Skip to main content
Powered by ShareScore

Find research datasets worth reusing

Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.

156

datasets available to search

ShareScore release 0.7.1

Reset

Dataset results

156 results for “Trematoda”

Learn how ShareScore rates datasets ↗
zenodo40/100

Fig. 1 in Acute mortality in California tiger salamander (Ambystoma californiense) and Santa Cruz long-toed salamander (Ambystoma macrodactylum croceum) caused by Ribeiroia ondatrae (Class: Trematoda)

Fig. 1. Gross photographs of ethanol-fixed salamanders in late-stage metamorphosis from a mortality event in the Ellicott Slough National Wildlife Refuge (ESNWR) in Santa Cruz County, California, U.S.A. showing integumentary lesions. (A) California tiger salamander (Ambystoma californiense) exhibiting an extensive roughening of the skin with multifocal ulceration around the eyes, gular fold, and dorsal tail (arrows). (B) Santa Cruz long-toed salamander (Ambystoma macrodactylum croceum) with ulceration and crust formation on the gular fold and base of the tail (arrow).

opencc-by-4.0Dec 2021View details →
zenodo40/100

Fig. 10 in New molecular data help clarify the taxonomy of Central European avian Dicrocoeliidae Looss, 1899 (Trematoda: Plagiorchiida)

Fig. 10. Representative photographs of slides with Lyperosomum turdia. Host species, sampling dates and host identification numbers are indicated. All specimens originated from the Czech Republic.

opencc-by-4.0Dec 2023View details →
zenodo40/100

Fig. 5 in New molecular data help clarify the taxonomy of Central European avian Dicrocoeliidae Looss, 1899 (Trematoda: Plagiorchiida)

Fig. 5. Representative photographs of slides with Brachydistomum olssoni, Brachydistomum salebrosum, and Brachydistomum ventricosum. Host species, sampling dates and host identification numbers are indicated. All specimens originated from the Czech Republic.

opencc-by-4.0Dec 2023View details →
zenodo40/100

Fig. 4 in New molecular data help clarify the taxonomy of Central European avian Dicrocoeliidae Looss, 1899 (Trematoda: Plagiorchiida)

Fig. 4. Maximum likelihood analysis of sequences of the ITS2 DNA locus of Dicrocoeliidae. Bootstrap values (n = 1000) are indicated for nodal support. Black circles indicate new sequences. The scale-bar indicates the number of substitutions per nucleotide site.

opencc-by-4.0Dec 2023View details →
zenodo40/100

Fig. 1 in New molecular data help clarify the taxonomy of Central European avian Dicrocoeliidae Looss, 1899 (Trematoda: Plagiorchiida)

Fig. 1. Maximum likelihood analysis of sequences of the CO1 DNA locus of Dicrocoeliidae. Bootstrap values (n = 1000) are indicated for nodal support. Black circles indicate new sequences. The scale-bar indicates the number of substitutions per nucleotide site.

opencc-by-4.0Dec 2023View details →
zenodo40/100

Fig. 3 in New molecular data help clarify the taxonomy of Central European avian Dicrocoeliidae Looss, 1899 (Trematoda: Plagiorchiida)

Fig. 3. Maximum likelihood analysis of sequences of nuclear DNA loci (28S rDNA (A) and 18S rDNA (B)) of Dicrocoeliidae. Bootstrap values (n = 1000) are indicated for nodal support. Black circles indicate new sequences. The scale-bars indicate the number of substitutions per nucleotide site.

opencc-by-4.0Dec 2023View details →
zenodo40/100

Fig. 2 in New molecular data help clarify the taxonomy of Central European avian Dicrocoeliidae Looss, 1899 (Trematoda: Plagiorchiida)

Fig. 2. Maximum likelihood analysis of sequences of the ND1 DNA locus of Dicrocoeliidae. Bootstrap values (n = 1000) are indicated for nodal support. Black circles indicate new sequences. The scale-bar indicates the number of substitutions per nucleotide site.

opencc-by-4.0Dec 2023View details →
zenodo40/100

Fig. 9 in New molecular data help clarify the taxonomy of Central European avian Dicrocoeliidae Looss, 1899 (Trematoda: Plagiorchiida)

Fig. 9. Representative photographs of slides with Lyperosomum petiolatum. Host species, sampling dates and host identification numbers are indicated. All specimens originated from the Czech Republic.

opencc-by-4.0Dec 2023View details →
zenodo40/100

Fig. 7 in New molecular data help clarify the taxonomy of Central European avian Dicrocoeliidae Looss, 1899 (Trematoda: Plagiorchiida)

Fig. 7. Representative photographs of slides with Lyperosomum tenori sp. n. (upper part of the figure) and Lyperosomum hirundinis sp. n. (lower part of the figure). Host species, sampling dates and host identification numbers are indicated. All specimens originated from the Czech Republic. Photographs of L. hirundinis sp. n. are composite photographs merged from multiple images. Note that the seeming differences in forebody shape of L. tenori sp. n. individuals is caused by differences in handling with host birds prior the fixation of the trematodes - L. tenori sp. n. from hosts that were frozen prior the examination are highly susceptible to forebody prolongation.

opencc-by-4.0Dec 2023View details →
zenodo40/100

Fig. 11 in New molecular data help clarify the taxonomy of Central European avian Dicrocoeliidae Looss, 1899 (Trematoda: Plagiorchiida)

Fig. 11. Representative photographs of slides with Stromitrema acrocephali sp. n. and Lutztrema atricapillae. Host species, sampling dates and host identification numbers are indicated. All specimens originated from the Czech Republic.

opencc-by-4.0Dec 2023View details →
zenodo40/100

Fig. 6 in New molecular data help clarify the taxonomy of Central European avian Dicrocoeliidae Looss, 1899 (Trematoda: Plagiorchiida)

Fig. 6. Drawings of holotype specimens of Lyperosomum tenori sp. n. (A), Lyperosomum atricapillae sp. n. (B), Stromitrema acrocephali sp. n. (C), Lutztrema atricapillae sp. n. (D), and Lyperosomum hirundinis sp. n. (E–F).

opencc-by-4.0Dec 2023View details →
zenodo40/100

Fig. 8 in New molecular data help clarify the taxonomy of Central European avian Dicrocoeliidae Looss, 1899 (Trematoda: Plagiorchiida)

Fig. 8. Representative photographs of slides with Lyperosomum atricapillae sp. n. Host species, sampling dates and host identification numbers are indicated. All specimens originated from the Czech Republic.

opencc-by-4.0Dec 2023View details →
zenodo40/100

Fig. 5 in Death by massive air sac fluke (Trematoda: Bothriogaster variolaris) infection in a free-ranging snail kite (Rostrhamus sociabilis)

Fig. 5. Bayesian inference phylogenetic tree of the Echinostomatoidea superfamily showing the position of trematodes extracted from Snail Kite from Ecuador (in bold). The tree was built using small subunit of the ribosomal RNA gene (18 S rDNA) in Beast v1.10.4. Bayesian posterior probability values ≥ 0.5 are shown in branches. Family, genus, and species from each sequence are listed along with their accession number. Family delimitations are indicated with grey boxes. Sequences of Schinostomatoidea and Opisthorchioidea were used as outgroups. Scale bar indicates number of expected substitutions per site.

opencc-by-4.0Dec 2022View details →
zenodo40/100

Fig. 4 in Death by massive air sac fluke (Trematoda: Bothriogaster variolaris) infection in a free-ranging snail kite (Rostrhamus sociabilis)

Fig. 4. Trematodes in the right abdominal air sac, serosa of gastrointestinal tract and celomic cavity of a Snail Kite (Rostrhamus sociabilis).

opencc-by-4.0Dec 2022View details →
zenodo40/100

Fig. 2 in Death by massive air sac fluke (Trematoda: Bothriogaster variolaris) infection in a free-ranging snail kite (Rostrhamus sociabilis)

Fig. 2. Trematodes in respiratory system and pneumatic bone of a Snail Kite (Rostrhamus sociabilis): A. Macroscopic image of the lungs, with presence of trematodes (arrows) found during necropsy. B. Trematodes (arrows) colonising the lumen of a tertiary bronchus (10x H&E) C. Trematodes (arrows) in an abdominal air sac (10x H&E) D. A parasite (arrow) in the coracoid bone (10x H&E).

opencc-by-4.0Dec 2022View details →
zenodo40/100

Fig. 1 in Death by massive air sac fluke (Trematoda: Bothriogaster variolaris) infection in a free-ranging snail kite (Rostrhamus sociabilis)

Fig. 1. Trematodes in serosa of heart and proventriculus of Snail Kite (Rostrhamus sociabilis): A. Close up image of a trematode (arrow) in the pericardium during necropsy. B. Histologic capture of a trematode (arrow) present in the serosa of the proventriculus (H&E).

opencc-by-4.0Dec 2022View details →
zenodo40/100

Fig. 3 in Death by massive air sac fluke (Trematoda: Bothriogaster variolaris) infection in a free-ranging snail kite (Rostrhamus sociabilis)

Fig. 3. Trematodes in the liver of a Snail Kite (Rostrhamus sociabilis): A. Trematodes (arrows) in the serosa of proventriculus, gizzard and liver found during postmortem procedure. B. Miracidium (arrow) in the liver parenchyma (40x H&E).

opencc-by-4.0Dec 2022View details →
zenodo40/100

Fig. 6 in Death by massive air sac fluke (Trematoda: Bothriogaster variolaris) infection in a free-ranging snail kite (Rostrhamus sociabilis)

Fig. 6. Full body (A), anterior end (B) and posterior end (C) of trematode Bothrigaster variolaris from a Snail Kite (Rostrhamus sociabilis). T = midbody testes, V = ventral sucker, p = pharynx, O = postesticular ovary, E = eggs.

opencc-by-4.0Dec 2022View details →
zenodo40/100

Fig. 1 in Size does not matter: molecular phylogeny reveals one of the largest trematodes from vertebrates, the enigmatic Ithyoclinostomum dimorphum, as a species of Clinostomum (Trematoda: Clinostomidae)

Fig. 1. Metacercariae of Clinostomum dimorphum found in the erythrinid fish, Hoplias intermedius from Brazil: (A) Whole view of a paragenophore specimen. B) Detail of reproductive structures of a hologenophore specimen.

opencc-by-4.0Dec 2022View details →
zenodo40/100

Fig. 2 in Size does not matter: molecular phylogeny reveals one of the largest trematodes from vertebrates, the enigmatic Ithyoclinostomum dimorphum, as a species of Clinostomum (Trematoda: Clinostomidae)

Fig. 2. Maximum likelihood phylogram based on the concatenated ITS1-5.8S-ITS2 + 28S + cox1 datasets of Clinostomum dimorphum (in bold) and selected species of the family Clinostomidae. Clade formed by isolates of 'Ithyoclinostomum' yamagutii (incertae sedis) is highlighted in grey. Taxon names are followed by GenBank accession numbers of ITS, 28S, and cox1, respectively, and country of record. Branch length scale bar indicates number of substitutions per site. Abbreviations: HON, Honduras; ITA, Italy; KEN, Kenya; MEX, Mexico; THAI, Thailand; USA, United States of America.

opencc-by-4.0Dec 2022View details →

ScienceDex guides

Understand access before you commit

These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

Compare curated datasets

Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record