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52 results for “Matrix models”

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geo24/100

Comprehensive Characterization of 3D Models for Prostate Cancer Growth and Invasion in Laminin-rich Extracellular Matrix

GEO Series GSE19426. Homo sapiens. 54 samples. Type: Expression profiling by array.

openGEO-OpenDec 2010View details →
geo24/100

Cell-matrix interactions control biliary organoids polarity,architecture and differentiation and can be exploited to improve modelling of biliary diseases [scRNA-seq]

GEO Series GSE204959. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2023View details →
geo20/100

Matrix directs trophoblast differentiation in a bioprinted organoid model of early placental development

GEO Series GSE279994. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJul 2025View details →
geo20/100

Adapted Boolean Network Models for Extracellular Matrix Formation

GEO Series GSE13837. Homo sapiens. 60 samples. Type: Expression profiling by array.

openGEO-OpenJul 2009View details →
geo20/100

Suppression and Activation of the Malignant Phenotype by Extracellular Matrix in Xenograft Models of Bladder Cancer: A Model for Tumor Cell Dormancy

GEO Series GSE35947. Homo sapiens. 18 samples. Type: Expression profiling by array.

openGEO-OpenFeb 2014View details →
geo20/100

A novel 3-D organotypic culture model by co-culturing alpha-SMA positive CAF and cholangiocarcinoma cells in a collagen matrix

GEO Series GSE38889. Rattus norvegicus. 13 samples. Type: Expression profiling by array.

openGEO-OpenJun 2012View details →
geo20/100

Altered extracellular matrix structure and elevated stiffness in a brain organoid model for disease

GEO Series GSE228926. Homo sapiens. 31 samples. Type: Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing.

openGEO-OpenJan 2025View details →
geo20/100

Changes in Global Gene Expression Associated with 3D Structure of Tumors: an ex vivo Matrix-Free Mesothelioma Spheroid Model

GEO Series GSE37629. Homo sapiens. 6 samples. Type: Expression profiling by array.

openGEO-OpenJun 2012View details →
geo16/100

CSF1R inhibitor-mediated microglial depletion prevents reductions in striatal volume, extracellular matrix alterations, and perineuronal net loss in a mouse model of Huntington’s disease

GEO Series GSE136158. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2019View details →
geo16/100

Extracellular matrix glycation epigenetically regulates brain aging and neurodegeneration in the in vitro aged neurovascular model

GEO Series GSE278799. Homo sapiens. 7 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenOct 2025View details →
geo16/100

Potentially Dysregulated Cholesterol, Cellular Interaction, Immune, and Extracellular Matrix in NTCU-Induced Lung Squamous Cell Carcinoma (LUSC) in Mice Model and LUSC Patients

GEO Series GSE240837. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2024View details →
geo16/100

Dynamical modeling reveals RNA decay mediates the effect of matrix stiffness on aged muscle stem cell fate

GEO Series GSE225583. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2025View details →

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record