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206 results for “Litophyton”
FIGURE 61 in The genus Litophyton Forskål, 1775 (Octocorallia: Alcyonacea: Nephtheidae) from Australia
FIGURE 61. Lateral views polyp armature of Litophyton species: a, L. carnatum n. sp., holotype NTM C4100; b, L. grandis n. sp., holotype NTM C5419, c, L. pandoraensis n. sp., holotype NTM C4053.
FIGURE 49 in The genus Litophyton Forskål, 1775 (Octocorallia: Alcyonacea: Nephtheidae) from Australia
FIGURE 49. Litophyton type specimens: a, L. simplex n. sp., holotype NTM C3949; b, L. snakeensis n. sp., holotype NTM C10439; c, L. squamatum n. sp., holotype NTM C 4136. Scale at c 1 cm, a-b, natural size.
FIGURE 15. Litophyton graafae n in The genus Litophyton Forskål, 1775 (Octocorallia: Alcyonacea: Nephtheidae) from Australia
FIGURE 15. Litophyton graafae n. sp., holotype NTM C4095; a-b, sclerites of surface layer top of stalk; c, sclerites of surface layer base of stalk; d-e, spindles of interior base of stalk; f, tuberculation of interior base stalk spindle. Scale at d also applies to b; scale at c to all others.
FIGURE 10. Litophyton elfordensis n in The genus Litophyton Forskål, 1775 (Octocorallia: Alcyonacea: Nephtheidae) from Australia
FIGURE 10. Litophyton elfordensis n. sp., paratype NTM C4022 a, abaxial point spindles; b, lateral point spindle; c, tentacle scales; d, polyp stalk rods; e, part of supporting bundle spindle; f, sclerites of surface layer top of stalk, h-g, spindles of interior base of stalk; i, tuberculation of interior base stalk spindle. Scale at b also applies to c-d; scale at a also applies to e, f, h.
FIGURE 5. Litophyton daviesensis n in The genus Litophyton Forskål, 1775 (Octocorallia: Alcyonacea: Nephtheidae) from Australia
FIGURE 5. Litophyton daviesensis n. sp., holotype NTM C4149; a, abaxial point spindles; b, lateral point spindle; c, tentacle rods; d-e, polyp stalk rods; f, part of supporting bundle spindles; g, spindles of surface layer top of stalk, h-i, sclerites of surface layer base of stalk; j, spindles of interior base of stalk; k, tuberculation of interior base stalk spindle. Scale at b also applies to c-d, h; scale at a also applies to f, i; scale at j also applies to g.
FIGURE 7. Litophyton dipensis n in The genus Litophyton Forskål, 1775 (Octocorallia: Alcyonacea: Nephtheidae) from Australia
FIGURE 7. Litophyton dipensis n. sp., holotype NTM C362; a, sclerites of surface layer base of stalk; b-c, spindles of interior base of stalk; d, tuberculation of interior base stalk spindle.
FIGURE 12 in The genus Litophyton Forskål, 1775 (Octocorallia: Alcyonacea: Nephtheidae) from Australia
FIGURE 12. Litophyton type specimens: a, L. dipensis n. sp., holotype NTM C362; b, L. myrmidonensis n. sp., holotype NTM C994; c, L. pseudorowleyensis n. sp., holotype NTM C4013; d, L. robustum (Kükenthal, 1895), holotype SMF 65. Scales at b 1 cm, at d 2 cm; a, c, natural size.
FIGURE 2 in The genus Litophyton Forskål, 1775 (Octocorallia: Alcyonacea: Nephtheidae) from Australia
FIGURE 2. Lateral views polyp armature of Litophyton; a, L. cockburnensis n. sp., holotype NTM C10288; b, L. daviesensis n. sp., holotype NTM C4149; c, L. dipensis n. sp., holotype NTM C362; d-h, L. elfordensis n. sp., d-e, holotype NTM C193, f, paratype NTM C192; g, paratype NTM C4022; h, paratype NTM C4135.
FIGURE 8. Litophyton elfordensis n in The genus Litophyton Forskål, 1775 (Octocorallia: Alcyonacea: Nephtheidae) from Australia
FIGURE 8. Litophyton elfordensis n. sp., holotype NTM C193 a, abaxial point spindles; b, lateral point spindles; c, tentacle scales; d, polyp stalk rods; e, supporting bundle spindles, one partly; f-g, sclerites of surface layer top of stalk, i, sclerites of surface layer base of stalk; j-k, spindles of interior base of stalk; l, tuberculation of interior base stalk spindle. Scale at b also applies to c-d, f; scale at j also applies to h.
FIGURE 6. Litophyton dipensis n in The genus Litophyton Forskål, 1775 (Octocorallia: Alcyonacea: Nephtheidae) from Australia
FIGURE 6. Litophyton dipensis n. sp., holotype NTM C362; a, abaxial point spindles; b, lateral point spindle; c, tentacle scales; d, polyp stalk rods; e, supporting bundle spindles, two partly; f-g, sclerites of surface layer top of stalk. Scale at b also applies to c-d.
FIGURE 3. Litophyton cockburnensis n in The genus Litophyton Forskål, 1775 (Octocorallia: Alcyonacea: Nephtheidae) from Australia
FIGURE 3. Litophyton cockburnensis n. sp., holotype NTM C10288; a, abaxial point spindles; b, lateral and adaxial point sclerites; c, tentacle scales; d, polyp stalk rods; e, part of supporting bundle spindle; f, xeniid type sclerites; g, sclerites of surface layer top of stalk, h, sclerites of surface layer base of stalk; i, tuberculation of interior base stalk spindle; j-k, spindles of interior base of stalk. Scale at b also applies to c-d; scale at e also applies to g-h, k.
AntiSMASH results of the genome sequences of four novel Endozoicomonas strains associated with the octocoral Litophyton in a long-term aquarium facility
<p>Secondary Metabolite-Encoding Biosynthetic Gene Cluster (SM-BGC) annotation files from antiSMASH bacterial version 7.1.0 for four <em>Endozoicomonas</em> strains associated with the tropical octocoral Litophyton in a long-term aquarium facility. Data corresponds to the assemblies of NE35, NE40, NE41 and NE43, available under the BioProject accession numbers <a href="https://www.ncbi.nlm.nih.gov/bioproject/1075803">PRJNA1075803</a>, <a href="https://www.ncbi.nlm.nih.gov/bioproject/1075804">PRJNA1075804</a>, <a href="https://www.ncbi.nlm.nih.gov/bioproject/1075805">PRJNA1075805</a> and <a href="https://www.ncbi.nlm.nih.gov/bioproject/1075806">PRJNA1075806</a>, respectively.<u> </u></p> <p>To easily and interactively review the results, please download the genome you wish to examine, extract the entire contents of the folder, and open the HTML file named "Results".</p> <p> </p> <p>This dataset is part of the following study:</p> <p>Marques M, da Silva DMG, Santos E, Baylina N, Peixoto R, Kyrpides NC, Woyke T, Whitman WB, Keller-Costa T, Costa R. 2024. Genome sequences of four novel <em>Endozoicomonas </em>strains associated with a tropical octocoral in a long-term aquarium facility. Microbiology Resource Announcements</p>
COG and Pfam annotation results of the genome sequences of four novel Endozoicomonas strains associated with the octocoral Litophyton in a long-term aquarium facility
<p>COG and Pfam annotation files from DOE-JGI Microbial Genome Annotation Pipeline (MGAP) version 4(1), for four <em>Endozoicomonas</em> strains associated with the tropical octocoral Litophyton in a long-term aquarium facility. Data correspond to the assemblies of NE35, NE40, NE41, and NE43, available under the BioProject accession numbers <a href="https://www.ncbi.nlm.nih.gov/bioproject/1075803">PRJNA1075803</a>, <a href="https://www.ncbi.nlm.nih.gov/bioproject/1075804">PRJNA1075804</a>, <a href="https://www.ncbi.nlm.nih.gov/bioproject/1075805">PRJNA1075805</a> and <a href="https://www.ncbi.nlm.nih.gov/bioproject/1075806">PRJNA1075806</a>, respectively. Results were submitted to the Integrated Microbial Genomes and Microbiomes system v7 (IMG/M) (2) for comparative analysis. The genome annotations can be interactively accessed on IMG/M (https://img.jgi.doe.gov/cgi-bin/m/main.cgi) using the following identifiers: 8036267134 (strain NE35), 8036277142 (strain NE40), 8045494135 (strain NE41); 8036272146 (strain NE43). </p> <p>This dataset is part of the following study:</p> <p>Marques M, da Silva DMG, Santos E, Baylina N, Peixoto R, Kyrpides NC, Woyke T, Whitman WB, Keller-Costa T, Costa R. 2024. Genome sequences of four novel <em>Endozoicomonas </em>strains associated with a tropical octocoral in a long-term aquarium facility. Microbiology Resource Announcements</p> <p> </p> <p>Other reference sources:</p> <p>(1) Huntemann M, Ivanova NN, Mavromatis K, James Tripp H, Paez-Espino D, Palaniappan K, Szeto E, Pillay M, Chen IMA, Pati A, Nielsen T, Markowitz VM, Kyrpides NC. 2015. The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4). Stand Genomic Sci 10:1–6.</p> <p>(2) Chen IMA, Chu K, Palaniappan K, Ratner A, Huang J, Huntemann M, Hajek P, Ritter SJ, Webb C, Wu D, Varghese NJ, Reddy TBK, Mukherjee S, Ovchinnikova G, Nolan M, Seshadri R, Roux S, Visel A, Woyke T, Eloe-Fadrosh EA, Kyrpides NC, Ivanova NN. 2023. The IMG/M data management and analysis system v.7: content updates and new features. Nucleic Acids Res 51:D723–D732.</p>
Figure 96 from: van Ofwegen LP (2016) The genus Litophyton Forskål, 1775 (Octocorallia, Alcyonacea, Nephtheidae) in the Red Sea and the western Indian Ocean. ZooKeys 567: 1-128. https://doi.org/10.3897/zookeys.567.7212
Figure 96 - Litophyton viridis (May, 1898), ZMTAU Co 26193. A tentacle rodlets B polyp body spindles C supporting bundle spindles D–E sclerites surface layer top of stalk.
Figure 94 from: van Ofwegen LP (2016) The genus Litophyton Forskål, 1775 (Octocorallia, Alcyonacea, Nephtheidae) in the Red Sea and the western Indian Ocean. ZooKeys 567: 1-128. https://doi.org/10.3897/zookeys.567.7212
Figure 94 - Litophytum acutifolium Kükenthal, 1913, ZMB 6683, part of holotype. A sclerites surface layer base of stalk B spindles interior base of stalk.
Figure 91 from: van Ofwegen LP (2016) The genus Litophyton Forskål, 1775 (Octocorallia, Alcyonacea, Nephtheidae) in the Red Sea and the western Indian Ocean. ZooKeys 567: 1-128. https://doi.org/10.3897/zookeys.567.7212
Figure 91 - Litophytum sanderi (May, 1899), holotype ZMH C2390. A sclerites surface layer base of stalk B spindles interior base of stalk.
Figure 90 from: van Ofwegen LP (2016) The genus Litophyton Forskål, 1775 (Octocorallia, Alcyonacea, Nephtheidae) in the Red Sea and the western Indian Ocean. ZooKeys 567: 1-128. https://doi.org/10.3897/zookeys.567.7212
Figure 90 - Litophytum sanderi (May, 1899), holotype ZMH C2390. A lateral views of polyp armature B polyp body sclerites C supporting bundle spindles D sclerites surface layer top of stalk E spindles interior top of stalk. Scale at D also applies to C and E.
Figure 89 from: van Ofwegen LP (2016) The genus Litophyton Forskål, 1775 (Octocorallia, Alcyonacea, Nephtheidae) in the Red Sea and the western Indian Ocean. ZooKeys 567: 1-128. https://doi.org/10.3897/zookeys.567.7212
Figure 89 - Litophyton stuhlmanni (May, 1898), syntype ZMH C2391. A lateral views of polyp armature B polyp sclerites C sclerites surface layer top of stalk D sclerites surface layer base of stalk E spindles, interior base of stalk. Scale at D also applies to C and E.
Figure 88 from: van Ofwegen LP (2016) The genus Litophyton Forskål, 1775 (Octocorallia, Alcyonacea, Nephtheidae) in the Red Sea and the western Indian Ocean. ZooKeys 567: 1-128. https://doi.org/10.3897/zookeys.567.7212
Figure 88 - Litophyton viridis (May, 1898); syntype ZMH 2397. A sclerites surface layer top of stalk B sclerites surface layer base of stalk C spindles interior stalk.
Figure 81 from: van Ofwegen LP (2016) The genus Litophyton Forskål, 1775 (Octocorallia, Alcyonacea, Nephtheidae) in the Red Sea and the western Indian Ocean. ZooKeys 567: 1-128. https://doi.org/10.3897/zookeys.567.7212
Figure 81 - Litophyton striatum (Kükenthal, 1903), RMNH Coel. 8048, holotype Nephthea galbuloides. A tentacle rodlets and one small polyp body spindle B polyp body spindles C spindles of supporting bundle D–E sclerites of surface layer top of stalk F interior base stalk spindle. Scale at C also applies to B.
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