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РИС. 1. Схематичное иЗображение глаЗа наЗемного лёгочного моллюска. СокраЩениЯ: c – роговица; ec – глаЗнаЯ капсула; r – сетчатка; p – краЯ Зрачка; l – хрусталик, окруженный слоем стекловидного тела; L abs – абсолютное расстоЯние между Зрачком и наружной поверхностью хрусталика; D l – продольный диаметр хрусталика; А – абсолютный диаметр Зрачabs ка; D – поперечный диаметр глаЗа. FIG. 1. Schematic drawing of the eye of a terrestrial pulmonate mollusk. Abbreviation: c – cornea; ec – eye capsule; r – retina; p – edges of the pupil; l – lens, surrounded by a layer of the vitreous body; L abs – the absolute distance between the pupil and the outer surface of the lens; D l – the longitudinal diameter of the lens; А abs – the absolute diameter of the pupil; D e – the transverse diameter of the eye. in Зрачок камерных глаЗ наЗемных брюхоногих моллюсков (Heterobranchia, Stylommatophora)
РИС. 1. Схематичное иЗображение глаЗа наЗемного лёгочного моллюска. СокраЩениЯ: c – роговица; ec – глаЗнаЯ капсула; r – сетчатка; p – краЯ Зрачка; l – хрусталик, окруженный слоем стекловидного тела; L abs – абсолютное расстоЯние между Зрачком и наружной поверхностью хрусталика; D l – продольный диаметр хрусталика; А – абсолютный диаметр Зрачabs ка; D – поперечный диаметр глаЗа. FIG. 1. Schematic drawing of the eye of a terrestrial pulmonate mollusk. Abbreviation: c – cornea; ec – eye capsule; r – retina; p – edges of the pupil; l – lens, surrounded by a layer of the vitreous body; L abs – the absolute distance between the pupil and the outer surface of the lens; D l – the longitudinal diameter of the lens; А abs – the absolute diameter of the pupil; D e – the transverse diameter of the eye.
Fig. 63. Olindias tenuis, BFLA4232, bell diameter 23 in Hydromedusae observed during night dives in the Gulf Stream
Fig. 63. Olindias tenuis, BFLA4232, bell diameter 23 mm. (A) Oblique aboral view of whole animal. (B) Lateral view of radial canal with gonad diverticula. (C) Bell margin with primary tentacles (yellow arrow) and secondary tentacles (red arrow), green arrows point to statocysts. Note the absence of tentacle bulbs, but numerous bulbs without tentacles (blue arrow).
Fig. 57. Solmundella bitentaculata, sample BFLA4119, bell diameter 4 in Hydromedusae observed during night dives in the Gulf Stream
Fig. 57. Solmundella bitentaculata, sample BFLA4119, bell diameter 4 mm. (A-B) Lateral views of whole animal, note the green mouth region. (C) Aboral view.
Fig. 50. Cunina octonaria, diameter 7 in Hydromedusae observed during night dives in the Gulf Stream
Fig. 50. Cunina octonaria, diameter 7 mm. (A) Aboral view of whole animal, with a crustacean on exumbrella. (B) Lateral view. (C) Close up of bell margin, note otoporpae and root of tentacle in middle, the velum is hanging downwards. (D) Oblique view from oral side. The bright spots below the otoporpae are the statocysts.
Fig. 47. Gastroblasta timida, diameter 6 in Hydromedusae observed during night dives in the Gulf Stream
Fig. 47. Gastroblasta timida, diameter 6 mm, with crustaceans in subumbrella. (A) Whole animal. (B) Lateral view of contracted animal. (C) Close up of region with stomachs in lateral view.
Text-fig. 13. Macrophotographs of the fossil stems from Mhengere. a: large (90 cm diameter) palm tree trunk in situ; b: external view of the outer roots at the base of the trunk; average diameter of single root is 7 mm; c, d: cross-sections of a fragment of trunk showing the random distribution of equal-sized fibre vascular bundles throughout the trunk, the so-called Coccos-type. in Stratigraphy, Chronology And Palaeontology Of The Tertiary Rocks Of The Cheringoma Plateau, Mozambique
Text-fig. 13. Macrophotographs of the fossil stems from Mhengere. a: large (90 cm diameter) palm tree trunk in situ; b: external view of the outer roots at the base of the trunk; average diameter of single root is 7 mm; c, d: cross-sections of a fragment of trunk showing the random distribution of equal-sized fibre vascular bundles throughout the trunk, the so-called Coccos-type.
Text-fig. 7. Exbeckettia mastixioides (E.REID et M.CHANDLER) comb. nov. Details of anatomy in transverse section on cut surfaces from bilocular fruit shown in Text-fig. 6i, V. 23013(3). a: Details of seed (S), locule (L), distinct endocarp planes of separation (arrows). b: Detail of endocarp adjacent to the locule, and surrounding mesocarp. Blue lines indicate thickness of sclerenchyma lining the locule. Note layer of horizontally oriented periclinal fibres a few cells thick, lining the locule (arrow). c: Enlargement showing parenchyma cells of the mesocarp decreasing in diameter toward the periphery. d: Enlargement showing fibres and sclereids of the endocarp. e: Sharp contact between endocarp and mesocarp. f, g: Detailed anatomy of endocarp including locule lining, and contact with mesocarp. Scale bars 2 mm in (a), (b), 1 mm in (c–g). in Mastixioid Fruits (Cornales) From The Early Eocene London Clay Flora: Morphology, Anatomy And Nomenclatural Revision
Text-fig. 7. Exbeckettia mastixioides (E.REID et M.CHANDLER) comb. nov. Details of anatomy in transverse section on cut surfaces from bilocular fruit shown in Text-fig. 6i, V. 23013(3). a: Details of seed (S), locule (L), distinct endocarp planes of separation (arrows). b: Detail of endocarp adjacent to the locule, and surrounding mesocarp. Blue lines indicate thickness of sclerenchyma lining the locule. Note layer of horizontally oriented periclinal fibres a few cells thick, lining the locule (arrow). c: Enlargement showing parenchyma cells of the mesocarp decreasing in diameter toward the periphery. d: Enlargement showing fibres and sclereids of the endocarp. e: Sharp contact between endocarp and mesocarp. f, g: Detailed anatomy of endocarp including locule lining, and contact with mesocarp. Scale bars 2 mm in (a), (b), 1 mm in (c–g).
Text-fig. 6. Transmitted light microphotographs of permineralized wood from Govone. a, b: cf. Cupressinoxylon sp., radial section, MGPT-PU141105, a – nodular end of ray parenchyma (arrow), b – thick and pitted horizontal walls of ray parenchyma (arrow). c–f: Pinaceae gen. et sp. indet., MGPT-PU141107, c – abnormal discoloration due to ecological disruptions (radial section), d – rays up to 10 cells high, uniseriate, partly biseriate (black arrow), intercellular spaces observed (white arrows) (tangential section), e – large, thick-walled axial resin canal with more than 9 epithelial cells observed, axial resin canal diameter>60 Μm (transverse section), f – spiral thickenings due to compression (white arrow) (radial section). in Remains Of A Subtropical Humid Forest In A Messinian Evaporitebearing Succession At Govone, Northwestern Italy - Preliminary Results
Text-fig. 6. Transmitted light microphotographs of permineralized wood from Govone. a, b: cf. Cupressinoxylon sp., radial section, MGPT-PU141105, a – nodular end of ray parenchyma (arrow), b – thick and pitted horizontal walls of ray parenchyma (arrow). c–f: Pinaceae gen. et sp. indet., MGPT-PU141107, c – abnormal discoloration due to ecological disruptions (radial section), d – rays up to 10 cells high, uniseriate, partly biseriate (black arrow), intercellular spaces observed (white arrows) (tangential section), e – large, thick-walled axial resin canal with more than 9 epithelial cells observed, axial resin canal diameter>60 Μm (transverse section), f – spiral thickenings due to compression (white arrow) (radial section).
Supporting data sets for "Estimating Carbon Fixation of Plant Organs for Afforestation Monitoring using a Process-based Ecosystem Model and Ecophysiological Parameter Optimization". (the survey of tree breast diameter and tree height in 11-year old Eucommia ulmoides plantation, values of simulation results used in figures and tables.)
<p>Supporting data sets for Miyauchi et al., Ecology and Evolution, 2019 (accepted).</p> <p>The files store: </p> <p>(1) The survey of tree breast diameter and tree height in <em>Eucommia ulmoides</em> plantation<em>.</em> The ring and stem analysis and dry weight of seven harvested sample trees in the plantation.</p> <p>(2) Values of optimization result used fig.7.</p> <p>(3) Values of prediction result used fig.8. and table 4.</p> <p>(4) Values of optimized parameters by optimization methods, parameter range and constrain.</p>
Cross section shape: circular elliptical unknown Siphuncle position: central marginal unknown Fig. 4 Morphometrics of orthoconic cephalopods from the Besano Formation. Measurements are compared with discrete characters of the shell. Orange circles represent definite and orange crosses likely orthoceratoids, while blue triangles represent definite and blue crosses likely coleoids. Black crosses are indeterminable. A Apical angle, calculated from length and diameters of the specimens. B Maximum diameter in Orthoceratoid and coleoid cephalopods from the Middle Triassic of Switzerland with an updated taxonomic framework for Triassic Orthoceratoidea
Cross section shape: circular elliptical unknown Siphuncle position: central marginal unknown Fig. 4 Morphometrics of orthoconic cephalopods from the Besano Formation. Measurements are compared with discrete characters of the shell. Orange circles represent definite and orange crosses likely orthoceratoids, while blue triangles represent definite and blue crosses likely coleoids. Black crosses are indeterminable. A Apical angle, calculated from length and diameters of the specimens. B Maximum diameter
Рис. 7–9. Coelorinchus idiolepis sp. nov. (7 — гоΛотип, 8 — паратип) и C. anisacanthus, гоΛотип, 81,5 мм HL (9), гоΛова, виΔ сбоку. Обозначения: oo — Δиаметр гΛаза, po — посторбитаΛьная ΔΛина. Масштаб: 7 — 20 мм; 8, 9 — 10 мм Figs. 7–9. Coelorinchus idiolepis sp. nov. (7 — holotype, 8 — paratype) and C. anisacanthus, holotype, 81.5 mm HL (9), head, lateral view. Symbols: oo — diameter of eye, po — postorbital length. Scale bars: 7 — 20 mm; 8, 9 — 10 mm in Coelorinchus From The Hawaiian-Emperor Seamount Chain (The Pacific Ocean) (Teleostei, Gadiformes, Macrouridae)
Рис. 7–9. Coelorinchus idiolepis sp. nov. (7 — гоΛотип, 8 — паратип) и C. anisacanthus, гоΛотип, 81,5 мм HL (9), гоΛова, виΔ сбоку. Обозначения: oo — Δиаметр гΛаза, po — посторбитаΛьная ΔΛина. Масштаб: 7 — 20 мм; 8, 9 — 10 мм Figs. 7–9. Coelorinchus idiolepis sp. nov. (7 — holotype, 8 — paratype) and C. anisacanthus, holotype, 81.5 mm HL (9), head, lateral view. Symbols: oo — diameter of eye, po — postorbital length. Scale bars: 7 — 20 mm; 8, 9 — 10 mm
Characterization and Simulation Data of Cylindrical, Elliptical, Parabolic, Conical and Root-like Tips with Diameters in Sandy Loam Soil
<p>Plants use many strategies to move efficiently in soil, such as growth from the tip, tropic movements, and morphological changes. In this paper, we propose a method to translate morphological features of <em>Zea mays</em> roots into a new design of soft robots that will be able to move in soil. The method relies on image processing and curve fitting techniques to extract the profile of <em>Z</em>. <em>mays</em> primary root. We implemented an analytic translation of the root profile in a 3D model (CAD) to fabricate root-like probes by means of 3D printing technology. Then, we carried out a comparative analysis among the artificial root-like probe and probes with different tip shapes (cylindrical, conical, elliptical, and parabolic) and diameters (11, 9, 7, 5, and 3 mm). The results showed that the energy consumption and the penetration force of the bioinspired probe are better with respect to the other shapes for all the diameters of the developed probes. For 100 mm of penetration depth and 7 mm of probe diameter, the energy consumption of the bioinspired probe is 89% lesser with respect to the cylindrical probe and 26% lesser with respect to the conical probe. The penetration performance of the considered tip shapes was evaluated also by means of numerical simulations, obtaining a good agreement with the experimental results. Additional investigations on plant root morphology, movement strategies, and material properties can allow the development of innovative bioinspired solutions exploitable in challenging environments. This research can bring to breakthrough scenarios in different fields, such as exploration tasks, environmental monitoring, geotechnical studies, and medical applications</p>
Calibration of test diameter and area as proxies for body size in the planktonic foraminifera Globoconella puncticulata
<p>Here we provide an extensive image library of<em> Globoconella puncticulata</em>, with accompanying 2D and 3D coordinate data and morphometric measurements. This data was generated using high-throughput imaging methods (<em>AutoMorph</em>) developed in P.M. Hull's lab at Yale University. This dataset accompanies the manuscript: Brombacher, J.A., Elder, L.E., Hull, P.M., Wilson, P.A. and Ezard, T.H.(In Press) Calibration of test diameter and area as proxies for body size in the planktonic foraminifera <em>Globoconella puncticulata.</em> <em>Journal of Foraminiferal Research</em>. The manuscript describes important details related to data collection and usage and should be consulted before using the data provided here. </p> <p>Samples were obtained from three sites in the Atlantic Ocean: equatorial Ocean Drilling Program (ODP) Site 925, subtropical ODP Site 659, and mid-latitude Integrated Ocean Drilling Program (IODP) Site U1313. 1233 individual foraminifera of the species <em>Globoconella puncticulata</em> were picked from these samples to be imaged. Nine slides of microfossils were imaged at multiple focal heights (z-planes; 31.1um step distance) using a light microscope with an automated stage and processed with the image processing models of <em>AutoMorph</em>. <em>AutoMorph</em> software and tutorials can be accessed here: https://github.com/HullLab. For an example of a raw slide scan see: Hsiang, Allison Y., Nelson, Kaylea, Elder, Leanne E., Liu, Yusu, & Hull, Pincelli M. (2016). Slide scan example for Automorph. Zenodo. http://doi.org/10.5281/zenodo.167557. Slides were named with the IODP or ODP site number. Each slide was imaged with the foraminifera arranged in 2-3 orientations (i.e., umbilical, spiral, and/or edge).</p> <p>One of the nine slide was imaged with both light and computed tomography in order to compare the volumetric data obtained from the two approaches. This slide had 6 individual foraminifera. All individuals imaged with this combination of approaches have ‘CTscan’ included in the file name. This <em>AutoMorph</em>/CT scanned slide was imaged from three orientations (umbilical, spiral, and edge) and with two z-step distances (distance between imaged focal planes on the z-axis) of 11.2 um and 31.31 um.</p> <p>Images and morphometric data are provided in 9 datasets detailed below. Do note: our slide scanning technique often identifies background light scatter and/or other slide debris (glue, shell fragments, etc.) as ‘objects’, and these objects are numbered in sequence. We have excluded all non-foraminiferal objects from the datasets below, so the object numbers of the foraminifera will often be discontinuous (i.e.: 2,3,4,10,11,16).</p> <p><strong>1) 2d_coordinates.tar</strong> provides the 2D coordinates of each successfully extracted orientation from the 1233 individual <em>Globoconella puncticulata</em> (2811 total successfully extracted orientations) in a single csv (all2dcoordinates.csv). 2d_coordinates.tar also provides a csv for each slide scan at a particular orientation (26 slide scans: 4 samples imaged in 3 orientations, 4 samples imaged in 2 orientations, and 1 sample imaged from 3 orientations with two different 2 Z-step sizes per orientations (i.e., 6 scans for the one sample)).</p> <p><strong>2) 2dmorph_data_all.tar</strong> contains all <em>Globoconella puncticulata</em> with 2D measurements extracted by the<em> AutoMorph</em> routine run2morph (2811 total successfully extracted orientations), and a text file listing all objects with failed 2D extractions and non-forminiferal objects.</p> <p><strong>3) 2d_outline_check.tar</strong> provides an overlay of the extracted 2D outline on the <em>Globoconella puncticulata</em> EDF for quality control purposes for all extracted <em>Globoconella puncticulata</em> (2811 total successfully extracted orientations).</p> <p><strong>5) 3d_obj_files.tar</strong> provides directories for each slide scan with the 3D mesh coordinates as obj files for each extracted <em>Globoconella puncticulata</em> (2270 total successfully extracted orientations). Note: more 3D extractions failed than 2D extractions, accounting for the difference in the number of 2D extractions (2811) and 3D extractions (2270).</p> <p><strong>6) 3d_pdfs.tar</strong> provides directories of each slide scan with the 3D pdfs of each <em>Globoconella puncticulata</em> extracted (2270 total successfully extracted orientations) for quality control purposes. 3D pdfs, meshes and shape measurements were generated by the <em>AutoMorph</em> module run3dmorph. Note that only some pdf viewers are able to display 3d pdfs properly. </p> <p><strong>4) 3dmorph_data.tar</strong> contains a csv file for each slide scan with the 3d measurements generated for each <em>Globoconella puncticulata</em> by the<em> AutoMorph</em> module run3dmorph (2270 total successfully extracted objects in 26 directories representing each slide scan at a particular orientation).</p> <p><strong>7) object_ edf_images.tar</strong> contains the extended depth of focus (EDF)images in 26-directories for each slide scan at a particular orientation. The EDFs are 2D image composites created from the z-stacked photographic images by the <em>AutoMorph</em> focus module. Together, the 26-directories contain 2811 total images representing the successfully extracted 2D orientations.</p> <p><strong>8) </strong><strong>sam</strong><strong>pleID.csv</strong> is a csv of all sample information. This includes the Slide name for the physical slide each sample is on, the Object number on that slide scan for each foraminifera used in the study, and the Ocean Drilling Program information for each object. Ocean Drilling Program details consist of the Leg: the Leg number for the drilling cruise, Site: the Ocean Drilling Program collection site number, the Hole: the drilling hole ID, the Core: the Core number from that drilling site, the core Type: the type of drilling equipment used (H for all these samples which is an advanced hydraulic piston core), the Section: the section number on the core, and the Top and Bottom: the sample top and bottom interval in cm from the top of the section. </p> <p><strong>9) slide_images_boxed.tar</strong> contains one image for each slide view at a particular orientation 26 slide scans: 4 samples imaged in 3 orientations, 4 samples imaged in 2 orientations, and 1 sample imaged from 3 orientations with two different 2 Z-step sizes per orientations (i.e., 6 scans for the one sample). A red box delineates each object extracted using the <em>AutoMorph</em> segment module. Slides are named according to their ocean drilling sample identification (see dataset #10).</p> <p><strong>10) z-stacks.tar.gz </strong>contains the original z-stack images of each <em>Globoconella puncticulata </em>(2811 total representing the successfully extracted 2D orientations) in 26 directories representing each slide scan at a particular orientation).</p>
Text-fig. 3. Filogranula cincta (GOLDFUSS), locality Chrtníky (Early Turonian), no. NM-O7620, a – general view of two specimens attached to a lychniscosan sponge Diplodictyon heteromorphum. Length of the sponge is 60 mm. b – detail of the tubes. Length of the left tube is 5.4 mm. The diameter of the aperture is 1.2 mm. Length of the right tube is 6 mm without the looped posterior portion. The diameter of the aperture is 1.4 mm. Scale bars are 5 mm. in Filogranula Cincta (G , 1831), A Serpulid Worm (Polychaeta, Sedentaria, Serpulidae) From The Bohemian Cretaceous Basin
Text-fig. 3. Filogranula cincta (GOLDFUSS), locality Chrtníky (Early Turonian), no. NM-O7620, a – general view of two specimens attached to a lychniscosan sponge Diplodictyon heteromorphum. Length of the sponge is 60 mm. b – detail of the tubes. Length of the left tube is 5.4 mm. The diameter of the aperture is 1.2 mm. Length of the right tube is 6 mm without the looped posterior portion. The diameter of the aperture is 1.4 mm. Scale bars are 5 mm.
FIGURE 3. Proloculus diameters. 1 in Morphological variations in Cycloclypeus carpenteri: Multiple embryos and multiple equatorial layers
FIGURE 3. Proloculus diameters. 1) proloculus diameter for all individuals in the presented population, except for A18. Multiple bars indicate the presence of several proloculi. 2) diameters of all proloculi identified within the specimen A18.
Dataset: Hybrid Polarizing Solids with Extended Pore Diameters for Dissolution Dynamic Nuclear Polarization
<p>This dataset contains raw NMR, EPR, and relaxometry data, N2 adsorption-desorption isotherms for best HYPSOs, and all of the codes, used for data processing and figures in the article.</p>
Chang'e-6 nearby craters within a 1 km diameter and the simulated craters
<p><a href="https://zenodo.org/api/records/13997862/draft/files/CE6_NAC_1km_Circle.txt/content" target="_blank" rel="noopener noreferrer">CE6_NAC_1km_Circle.txt</a> : text file for the craters within a 1-kilometer diameter circle across the CE-6 landing site</p> <p><a href="https://zenodo.org/api/records/13997862/draft/files/producd%20craters.zip/content" target="_blank" rel="noopener noreferrer">producd craters.zip</a> : the generated primary and secondary craters in the four period models (2.4-3.0 Ga). In the each numpy file, the data are saved in a 6*n materix, including the craters diameter, x&y position in pixel, craters indentifier (1 for primary and <1 for the secondary), generated time steps and their impactors, sequentially.</p>
Text-fig. 8. Cross section through the right metatarsal II in distal view. Additionally, the tilt of the greatest shaft diameter compared to the original proximal horizontal orientation is shown. in Castor-Like Postcranial Adaptation In An Uppermost Miocene Beaver From The Staniantsi Basin (Nw Bulgaria)
Text-fig. 8. Cross section through the right metatarsal II in distal view. Additionally, the tilt of the greatest shaft diameter compared to the original proximal horizontal orientation is shown.
Text-fig. 6. a. Vertical section showing part of body-chamber of a Cenoceras in the top of the Main Cenoceras Bed associated with attached oysters below and stringers of crinoid debris below and stretching laterally. Coin 23 mm in diameter. b. Complete lateral half of conch showing intact and elastically deformed septa on which rests crinoid debris that spreads across the exposed septa and onto the adjacent substrate. Conch approximately 180 mm in diameter. c. Individual showing dispersed crinoid and molluscan debris within body-chamber and septa in the crushed inner whorls that have taken a sparite cement prior to, and after having undergone brittle deformation. 160 mm in diameter. d. Vertically embedded specimen showing the loss of septa in the inner whorls that are infilled with matrix mottled by bioturbation. Tape measure provides scale. in 'Cenoceras Islands' In The Blue Lias Formation (Lower Jurassic) Of West Somerset, Uk: Nautilid Dominance And Influence On Benthic Faunas
Text-fig. 6. a. Vertical section showing part of body-chamber of a Cenoceras in the top of the Main Cenoceras Bed associated with attached oysters below and stringers of crinoid debris below and stretching laterally. Coin 23 mm in diameter. b. Complete lateral half of conch showing intact and elastically deformed septa on which rests crinoid debris that spreads across the exposed septa and onto the adjacent substrate. Conch approximately 180 mm in diameter. c. Individual showing dispersed crinoid and molluscan debris within body-chamber and septa in the crushed inner whorls that have taken a sparite cement prior to, and after having undergone brittle deformation. 160 mm in diameter. d. Vertically embedded specimen showing the loss of septa in the inner whorls that are infilled with matrix mottled by bioturbation. Tape measure provides scale.
Text-fig. 8. a. Shell belonging to one flank of the conch a horizontally bedded individual with sveral large oysters attached to its underside indicating that the shell was either originally vertical or was flipped from one surface to the other by turbulance. Approximately 300 mm across. b. Crushed individual showing oysters encrusting both flanks of the conch. 250 mm in diameter. c. Wave-worn conch showing oysters attached to the umbilicus, the venter and possibly the inside of the body-chamber. Tape measure for scale. d. Flank of conch with crinoid debris and oysters spread around its periphery. Scope of image approximately 350 mm. in 'Cenoceras Islands' In The Blue Lias Formation (Lower Jurassic) Of West Somerset, Uk: Nautilid Dominance And Influence On Benthic Faunas
Text-fig. 8. a. Shell belonging to one flank of the conch a horizontally bedded individual with sveral large oysters attached to its underside indicating that the shell was either originally vertical or was flipped from one surface to the other by turbulance. Approximately 300 mm across. b. Crushed individual showing oysters encrusting both flanks of the conch. 250 mm in diameter. c. Wave-worn conch showing oysters attached to the umbilicus, the venter and possibly the inside of the body-chamber. Tape measure for scale. d. Flank of conch with crinoid debris and oysters spread around its periphery. Scope of image approximately 350 mm.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.