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174
datasets available to search
ShareScore release 0.9.0
Dataset results
174 results for “Single-cell omics”
Single-cell multi-omic profiling of chromatin conformation and DNA methylome
GEO Series GSE124391. Homo sapiens; Mus musculus. 622 samples. Type: Methylation profiling by high throughput sequencing; Other.
Cellular states, clonal dynamics, and evolution in Pearson syndrome revealed via single-cell multi-omics [PBMC_scATAC]
GEO Series GSE173931. Homo sapiens. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-cell multi-omic analysis of the vestibular schwannoma ecosystem uncovers a nerve injury-like state [bulk RNA-seq]
GEO Series GSE216781. Homo sapiens. 22 samples. Type: Expression profiling by high throughput sequencing.
Cellular states, clonal dynamics, and evolution in Pearson syndrome revealed via single-cell multi-omics [DOGMAseq_PT1]
GEO Series GSE217450. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Multi-omics characterization of human Embryonic Stem Cells-derived Pharyngeal Endoderm cells (Single-cell RNA-Seq)
GEO Series GSE208317. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Deciphering cell states and genealogies of human hematopoiesis with single-cell multi-omics [Young2]
GEO Series GSE219248. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Single-cell multi-omic analysis of the vestibular schwannoma ecosystem uncovers a nerve injury-like state [scRNA-seq]
GEO Series GSE216783. Homo sapiens. 15 samples. Type: Expression profiling by high throughput sequencing.
Peanut Allergy Oral Immunotherapy Drives Single-Cell Multi-omic Changes in Peanut-reactive T cells Associated with Sustained Unresponsiveness
GEO Series GSE288452. Homo sapiens. 22 samples. Type: Expression profiling by high throughput sequencing; Other.
Single-cell multi-omics profiling links dynamic DNA methylation to cell fate decisions during early mammalian organogenesis [scNMT BS-seq]
GEO Series GSE204904. Mus musculus. 767 samples. Type: Methylation profiling by high throughput sequencing.
Single-cell multi-omics analyses in the DILfrequency clinical trail samples
GEO Series GSE201197. Homo sapiens. 26 samples. Type: Expression profiling by high throughput sequencing.
Single-cell and spatial omics reveal progressive loss of xylem developmental complexity across seed plants
GEO Series GSE253891. Cunninghamia lanceolata. 3 samples. Type: Expression profiling by high throughput sequencing.
A multi-omic single-cell atlas of human gynecological malignancies
GEO Series GSE173682. Homo sapiens. 22 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single-cell time-resolved multi-omics reveal apoptotic and ferroptotic heterogeneity during foam cell formation
GEO Series GSE240820. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
Single-cell multi-omics sequencing revealed cytoskeleton defects led to human embryonic arrest characterized with zygotic genome activation
GEO Series GSE247678. Homo sapiens. 111 samples. Type: Methylation profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Single-cell Multi-omics Defines Tolerogenic Extrathymic Aire-Expressing Populations with Unique Homology to Thymic Epithelium
GEO Series GSE176282. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single-cell and spatial multi-omics highlight effects of anti-integrin therapy across cellular compartments in ulcerative colitis [biopsy CITE-seq]
GEO Series GSE250490. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing; Other.
Single-Cell Omics Analysis of Human Basophils Reveals Two Transcriptionally Distinct Populations
GEO Series GSE287976. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing; Other.
Deciphering cell states and genealogies of human hematopoiesis with single-cell multi-omics [Aged 2]
GEO Series GSE219057. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Single-cell multi-omics profiling links dynamic DNA methylation to cell fate decisions during early mammalian organogenesis.
GEO Series GSE204908. Mus musculus. 2617 samples. Type: Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.
Single-cell omics analysis reveals functional diversification of hepatocytes during liver regeneration [scATAC-Seq]
GEO Series GSE158873. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.