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2,620 results for “Molecular Phylogeny”
FIGURES 81 – 86 in Taxonomy and molecular phylogeny of the Platystictidae of Sri Lanka (Insecta: Odonata)
FIGURES 81 – 86. Ceylonosticta walli — (81) thorax and head, lateral view [male]; (82) prothorax, lateral view [male]; (83) anal appendages, dorsolateral view [male]; (84) anal appendages, ventrolateral view [male]; (85) thorax and head, lateral view [female]; (86) prothorax, lateral view [female]. [Material origin: male and female—Tunmodera, Colombo District, Sri Lanka]
FIGURES 34 – 38 in Taxonomy and molecular phylogeny of the Platystictidae of Sri Lanka (Insecta: Odonata)
FIGURES 34 – 38. Ceylonosticta adami — (34) thorax and head, lateral view [male]; (35) prothorax, lateral view [male]; (36) anal appendages, dorsal view [male]; (37) anal appendages, lateral view [male]; (38) anal appendages, ventral view [male]. [Material origin: male—Hunnas Falls, Kandy District, Sri Lanka]
FIGURE 174 in Taxonomy and molecular phylogeny of the Platystictidae of Sri Lanka (Insecta: Odonata)
FIGURE 174. Maximum likelihood best tree of the combined 16 S + 28 S + COI dataset from 46 Platystictidae taxa, represented by 62 specimens. Sri Lankan Platystictinae are represented by 21 species and 37 specimens. Bootstrap supports are shown if less than 100 %. For Sri Lankan taxa the individual species-groups are indicated by the dark grey bars. The bars on the right indicate the distribution of individual specimens, the bars of Sri Lankan and Indian specimens are highlighted with light grey. Specimen details are provided in Table 3 of Appendix 1.
FIGURES 138 – 143 in Taxonomy and molecular phylogeny of the Platystictidae of Sri Lanka (Insecta: Odonata)
FIGURES 138 – 143. Coloration in life: Ceylonosticta inferioreducta sp. nov. — (138) male, (139) female; Ceylonosticta mirifica sp. nov. — (140) male, (141) female; Ceylonosticta adami — (142) male; (143) female [photos: M. Bedjanič, fig. 138, photo: K. Conniff].
FIGURES 28 – 33 in Taxonomy and molecular phylogeny of the Platystictidae of Sri Lanka (Insecta: Odonata)
FIGURES 28 – 33. Ceylonosticta mirifica sp. nov. — (28) thorax and head, lateral view [male holotype]; (29) prothorax, lateral view [male holotype]; (30) anal appendages, dorsal view [male holotype]; (31) anal appendages, ventral view [male holotype]; (32) thorax and head, dorsolateral view [female, field photograph]; (33) wings [male holotype]. [Material origin: male holotype - Uwella; Ratnapura District, Sri Lanka]
FIGURES 87 – 92 in Taxonomy and molecular phylogeny of the Platystictidae of Sri Lanka (Insecta: Odonata)
FIGURES 87 – 92. Ceylonosticta montana — (87) thorax and head, lateral view [male]; (88) prothorax, lateral view [male]; (89) thorax and head, lateral view [female]; (90) prothorax, lateral view [female]; (91) anal appendages, dorsolateral view [male]; (92) anal appendages, ventral view [male]. [Material origin: male—Hakgala, Nuwara Eliya District, Sri Lanka; female— Haputale, Badulla District, Sri Lanka]
FIGURES 9 – 13 in Taxonomy and molecular phylogeny of the Platystictidae of Sri Lanka (Insecta: Odonata)
FIGURES 9 – 13. Ceylonosticta subtropica — (9) thorax and head, lateral view [male, lectotype]; (10) prothorax, lateral view [male, lectotype]; (11) anal appendages, dorsal view [male, lectotype]; (12) anal appendages, lateral view [male, lectotype]; (13) thorax, head and wings, dorsal view [male, lectotype]. [Material origin: male lectotype—Petiagalla, Ratnapura District, Sri Lanka]
FIGURES 5 – 8 in Taxonomy and molecular phylogeny of the Platystictidae of Sri Lanka (Insecta: Odonata)
FIGURES 5 – 8 [reproduced from Bedjanič, 2010]. Ceylonosticta mojca — (5) head and prothorax, lateral view [male holotype]; (6) anal appendages, ventral view [male holotype]; (7) abdomen with anal appendages, dorsal view [male holotype]; (8) abdomen with anal appendages, ventral view [male holotype]. [Material origin: male holotype—Deniyaya, Matara District, Sri Lanka]
FIGURES 104 – 109 in Taxonomy and molecular phylogeny of the Platystictidae of Sri Lanka (Insecta: Odonata)
FIGURES 104 – 109. Platysticta apicalis — (104) thorax and head, lateral view [male]; (105) prothorax, lateral view [male]; (106) thorax and head, lateral view [female]; (107) prothorax, lateral view [female]; (108) anal appendages, dorsolateral view [male]; (109) ovipositor, lateral view [female]. [Material origin: male—Laksapana, Kandy District, Sri Lanka; female— Kanneliya, Galle District, Sri Lanka]
FIGURE 4 in New molecular phylogeny of Lucinidae: increased taxon base with focus on tropical Western Atlantic species (Mollusca: Bivalvia)
FIGURE 4. Single gene tree for Lucinidae based on cyt b sequences, using Bayesian inference as implemented by MrBayes. Support values are posterior probabilities (PP); branches with PP <50 % were collapsed. Western Atlantic species in red. See Table 1 for sample details. Monitilorinae and Lucininae expanded in Fig. 5.
FIGURE 1 in New molecular phylogeny of Lucinidae: increased taxon base with focus on tropical Western Atlantic species (Mollusca: Bivalvia)
FIGURE 1. Combined gene tree for Lucinidae based on sequences from three genes (18 S rRNA, 28 S rRNA and cyt b), using Bayesian inference as implemented by MrBayes. Support values are posterior probabilities (PP). Codakiinae and Lucininae expanded in Figs 2 and 3. See Table 1 for sample details. Western Atlantic species in red. Scale is number of substitutions per site. Locality codes used on trees. ABD—Abu Dhabi; ANG—Angola; BD—Bermuda; BOC—Bocas, Panama; BR—Broome, Australia; CAL—California; CB – Chesterfield Bank; COSRIC West Costa Rica; CR—Croatia; DMP—Dampier, Australia; DEV—Devon, UK; FK—Florida Keys; FR—France; GD—Guadeloupe; HK—Hong Kong; JPN – Japan; KK—Kungkraben Bay, Thailand; LH—Lord Howe Island; LI – Lizard Island, Australia; MAD—Madagascar; MADANG—Madang, Papua New Guinea; MAUR – Mauritius; MB—Moreton Bay, Australia; MEX—West Mexico; NC—New Caledonia; NIG—Nigeria; OK— Okinawa; PAN – Panglao, Philippines; PNG – Papua New Guinea; ROD—Rodrigues; RUK—Ryukyus, Japan; SAF—Safaga, Red Sea; SGP—Singapore; SOL—Solomon Sea; SYD—Sydney, Australia; TCB—Tin Can Bay, Australia; TIM—East Timor; TJ—Tjärnö, Sweden; TUN—Djerba, Tunisia; VAN—Vanuatu; VEN—Venezuela; UK—England.
Figure 5 in A new genus of xenophyophores (Foraminifera) from Japan Trench: morphological description, molecular phylogeny and elemental analysis
Figure 5. Inductively coupled plasma mass spectrometry (ICPMS) values for the composition of the total fragment and different structural parts of Shinkaiya lindsayi gen. et sp. nov. (total fragment), and of the environmental sediment. The mass of elemental aluminium (Al), lead (Pb), magnesium (Mg), uranium (U), barium (Ba), strontium (Sr), and mercury (Hg), per gram of dry material, is shown. A semiquantitative method has been used for Pb, U, and Hg.
Figure 4 in A new genus of xenophyophores (Foraminifera) from Japan Trench: morphological description, molecular phylogeny and elemental analysis
Figure 4. Phylogenetic position of Shinkaiya lindsayi gen et sp. nov. among Foraminifera, based on complete small-subunit ribosomal DNA (SSU rDNA) gene sequences. The tree was obtained using the maximum-likelihood method with the general time-reversible (GTR + G + I) model, with four rates categories, and 1000 replicates for bootstrap analysis. Only bootstrap support values higher than 70% are indicated.
Figure 3 in A new genus of xenophyophores (Foraminifera) from Japan Trench: morphological description, molecular phylogeny and elemental analysis
Figure 3. Shinkaiya lindsayi gen. et sp. nov. A, scanning electron micrograph (SEM) of an open tube, showing its inner surface with many radiolarian tests, a granellare string (right-hand arrow), and a stercomare string (left-hand arrow). B, SEM image of an open stercomare string, containing stercomata (spherical pellets). C, SEM image of the organic sheath of the granellare. D, SEM image showing details of the external surface of the test, with agglutinated material. E, F, transmission electronic microscopy (TEM) images of a stercomare section, showing its wall (W), stercomata (S), and cytoplasm (C). Scale bars: 100 Mm (A), 10 Mm (B–D), 2 Mm (E), 1 Mm (F).
Figure 1 in A new genus of xenophyophores (Foraminifera) from Japan Trench: morphological description, molecular phylogeny and elemental analysis
Figure 1. Schematic representation of the small-subunit ribosomal DNA (SSU rDNA) sequence of Shinkaiya lindsayi gen. et sp. nov., showing the conserved regions, as well as the largest insertion and primers used for DNA amplifications.
Figure 2 in A new genus of xenophyophores (Foraminifera) from Japan Trench: morphological description, molecular phylogeny and elemental analysis
Figure 2. Shinkaiya lindsayi gen. et sp. nov. A, holotype specimen in its push core, just after collection (the authors assumed that this was a whole specimen, almost unbroken by the corer tube). B, holotype specimen out of its core. C, D, microscopic views of fragments, revealing the internal organization (G, granellare; S, stercomare). C, transversal view showing the dark stercomare strings. D, the fragment is open along a longitudinal axis, displaying the obvious whitish granellare and the stercomare. E, F, fragments of granellare stained with diaminidophenylindol (DAPI), revealing thousands of nuclei in the cytoplasm. Scale bars: 15 mm (A), 15 mm (B), 250 Mm (C), 500 Mm (D), 250 Mm (E), and 30 Mm (F).
Figures 7–12 in Taxonomy and molecular phylogeny of the Phortica hani species complex (Diptera: Drosophilidae)
Figures 7–12. Fifth sternites of male: 7, Phortica hani Zhang & Shi; 8, Phortica floccipes Cao & Chen sp. nov.; 9, Phortica hirtotibia Cao & Chen sp. nov.; 10, Phortica panda Cao & Chen sp. nov.; 11, Phortica longicauda Cao & Chen sp. nov.; 12, Phortica longiseta Cao & Chen sp. nov. The scale bars = 0.1 mm.
Figures 24, 25 in Taxonomy and molecular phylogeny of the Phortica hani species complex (Diptera: Drosophilidae)
Figures 24, 25. Phortica longiseta Cao & Chen sp. nov., male. 24, epandrium, surstylus, and cercus; 25, hypandrium, gonopods, paramere, aedeagus, and aedeagal apodeme. For abbreviations see Figs 14 and 15. Scale bars = 0.1 mm.
Figure 27 in Taxonomy and molecular phylogeny of the Phortica hani species complex (Diptera: Drosophilidae)
Figure 27. Single maximum parsimony tree based on the concatenated DNA sequences (tree length = 831, consistency index = 0.7714, retention index = 0.7497).
Figures 22, 23 in Taxonomy and molecular phylogeny of the Phortica hani species complex (Diptera: Drosophilidae)
Figures 22, 23. Phortica longicauda Cao & Chen sp. nov., male. 22, epandrium, surstylus, and cercus; 23, hypandrium, gonopods, paramere, aedeagus, and aedeagal apodeme. For abbreviations see Figs 14 and 15. Scale bars = 0.1 mm.
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