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FIGURE 2 in A review on the cytogenetics of the tribe Oryzomyini (Rodentia: Cricetidae: Sigmodontinae), with the description of new karyotypes

FIGURE 2. Distribution of diploid and fundamental number of karyotyped specimens of genus Cerradomys. (□) C. akroai; (■) C. goytaca; (ê) C. langguthi; (r) C. maracajuensis; (▲) C. marinhus; (○) C. scotti; (☆) C. subflavus; (l) C. vivoi.

opennotspecifiedNov 2020View details →
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FIGURE 20 in A review on the cytogenetics of the tribe Oryzomyini (Rodentia: Cricetidae: Sigmodontinae), with the description of new karyotypes

FIGURE 20. Karyotype of Scolomys sp., male with 2n = 62 and FN = 80. (A) Conventional staining (JAP 229); (B) C-banding (JAP 229); (C) G-banding (JAP 229); (D) Metaphase plate after fluorescent in situ hybridization with telomeric probe (left) and DAPI staining (right) (JAP 229).

opennotspecifiedNov 2020View details →
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FIGURE 15 in A review on the cytogenetics of the tribe Oryzomyini (Rodentia: Cricetidae: Sigmodontinae), with the description of new karyotypes

FIGURE 15. Karyotype of Oecomys sp. 2, female with 2n = 64 and FN = 92. (A) Conventional staining (JAP 150) (inset: sex chromosomes of a male (JAP 96)); (B) C-banding (JAP 150) (inset: sex chromosomes of a male (JAP 96)); (C) G-banding (JAP 150); (D) Metaphase plate after fluorescent in situ hybridization with telomeric probe (left) and DAPI staining (right) (JAP 150), arrows indicate the hybridization of interstitial telomeric sequence.

opennotspecifiedNov 2020View details →
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FIGURE 1 in A review on the cytogenetics of the tribe Oryzomyini (Rodentia: Cricetidae: Sigmodontinae), with the description of new karyotypes

FIGURE 1. Collection localities of Oryzomyini species analyzed in this work. (1) Claúdia, Mato Grosso state; (2) and (3) Rio Japurá, Amazonas state; (4) and (5) Rio Içá, Amazonas state.

opennotspecifiedNov 2020View details →
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FIGURE 23 in A review on the cytogenetics of the tribe Oryzomyini (Rodentia: Cricetidae: Sigmodontinae), with the description of new karyotypes

FIGURE 23. Distribution of diploid and fundamental number of karyotyped species of tribe Oryzomyini.

opennotspecifiedNov 2020View details →
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FIGURE 17 in A review on the cytogenetics of the tribe Oryzomyini (Rodentia: Cricetidae: Sigmodontinae), with the description of new karyotypes

FIGURE 17. Distribution of diploid and fundamental number of karyotyped specimens of genus Oligoryzomys. (r) O. mattogrossae; (■) O. microtis; (○) O. moojeni; (☆) O. rupestris; (▲) O. stramineus; (l) O. utiaritensis.

opennotspecifiedNov 2020View details →
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FIGURE 12 in Calling for a reassessment of rodent diversity in Colombia: description of a new species of Neacomys (Cricetidae: Oryzomyini) from the Magdalena Valley, with a new phylogenetic hypothesis for the genus and comments on its diversification

FIGURE 12. Illustration of Neacomys serranensis sp. nov. by wildlife artist and zoologist Velizar Simeonovski.

opennotspecifiedFeb 2021View details →
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FIGURE 10 in Calling for a reassessment of rodent diversity in Colombia: description of a new species of Neacomys (Cricetidae: Oryzomyini) from the Magdalena Valley, with a new phylogenetic hypothesis for the genus and comments on its diversification

FIGURE 10. Comparison of the lateral profiles of the skulls of Trans-Andean species of Neacomys present in Colombia: A) Neacomys sp. nov. (UIS-MHN-M 1068, holotype). B) Neacomys tenuipes (UIS-MHN-M 1723). Note a more convex profile of the braincase, a thicker hamular process of the squamosal, a broader condylar process, a larger and laterally projected mental foramen, and the anterior margin of nasals without a hump in Neacomys sp. nov. con: condylar process; hp: hamular process of the squamosal; mf: mental foramen; nas: nasals.

opennotspecifiedFeb 2021View details →
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FIGURE 8 in Calling for a reassessment of rodent diversity in Colombia: description of a new species of Neacomys (Cricetidae: Oryzomyini) from the Magdalena Valley, with a new phylogenetic hypothesis for the genus and comments on its diversification

FIGURE 8. Ventral perspectives of adult specimens illustrating the striking difference in ventral fur of the two Trans-Andean species of Neacomys present in Colombia: A) Holotype of Neacomys sp. nov (UIS-MHN-M 1068). B) Section of the holotype of Neacomys sp. nov. showing its characteristic gray-based ochraceous-buff ventral fur. C) Neacomys tenuipes (UIS-MHN-M 1723); note the contrasting entirely white ventral fur of this species.

opennotspecifiedFeb 2021View details →
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FIGURE 7 in Calling for a reassessment of rodent diversity in Colombia: description of a new species of Neacomys (Cricetidae: Oryzomyini) from the Magdalena Valley, with a new phylogenetic hypothesis for the genus and comments on its diversification

FIGURE 7. Frontal perspectives of adult specimens belonging to the two Trans-Andean species of Neacomys present in Colombia: A) Holotype of Neacomys sp. nov (UIS-MHN-M 1068); note the distinctive broad ochraceous-orange patches in the sides of the muzzle of this species. B) Neacomys tenuipes (UIS-MHN-M 1723).

opennotspecifiedFeb 2021View details →
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FIGURE 6 in Calling for a reassessment of rodent diversity in Colombia: description of a new species of Neacomys (Cricetidae: Oryzomyini) from the Magdalena Valley, with a new phylogenetic hypothesis for the genus and comments on its diversification

FIGURE 6. Dorsal perspectives of adult specimens belonging to the two Trans-Andean species of Neacomys present in Colombia: A) Holotype of Neacomys sp. nov (UIS-MHN-M 1068). B) Neacomys tenuipes (UIS-MHN-M 1723); note that a portion of the tail is missing in this specimen.

opennotspecifiedFeb 2021View details →
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FIGURE 5. A in Calling for a reassessment of rodent diversity in Colombia: description of a new species of Neacomys (Cricetidae: Oryzomyini) from the Magdalena Valley, with a new phylogenetic hypothesis for the genus and comments on its diversification

FIGURE 5. A) Montane forest habitat along the left Bank of the La San Guillerma stream, adjacent to the type locality of Neacomys sp. nov. (municipality of El Carmen de Chucurí) (Photograph by Juliette Gualdrón) B) View of the forest remnant where the second specimen of Neacomys sp nov. was collected (municipality of Hato) (Photograph by Juliette Gualdrón). C) Topography of the western slope of the Serranía de los Yariguíes from the campsite "Finca Buenos Aires"; near the type locality of Neacomys sp. nov. D) Educational activity with members of the community in the municipality of El Carmen del Chucurí, Vereda la Bodega, Sector Manchurrias, illustrating the importance of government funded projects (like Santander BIO expeditions), not only to inventory the biodiversity of remote areas, but also to teach local people to preserve it.

opennotspecifiedFeb 2021View details →
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FIGURE 4 in Calling for a reassessment of rodent diversity in Colombia: description of a new species of Neacomys (Cricetidae: Oryzomyini) from the Magdalena Valley, with a new phylogenetic hypothesis for the genus and comments on its diversification

FIGURE 4. Scatterplots of the Principal Components Analyses: PC1 and PC2 are represented in the graphics. A. PCA of the external and craniodental variables of all the small-bodied species of Neacomys; B. PCA of the craniodental variables of N. tenuipes and Neacomys sp. nov. Miniatures in the right side correspond to the Bayesian Cytb phylogeny recovered here (FIGURE 3): species in the scatterplots and the phylogenies are same colored.

opennotspecifiedFeb 2021View details →
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FIGURE 3 in Calling for a reassessment of rodent diversity in Colombia: description of a new species of Neacomys (Cricetidae: Oryzomyini) from the Magdalena Valley, with a new phylogenetic hypothesis for the genus and comments on its diversification

FIGURE 3. Bayesian Inference topology based on Cytb sequence data used to assess the position of Neacomys sp. nov. in relation to other species in the genus (BI and ML analyses resulted in congruent topologies). Support values are indicated for each node (Bayesian posterior probabilities to the left, and percentages of 1,000 bootstrap replicates to the right). Each terminal is identified by country of origin, the next largest political unit, and GenBank accession number (in red). For specimens of N. tenuipes and Neacomys sp. nov. sequenced here, collection numbers are provided, as well as a number referring to localities mapped in FIGURE 2 and listed in Appendix I. Shaded colored boxes enclose the species groups proposed by Hurtado & Pacheco (2017) and Semedo et al. (2020). Abbreviations: BO (Bolivia), BR (Brazil), CO (Colombia), EC (Ecuador), FG (French Guyana), GU (Guyana), PE (Peru), and SU (Suriname).

opennotspecifiedFeb 2021View details →
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FIGURE 11 in Calling for a reassessment of rodent diversity in Colombia: description of a new species of Neacomys (Cricetidae: Oryzomyini) from the Magdalena Valley, with a new phylogenetic hypothesis for the genus and comments on its diversification

FIGURE 11. Selected qualitative morphological traits differentiating Trans-Andean species of Neacomys present in Colombia: A), C), E) Neacomys sp. nov. B), D), F) N. tenuipes. Note the tegmen tympani exposed above the dorsal surface of the ectotympanic, the opened ectotympanic ring, the larger orbicular apophysis of the malleus, the bifurcated paraoccipital process, the deeper folds of the upper molars, and the divided mesoflexus of M1 in the new species. ab: auditory bullae; adeect: anterodorsal edge of the ectotympanic; hyp: hypoflexus; hp: hamular process of the squamosal; M1 prc: procingulum of first upper molar; mes: mesoflexus; met: metaflexus; mt: mastoid tubercle; oa: orbicular apophysis; par: paraflexus; pgf: postglenoid foramen; pp: paraoccipital process; pro: protoflexus; ssf: subsquamosal fenestra; tt: tegmen tympani.

opennotspecifiedFeb 2021View details →
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FIGURE 2 in Calling for a reassessment of rodent diversity in Colombia: description of a new species of Neacomys (Cricetidae: Oryzomyini) from the Magdalena Valley, with a new phylogenetic hypothesis for the genus and comments on its diversification

FIGURE 2. Map showing collection localities of the named and unamed small-bodied species of Neacomys (except N. pictus) along with salient topographic features of northern South America. Localities of N. tenuipes and Neacomys sp. nov are numbered according to Appendix I. Localities of the remaining species are detailed in Voss et al. (2001), Sánchez-Vendizú et al. (2018), and Semedo et al. (2020). Miniature in the right side of the map corresponds to the Bayesian Cytb phylogeny recovered here (FIGURE 3): species in the map and phylogeny are same colored; the numbers in some nodes correspond to the median divergence times estimated by Upham et al. (2019) within Neacomys.

opennotspecifiedFeb 2021View details →
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FIGURE 1 in Calling for a reassessment of rodent diversity in Colombia: description of a new species of Neacomys (Cricetidae: Oryzomyini) from the Magdalena Valley, with a new phylogenetic hypothesis for the genus and comments on its diversification

FIGURE 1. Map of collecting localities of the specimens of Neacomys sp. nov. (stars) 1. Colombia, Department of Santander, Municipality of El Carmen de Chucurí, vereda La Bodega, sector Manchurrias, western slope of the Serranía de los Yariguíes, Finca Buenos Aires, in the basin of the La San Guillerma stream (Type locality); 2. Colombia, Department of Santander, Municipality of Hato, vereda Hoya Negra. Numbers also correspond to the localities listed in Appendix I. Dashed lines represent boundaries of the municipalities encompassing the two localities. Green polygon represents the area comprised by the Serranía de los Yariguíes National Natural Park.

opennotspecifiedFeb 2021View details →
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FIGURE 9 in Calling for a reassessment of rodent diversity in Colombia: description of a new species of Neacomys (Cricetidae: Oryzomyini) from the Magdalena Valley, with a new phylogenetic hypothesis for the genus and comments on its diversification

FIGURE 9. Comparison of the dorsal and ventral views of the skulls of Trans-Andean species of Neacomys present in Colombia: A), C) Neacomys sp. nov. (UIS-MHN-M 1068, holotype). B), D) Neacomys tenuipes (UIS-MHN-M 1723). Note the nasals more expanded anteriorly, the shallower zygomatic notches, the less developed supraorbital ridges, the procingulum of M1 flattened laterally, and the incisive foramina extending almost to anterior alveolus of M1 in Neacomys sp. nov. if: incisive foramen; M1 prc: procingulum of first upper molar; nas: nasal bone; sob: supraorbital beads; zn: zygomatic notch.

opennotspecifiedFeb 2021View details →
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Figure 10 in Taxonomy, phylogeny, and diversity of the extinct Lesser Antillean rice rats (Sigmodontinae: Oryzomyini), with description of a new genus and species

Figure 10. Maxillary and mandibular tooth rows and cranial elements of Pennatomys nivalis gen. et sp. nov. A–C, maxillary tooth rows. A, FLMNH-EAP 05270001 (St. Eustatius). B, NHM M 82456 (Nevis) (reversed for comparison). C, FLMNH-EAP 05270002 (St. Eustatius). D–G, mandibular tooth rows. D, NHM M 82452 (holotype: Nevis). E, NHM M 82460 (Nevis). F, FLMNH-EAP 05270003 (St. Eustatius) (reversed for comparison). G, FLMNH-EAP 05270004 (St. Eustatius) (reversed for comparison). H–I, maxilla, FLMNH-EAP 05270002 (St. Eustatius). J, mandible, labial view, FLMNH-EAP 05270003 (St. Eustatius). K, paired frontals, FLMNH-EAP 05270005 (St. Eustatius). Scale bars: 1 mm.

opennotspecifiedNov 2010View details →
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Figure 11 in Taxonomy, phylogeny, and diversity of the extinct Lesser Antillean rice rats (Sigmodontinae: Oryzomyini), with description of a new genus and species

Figure 11. Phylogenetic relationships of West Indian oryzomyines. Consensus cladogram of four most-parsimonious trees (tree length, L = 1245; consistency index, CI = 0.37; retention index, RI = 0.64) of combined molecular (Irbp) and morphological characters. Jackknife (> 50%) and Bremer (> 1) nodal support indices are shown above and below branches, respectively. Clades A, B, C, and D are the same as those recovered by Weksler (2006). Out-groups include Peromyscus maniculatus (Neotominae), Nyctomys sumichrasti (Tylomyinae), and Delomys sublineatus, Thomasomys baeops, and Wiedomys pyrrhorhinos (Sigmodontinae). Oryzomyine generic taxonomy follows that of Weksler et al. (2006).

opennotspecifiedNov 2010View details →

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