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163
datasets available to search
ShareScore release 0.9.0
Dataset results
163 results for “HiChIP”
H3K27ac HiChIP analysis in BALL cells
GEO Series GSE199365. Homo sapiens. 5 samples. Type: Other.
Genome wide SMC1A-mediated chromatin looping changes (HiChIP) in TAE684-sensitive, resistant, resistant shBORIS and resistant shGFP Kelly cells.
GEO Series GSE126792. Homo sapiens. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Characterization the crosstalk between P300 enhancers and 3D genome in murine cardiomyocyte development and maturation by H3K27ac HiChIP.
GEO Series GSE222160. Mus musculus. 4 samples. Type: Other.
EBNA Leader Protein is required to reshape chromatin architecture during B cell transformation by Epstein-Barr Virus (HiChIP)
GEO Series GSE276488. Homo sapiens. 6 samples. Type: Other.
Cohesin HiChIP datasets of pluripotent and surface ectoderm cells with and without p63
GEO Series GSE120294. Homo sapiens. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Batf-mediated Epigenetic Control of Effector CD8+ T Cell Differentiation (HiChIP)
GEO Series GSE192387. Mus musculus. 6 samples. Type: Other.
CRISPR screens identify gene targets at breast cancer risk loci [HiChIP]
GEO Series GSE219164. Homo sapiens. 4 samples. Type: Other.
HSFA1a controls plant heat stress response through its action on the 3D chromatin reorganization of enhancer-promoter interactions [HiChIP]
GEO Series GSE206361. Solanum lycopersicum. 2 samples. Type: Other.
FOXA1 Shapes the Chromatin State of ILC and Drives Differential Response to Aromatase Inhibitors and Tamoxifen [HiChIP-seq]
GEO Series GSE152366. Homo sapiens. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Cohesin protein STAG2 regulates expression of IRF9 and interferon signaling in melanoma via enhancer loop reprogramming [HiChIP]
GEO Series GSE156772. Homo sapiens. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genome-wide Transcription Factor binding maps reveal cell-specific changes in the regulatory architecture of human HSPC [HiChIP]
GEO Series GSE231426. Homo sapiens. 8 samples. Type: Other.
The chromatin and regulatory properties of pluripotency-associated poised enhancers are conserved in vivo [HiChIP]
GEO Series GSE160656. Mus musculus. 13 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Topological demarcation by HMGB2 is disrupted early upon senescence entry and induces CTCF clustering across cell types [HiChIP]
GEO Series GSE100856. Homo sapiens. 4 samples. Type: Other.
Epstein-Barr virus nuclear antigen 2 (EBNA2) extensively rewires the human chromatin landscape at autoimmune risk loci [HiChIP]
GEO Series GSE179755. Homo sapiens. 6 samples. Type: Other.
Rewiring of the promoter-enhancer interactome and regulatory landscape in glioblastoma orchestrates gene expression underlying the neurogliomal synaptic communication [HiChIP]
GEO Series GSE217346. Homo sapiens. 15 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Small-molecule-induced epigenetic rejuvenation overcomes myelinogenic barriers and stimulates myelin repair [HiChIP]
GEO Series GSE232954. Rattus norvegicus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
The three-dimensional structure of the EBV genome plays a crucial role in regulating viral gene expression in EBVaGC [HiChIP]
GEO Series GSE239992. Homo sapiens; human gammaherpesvirus 4. 4 samples. Type: Other.
Oncogenic Notch promotes long-range regulatory interactions within hyperconnected 3D cliques [HCC1599_HiChIP]
GEO Series GSE116872. Homo sapiens. 2 samples. Type: Other.
EWS-WT1 fusion isoforms establish oncogenic programs and therapeutic vulnerabilities in Desmoplastic Small Round Cell Tumors [HiChIP]
GEO Series GSE212978. Homo sapiens. 3 samples. Type: Other.
Dynamic CTCF occupancy during differentiation rewires cis-regulatory module interactions essential for development [HiChIP]
GEO Series GSE131054. Homo sapiens. 3 samples. Type: Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.