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130
datasets available to search
ShareScore release 0.9.0
Dataset results
130 results for “Human microbiome”
Deciphering the Impact of Exposures From the Gut Microbiome-derived Molecular Complex in Human Health and Disease
ClinicalTrials.gov study NCT04847011. IPD Sharing: UNDECIDED. Countries: 1. Publications: 1.
Assessing the Role of a Fermented Soy Extract in Inflammation and the Human Microbiome
ClinicalTrials.gov study NCT02656056. IPD Sharing: UNDECIDED. Countries: 1. Publications: 1.
Comparing Impacts of Donor Human Milk to Formula Supplementation on the Gut Microbiome of Full-term Infants
ClinicalTrials.gov study NCT05815433. IPD Sharing: NO. Countries: 1. Publications: 21.
Human Milk and Its Effect on Infant's Metabolism and Infant Gut Microbiome
ClinicalTrials.gov study NCT05111990. IPD Sharing: Not stated. Countries: 1. Publications: 1.
The Effects of Dietary Fiber on the Gut Microbiome and HDL Particles of Human Subjects
ClinicalTrials.gov study NCT03785860. IPD Sharing: NO. Countries: 1. Publications: 2.
Safety and Efficacy of Anaerobic Cultivated Human Intestinal Microbiome Transplantation in Systemic Sclerosis (ReSScue)
ClinicalTrials.gov study NCT04300426. IPD Sharing: YES. Countries: 1. Publications: 14.
Microbiome Modulation by PEMF on Plaque Induced Mucositis in Human Jaws
ClinicalTrials.gov study NCT07045636. IPD Sharing: NO. Countries: 1. Publications: 5.
Microbiome of the Ageing Gut and Its Effect on Human Gut Health and Cognition.
ClinicalTrials.gov study NCT04199195. IPD Sharing: YES. Countries: 1. Publications: 1.
Data from: Microbial community composition interacts with local abiotic conditions to drive colonization resistance in human gut microbiome samples
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Data from: Metatranscriptomics of the human oral microbiome during health and disease
The human microbiome plays important roles in health, but when disrupted these same indigenous microbes can cause disease. The composition of the microbiome changes during the transition from health to disease; however, these changes are often not conserved among patients. Since microbiome-associated diseases like periodontitis cause similar patient symptoms despite inter-patient variability in microbial community composition, we hypothesized that human-associated microbial communities undergo conserved changes in metabolism during disease. Here we used patient-matched healthy and diseased samples to compare gene expression of 160,000 genes in healthy and diseased periodontal communities. We show that healthy and diseased communities exhibit defined differences in metabolism that are conserved between patients. In contrast, individual species metabolic gene expression was highly variable between patients. These results demonstrate that despite high inter-patient variability in microbial composition, diseased communities display conserved metabolic profiles that are generally accomplished by a patient-specific cohort of microbes.
Data from: Integration of 168,000 samples reveals global patterns of the human gut microbiome
<p>The data and code in this archive was used to generate the analyses and figures from the revised version of "Integration of 168,000 samples reveals global patterns of the human gut microbiome." The first version is available as <a href="https://doi.org/10.1101/2023.10.11.560955">a bioRxiv preprint</a>. Code for the text-mining work is <a href="https://github.com/krishnanlab/microbiome-metadata-annotation">available on GitHub</a>.</p> <p> </p>
Does the Human Gut Microbiome Serve as a Novel Personalized Therapeutic Target for Coronary Atherosclerosis?
ClinicalTrials.gov study NCT03009565. IPD Sharing: Not stated. Countries: 0. Publications: 15.
Assessing the Potential Role of the Gut Microbiome in Modulating Physical Abilities in Humans
ClinicalTrials.gov study NCT05024188. IPD Sharing: NO. Countries: 0. Publications: 2.
Human Microbiome and Healthcare Associated Infections - Nursing Home Dwelling Older Veterans
ClinicalTrials.gov study NCT04218799. IPD Sharing: NO. Countries: 1. Publications: 0.
Mechanism of Microbiome-induced Insulin Resistance in Humans (Aim 1)
ClinicalTrials.gov study NCT02124759. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Data from: Metatranscriptomics of the human oral microbiome during health and disease
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Data from: Resident microbial communities inhibit growth and antibiotic resistance evolution of Escherichia coli in human gut microbiome samples
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HuMiChip2 for Strain Level Identification and Functional Profiling of Human Microbiomes
GEO Series GSE86162. human metagenome. 18 samples. Type: Other.
Longitudinal Multi’omics of the Human Microbiome in Inflammatory Bowel Disease
GEO Series GSE111889. Homo sapiens. 251 samples. Type: Expression profiling by high throughput sequencing.
Xenobiotics shape the physiology and gene expression of the active human gut microbiome
GEO Series GSE38151. human gut metagenome. 72 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.