. To examine changes in forest soil SOM pools, we have used the Detritus Input and Removal Treatments (DIRT) Project to alter organic matter input rates and sources (roots, leaves) to soils, allowing us to measure contributions of organic matter sources to long-term SOM storage at five temperate forests (Harvard Forest, HJ Andrews, Bousson (PA) Experimental Forest (BEF), U. Michigan Biological Station (UMBS), Síkfokut ILTER, Hungary). Organic matter inputs are altered by excluding or adding leaf inputs, or by excluding roots from forested plots. Soil respiration partitioning at HF, BEF, and UMBS shows that soil fertility controls the allocation of C to above- and belowground tissue. At UMBS, glacial outwash sandy soils are extremely low in N, and C released from root respiration plus root litter decomposition is 87% of total soil respiration. Conversely, at the N-rich BEF site, total belowground sources of CO2 are only 61% of soil respiration, with 47% attributed to root litter. These data suggest that at BEF, leaf litter, comprising only 39% of soil respiration, would be a more important source of long-term SOM than root litter. However, soil chemistry and radiocarbon data have shown us that long-term soil C storage is complex. The year 2010 represents the 20-year anniversary of the initiation of DIRT treatments at the Harvard Forest (2010), and we are therefore planning to conduct systematic sampling campaigns for a comprehensive study of changes in SOM quality after long-term manipulation of inputs. One objective is to quantify how 20 years of litter input alterations have affected SOM quantity and quality at the surface (0-20 cm) and deeper in the soil profile (20-100 cm). To uderstand these changes, we need to quantify the quantity and quality of aboveground litter inp

openCC0Dec 2023View details →
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Decomposition Dynamics in the Sarracenia Purpurea Microecosystem at Harvard Forest 2010

Ecological communities show great variation in species richness, composition and food web structure across similar and diverse ecosystems. Knowledge of how this biodiversity relates to ecosystem functioning is important for understanding the maintenance of diversity and the potential effects of species losses or gains on ecosystems. While research often focuses on how variation in species richness influences ecosystem processes, assessing species richness in a food web context can provide further insight into the relationship between diversity and ecosystem functioning and provide potential mechanisms underpinning this relationship. Here, we assessed how species richness and trophic diversity affect decomposition rates in a complete aquatic food web: the five trophic level web that occurs within water-filled leaves of the northern pitcher plant, Sarracenia purpurea. We identified a trophic cascade in which top-predators - larvae of the pitcher-plant mosquito - indirectly increased bacterial decomposition by preying on bactivorous protozoa. Our data also revealed a facultative relationship in which larvae of the pitcher-plant midge increased bacterial decomposition by shredding detritus. These important interactions occur only in food webs with high trophic diversity, which in turn only occurs in food webs with high species richness. We show that species richness and trophic diversity underlie strong linkages between food web structure and dynamics that influence ecosystem functioning. The importance of trophic diversity and species interactions in determining how biodiversity relates to ecosystem functioning suggests that simply focusing on species richness does not give a complete picture as to how ecosystems may change with the loss or gain of species.

openCC0Dec 2023View details →
edi60/100

Root and Mycorrhizal Respiration at Harvard Forest Soil Warming Experiments 2007-2008

Soil heating typically causes large initial increases in soil respiration, with the enhancement lessening over time. This transient response is attributed to rapid decomposition of labile soil C compounds in the first years of heating, but the potential role of changes in root and mycorrhizal respiration is not well understood. To assess the degree to which root respiration adjusts to warmer soil temperature regimes, specific root respiration rates (nmol CO2/g/s) are being measured in three soil warming experiments at Harvard Forest. Soils in the experiments had been heated since 1991, 2003 and 2006. Respiration rates for fine roots (less than 1 mm) from control and heated plots were measured both at a common reference temperature of 18 deg C and at the ambient soil temperature of the measurement date for the control and heated (+ 5 deg C) treatments. Mycorrhizal respiration is being assessed through the use of hyphal ingrowth bags which allow determination both mycorrhizal hyphal biomass and respiration rate. Changes in mycorrhizal community composition are also being investigated. Specific questions we will address include: Does rapid temperature acclimation occur in roots of large perennial woody plants? How do root biomass, root N concentration, and root respiration rates adjust to long-term changes in soil temperature and moisture and concomitant changes in N availability? How is mycorrhizal biomass and activity influenced by the effects of warmer soil temperatures on host C balance and soil N availability? How do the short- and long-term responses of roots and mycorrhizae to warming and associated changes in soil nutrient cycling affect soil CO2 efflux and C availability for aboveground NPP? Are the interrelationships between warmer soil temperature regimes and C fluxes to and from roots and mycorrhizae adequately described by current ecophysiological models?

openCC0Dec 2023View details →
edi60/100

Allelopathy of Frangula Alnus to Native New England Wetland Vegetation at Harvard Forest 2008

Glossy buckthorn (Frangula alnus), an invasive shrub from Eurasia, colonizes both upland and mesic sites in New England, USA, reducing the growth and survival of native tree saplings and lowering species richness. Although a generalist, buckthorn thrives particularly well along river, pond, and wetland margins, which are traditional habitat for speckled alder (Alnus incana ssp. rugosa), a native nitrogen-fixing shrub. As buckthorn’s dense, monospecific growth is typical of allelopaths, we wondered whether it chemically suppresses the growth of alder and other indigenous shrubs. We thus propagated three native shrub species: Alnus incana ssp. rugosa, Viburnum dentatum and Spiraea latifolia, in invasive buckthorn and native dogwood (Cornus amomum) root and leaf mulch. After seven weeks, alder grown in buckthorn root demonstrated significantly smaller basal diameter than alder grown in buckthorn leaf or other mulches. Therefore, putative buckthorn allelopathy to alder likely occurs through root exudation instead of leaf litter effects. Meadowsweet grown in buckthorn mulch, in contrast, was taller, thicker, and had more numerous leaves than meadowsweet grown in native mulch. These species-specific effects point to allelopathy as a mechanism by which buckthorn changes the structure of native plant communities.

openCC0Dec 2023View details →
edi60/100

Soil Arthropods in Hemlock Removal Experiment at Harvard Forest 2008

In eastern North American forests, eastern hemlock (Tsuga canadensis) is a foundation species. As hemlock is lost from forests due to the invasive hemlock woolly adelgid (Adelges tsugae) and pre-emptive salvage logging, the structure of assemblages of species associated with hemlock is expected to change. We manipulated hemlock canopy structure at hectare scales to investigate the effects of hemlock death on assemblages of ants, beetles, and spiders in a New England forest. Relative to reference hemlock stands, both in situ death of hemlock and logging and removal of hemlock altered composition and diversity of beetles and spiders, and logging increased the species richness and evenness of ant assemblages. Species composition of ant assemblages in disturbed habitats was non-random relative to the regional species pool, but we found no evidence that interspecific competition shaped the structure of ant, beetle or spider assemblages, in either manipulated or intact forest stands. Environmental filtering by hemlock appears to maintain low levels of species richness and evenness in forest stands, suggesting that the loss of hemlock due to the hemlock woolly adelgid or human activities will not likely lead to extirpations of ant, beetle, or spider species at local scales.

openCC0Dec 2023View details →
edi60/100

Barre Woods Soil Warming Experiment at Harvard Forest since 2001

Two of the major results of our original soil warming study were that: (1) warming stimulated the decay of a labile soil carbon pool; and (2) it also increased the availability of inorganic nitrogen to plants. Because of the small size of the original warming plots an important question we have not been able to answer conclusively is: Has the increase in available nitrogen led to an increase in carbon storage in the vegetation? And if yes, how much? In a systems context an additional question is: What is the balance between the carbon lost from the soil and the carbon stored in the vegetation in response to soil warming? We are now addressing these important questions with a new warming experiment in the Barre Woods area of the Harvard Forest. The Barre Woods site was chosen because of its similarities to the Prospect Hill site - stand age, tree species composition, and soil type. There is no evidence of a plow horizon at the Barre Woods site, though surrounding stone walls indicate past use as pastureland. Historical records indicate the site was destroyed during the 1938 hurricane and then regrew naturally. During the summer and fall of 2001 we buried 3.4 miles of heating cable in a 30 x 30m plot. Cables were buried at a 10cm depth, spaced 20cm apart. A second 30 x 30m area was delineated to serve as the control plot. Results from the original soil warming experiment confirmed that the soil disturbance associated with the installation of heating cables has had no effect on soil temperatures and only minor and variable impacts on soil moisture. In April 2002, we began a one-year period of baseline measurements before turning on the heat in the new megaplot. These measurements included nitrogen mineralization, trace gas fluxes (CO2, CH4, N2O), tree growth (dendrometer bands), an understory species survey, canopy foliage analysis (C:N, NIR), and lysimetry. Thermistors were installed in both plots to begin tracking soil temperatures. The baseline measurements have con

openCC0May 2025View details →
edi60/100

Proteolytic Enzyme Activity in Temperate Forest Soils at Harvard Forest and Pisgah State Forest 2007-2010

The objective of this research is to investigate the processes that limit or promote the activity and production of proteolytic enzymes in temperate forest soils. To meet this objective, we performed a series of integrated observations and experiments to investigate a conceptual model of proteolytic enzyme activity whereby activity is a function of the interaction between four parameters: soil temperature and moisture, substrate concentration, and the enzyme pool size. We used four dominant temperate forest tree species that differ in SOM chemistry and the enzymatic capabilities of their fungal symbionts as a model system. These four species differed in mycorrhizal association, with white ash (Fraxinus americana) and sugar maple (Acer saccharum) supporting arbuscular mycorrhizal (AM) fungi and eastern hemlock (Tsuga canadensis) and American beech (Fagus grandifolia) supporting ectomycorrhizal (ECM) fungi. Further, the ECM associated species have leaf litter and SOM that is characterized by higher ratios of C:N than the AM associated. Soil samples were collected two sites, one located at the Prospect Hill Tract of the Harvard Forest and the other at the Pisgah State Forest. The sites have similar land use history and stand age. Soils at both sites are inceptisols classified as Typic Dystrochrepts derived from glacial till overlying granite-schist-gneiss bedrock. Experimental plots dominated by one of four target tree species were established at each site. Stands of sugar maple (Acer saccharum) and American beech (Fagus grandifolia) were located in Pisgah. Stands of Eastern hemlock (Tsuga canadensis) and white ash (Fraxinus americana) were located in Harvard Forest. At a later date, plots were also established in a red oak (Quercus rubra) stand on Prospect Hill in the MES tower footprint. At each site we located six replicate, 8 m radius, monodominant plots that were based on the following criteria: (1) more than 80% of the standing basal area was composed of the targ

openCC0Dec 2023View details →
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CO2 Profile at Harvard Forest HEM and LPH Towers since 2009

Carbon dioxide profile measurements are designed to supplement eddy flux measurements in calculating the carbon exchange of a forest. In the case of the Harvard Forest flux towers, the change in CO2 storage between the ground and the height of the eddy flux system during each half hour must be added to the eddy flux measured above the forest to determine the total carbon exchange. The profile measurements are also necessary in order to calculate CO2 movement by advection, or horizontal air transport. The amount of CO2 removed from a particular site by advection is the product of the total CO2 within the air a given range of height above the ground, and the average velocity of airflow parallel to the ground surface within that height range.

openCC0Mar 2025View details →
edi60/100

Simulating Intrastand Movement of Hemlock Woolly Adelgid at Harvard Forest 2009

The hemlock woolly adelgid (HWA), Adelges tsugae Annand (Hemiptera: Adelgidae), has spread rapidly across the eastern USA since its introduction from Japan 60 years ago, causing widespread mortality of both eastern hemlock [Tsuga canadensis (L.) Carriere] and Carolina hemlock [Tsuga caroliniana Engelm. (Pinaceae)]. Although HWA spread patterns have been repeatedly analyzed at regional scales, comparatively little is known about its dispersal potential within and between hemlock stands. As the small size and clonal nature of HWA make it nearly impossible to identify the source populations of dispersing individuals, we simulated intrastand HWA movement in the field by monitoring the movement of clumps of fluorescent powder that are slightly larger than HWA, but much easier to detect in the forest understory. Using three hemlock trees with three colors of fluorescent powder as source populations, we detected dispersal events at the farthest distances within our trapping array (400 m). However, more than 90% of dispersal events were less than 25 m. Dispersal patterns were similar from all three source trees and the distribution of dispersal distances in all cases could be described by lognormal probability density functions with mean dispersal distance of 12-14 m, suggesting that dispersal was relatively independent of location of source trees. In general, we documented tens of thousands of passive dispersal events in the forest understory despite the presence of a dense forest canopy. Thus, even under relatively light-wind conditions, particles of similar dimensions to HWA are capable of intra-stand movement, suggesting that a large population of HWA could rapidly infest other trees within several hundred meter radius, or beyond.

openCC0Dec 2023View details →
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Effects of Warming on Tree Species Recruitment at Harvard Forest and Duke Forest since 2009

Climate change is restructuring forests of the United States, although the details of this restructuring are currently uncertain. Rising temperatures of 2 to 8 deg C and associated changes in soil moisture will shift the competitive balance between species that compete for light and water, changing their abilities to produce seed, germinate, grow, and survive. We are using large scale experiments to determine the effects of warming on the most sensitive stage of species distributions, i.e., recruitment, in mixed deciduous forests in southern New England and in the Piedmont region of North Carolina. Two questions organize our proposed research: (1) Might temperate tree species near the "warm" end of their range in the eastern United States decline in abundance during the coming century due to projected warming? and (2) Might trees near the "cool" end of their range in the eastern United States increase in abundance, or extend their range, during the coming 100 years because of projected warming? To explore these questions, we are exposing seedlings to air and soil warming experiments in two eastern deciduous forest sites; one at the Harvard Forest (HF) in central Massachusetts, and the other at the Duke Forest (DF) in the Piedmont region of North Carolina. We focus on tree species common to both Harvard and Duke Forests (such as red, black, and white oaks), those near northern range limits (black oak, tulip poplar), and those near southern range limits (yellow birch, sugar maple). At each site, we plant seeds in common gardens established in temperature-controlled, open-top chambers. The experimental design is replicated and fully factorial and involves three temperature regimes (ambient, +3 deg C and +5 deg C) and two light regimes (closed forest canopy (low light) and gap conditions (high light)). Measured variables include Fall/Spring responses to temperature and mid-Summer responses to low soil moisture. This research will advance our understanding of how the abu

openCC0Dec 2023View details →
edi60/100

Vegetation Response in Simulated Hurricane Experiment at Harvard Forest since 1990

Wind disturbance profoundly shapes temperate forests but few studies have evaluated patterns and mechanisms of long-term forest dynamics following major windthrows. In 1990, we initiated a large hurricane simulation experiment in a 0.8 ha manipulation (pulldown) and 0.6 ha control area of a maturing Quercus rubra-Acer rubrum forest in New England. We toppled 276 trees in the pulldown, using a winch and cable, in the northwesterly direction of natural treefall from major hurricanes. Eighty percent of canopy trees and two-thirds of all trees greater than 5 cm dbh suffered direct and indirect damage. We used twenty years of measurements to evaluate the trajectory and mechanisms of forest response after intense disturbance. Based on the patch size and disturbance magnitude, we expected pioneer tree and understory species to drive succession. The first decade of analyses emphasized tree seedling establishment and sprouting by damaged trees as the dominant mechanisms of forest recovery in this extensive damaged area. However, despite 80% canopy damage and 8000 m2 patch size, surviving overstory and advance regeneration controlled longer-term forest development. Residual oaks make up 42% of stand basal area after 20 years. The new cohort of trees, dominated by black birch advance regeneration, contributes 30% of stand basal area. There were shifts in understory vegetation composition and cover, but few species were gained or lost after 20 years. Stand productivity rebounded quickly (litterfall recovered to pre-disturbance levels in six years), but we predict that basal area in the pulldown will lag behind the control (which gained 6 m2/ha over 20 years) for decades to come. This controlled experiment showed that although the scale and intensity of damage were great, abundant advance regeneration, understory vegetation, and damaged trees remained, allowing the forest to resist changes in ecosystem processes and invasion by new species.

openCC0Nov 2023View details →
edi60/100

Ungulate-Disturbance Interactions in Hemlock Ecosystems at Harvard Forest 2012-2013

Densities of ungulates are often associated with recent forest disturbances such as fire, logging and insect outbreaks, as increased resources stimulate tree regeneration, leading to abundant available browse. Despite the often significant role that ungulates play in disturbed forests, surprisingly little is known about ungulate-disturbance interactions, and ungulate herbivory is often excluded from examinations of forest response to disturbance. In the Northeastern United States, a large-scale insect outbreak, the hemlock wooly adelgid (HWA), has begun to have important effects on hemlock forests both directly and indirectly (i.e., by preemptive salvage logging). No studies have examined the interactions of both moose and deer activity with these associated canopy disturbances. Our objectives are twofold: to determine (1) the response of ungulates to varying disturbance types and intensities and (2) the influence of ungulate interactions with canopy disturbance on vegetation, other biota, and ecosystem processes. We will examine the relative abundance of moose and deer in four treatments (2 replicates) at the Hemlock Removal Experiment using three indices of ungulate activity: pellet group density, evidence of past browsing on seedlings and saplings, and the occurrence of animals using game cameras. We will also monitor the response of vegetation to ungulate browsing by sampling woody and herbaceous vegetation in fenced exclosures and paired controls in disturbed and undisturbed plots.

openCC0Jan 2024View details →
edi60/100

Thresholds and Tipping Points in a Sarracenia Microecosystem at Harvard Forest 2012-2013

The primary goal of this project is to determine experimentally the amount of lead time required to prevent a state change. To achieve this goal, we will (1) experimentally induce state changes in a natural aquatic ecosystem - the Sarracenia microecosystem; (2) use proteomic analysis to identify potential indicators of states and state changes; and (3) test whether we can forestall state changes by experimentally intervening in the system. This work uses state-of-the art molecular tools to identify early warning indicators in the field of aerobic to anaerobic state changes driven by nutrient enrichment in an aquatic ecosystem. The study tests two general hypotheses: (1) proteomic biomarkers can function as reliable indicators of impending state changes and may give early warning before increasing variances and statistical flickering of monitored variables; and (2) well-timed intervention based on proteomic biomarkers can avert future state changes in ecological systems.

openCC0Dec 2023View details →
edi60/100

Microclimate at Harvard Forest HEM, LPH and EMS Towers since 2005

Microclimatic data are collected continuously within footprint areas of the flux towers in order to (1) understand relationships between climatic and microclimatic conditions and carbon dioxide and water vapor exchange between forest and atmosphere, (2) to develop predictive models for the exchange rates of these gases, based on microclimate data, (3) detect long-term trends in climate and microclimate at the sites and (4) determine whether the response of carbon dioxide and water vapor exchange processes to climate or microclimate is changing over time. The primary climatic and microclimatic variables measured at these sites include: above-canopy photosynthetically active radiation (PAR), forest understory PAR at 1 m height, total net radiation exchange measured above the forest canopy, air temperature and relative humidity above the forest canopy, forest understory air temperature at 20 cm and 1 m above ground level (shielded but not ventilated thermocouple sensors, used only to estimate nighttime understory air temperature), soil temperature at 10 cm depth, and soil moisture.

openCC0Mar 2025View details →
edi60/100

Fuel Loading in Simulated Hurricane Experiment at Harvard Forest since 1993

Wind disturbance profoundly shapes temperate forests but few studies have evaluated patterns and mechanisms of long-term forest dynamics following major windthrows. In 1990, we initiated a large hurricane simulation experiment in a 0.8 ha manipulation (pulldown) and 0.6 ha control area of a maturing Quercus rubra-Acer rubrum forest in New England. We toppled 276 trees in the pulldown, using a winch and cable, in the northwesterly direction of natural treefall from major hurricanes. Eighty percent of canopy trees and two-thirds of all trees greater than 5 cm dbh suffered direct and indirect damage. An enormous input of dead wood was one result of the manipulation. Many perceive an increased risk of wildfire after trees are blown down, but this depends on the amount, size, and persistence of the dead wood inputs.

openCC0Dec 2023View details →
edi60/100

Mark-Recapture of Rodent and Shrew Populations in a Declining Hemlock Stand at Harvard Forest 2012

Eastern Hemlocks (Tsuga canadensis) are foundation species, which are known to have a large influence on the species composition and ecosystem dynamics. The purpose of this study was to understand how rodent species richness and composition differed among different hemlock treatments consisting of intact forest, logged forest, and invaded hemlock stands in the Harvard Forest of Petersham, MA. Sherman live traps were arranged on 7x7m grids covering 0.49ha in four different hemlock treatments that were established in 2003: 1) the logged treatment, where commercial trees were removed 2) the girdled treatment, where the hemlocks were girdled using a chainsaw, thus killing the trees, and mimicking the effects of the woolly adelgid, an invasive insect 3) the hemlock control which is where hardwoods are at least 70% hemlocks, and 4) the hardwood control, where other hardwood species are dominate. Animals were marked and recaptured from June-July. Using Schnabel methods for population estimate, there appeared to be a shift in the population from more abundant Gapper’s Red-backed vole, Clethrionomys gapperi in the logged and girdled treatments to white-footed and deer mice (Peromyscus spp) in the hemlock and hardwood control plots. This shift in population may indicate that hemlocks support Peromyscus spp over voles. The species richness and overall population dynamic of these rodents surveyed may lead to a greater understanding as to the potential affect they may have on the seed dispersal in these plots and could account for many interactions between the vegetation and the animals also present.

openCC0Dec 2023View details →

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

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behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

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DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

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electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

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The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

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OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

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