Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
151
datasets available to search
ShareScore release 0.9.0
Dataset results
151 results for “global meta-analysis”
Plant secondary metabolic responses to global climate change: A meta-analysis in medicinal and aromatic plants
<p><span>Plant secondary metabolites (SMs) play crucial roles in plant-environment interactions and contribute greatly to human health. Global climate changes are expected to dramatically affect plant secondary metabolism, yet a systematic understanding of such influences is still lacking. Here, we employed medicinal and aromatic plants (MAAPs) as model plant taxa and performed a meta-analysis from 360 publications using 1828 paired observations to assess the responses of different SMs levels and the accompanying plant traits to elevated carbon dioxide (eCO<sub>2</sub>), elevated temperature (eT), elevated nitrogen deposition (eN), and decreased precipitation (dP). The overall results showed that phenolic and terpenoid levels generally respond positively to eCO<sub>2</sub> but negatively to eN, while the total alkaloid concentration was increased remarkably by eN. By contrast, dP promotes the levels of all SMs, while eT exclusively exerts a positive influence on the levels of phenolic compounds. Further analysis highlighted the dependence of SM responses on different moderators such as plant functional types, climate change levels or exposure durations, mean annual temperature and mean annual precipitation. Moreover, plant phenolic and terpenoid responses to climate changes could be attributed to the variations in C/N ratio and total soluble sugar levels, while the <em>trade-off</em> supposition contributed to SM responses to climate changes other than eCO<sub>2</sub>. Taken together, our results predicted the distinctive SM responses to diverse climate changes in MAAPs, and allowed us to define potential moderators responsible for these variations. Further, linking SM responses to C-N metabolism and growth-defence balance provided biological understandings in terms of plant secondary metabolic regulation.</span></p>
It's a wormy world: Meta-analysis reveals several decades of change in the global abundance of the parasitic nematodes Anisakis spp. and Pseudoterranova spp. in marine fishes and invertebrates
<p>The Anthropocene has brought substantial change to ocean ecosystems, but whether this age will bring more or less marine disease is unknown. In recent years, the accelerating tempo of epizootic and zoonotic disease events has made it seem as if disease is on the rise. Is this apparent increase in disease due to increased observation and sampling effort, or to an actual rise in the abundance of parasites and pathogens? We examined the literature to track long-term change in the abundance of two parasitic nematode genera with zoonotic potential: <em>Anisakis</em> spp. and <em>Pseudoterranova</em> spp. These anisakid nematodes cause the disease anisakidosis and are transmitted to humans in undercooked and raw marine seafood. A total of 123 papers published between 1967 and 2017 met our criteria for inclusion, from which we extracted 755 host–parasite–location–year combinations. Of these, 69.7% concerned <em>Anisakis</em> spp. and 30.3% focused on <em>Pseudoterranova</em> spp. Meta-regression revealed an increase in <em>Anisakis</em> spp. abundance (average number of worms/ fish) over a 53 year period from 1962 to 2015 and no significant change in <em>Pseudoterranova</em> spp. abundance over a 37 year period from 1978 to 2015. Standardizing changes to the period of 1978–2015, so that results are comparable between genera, we detected a significant 283-fold increase in <em>Anisakis</em> spp. abundance and no change in the abundance of <em>Pseudoterranova</em> spp. This increase in <em>Anisakis</em> spp. abundance may have implications for human health, marine mammal health, and fisheries profitability.</p>
Urbanization decreases species richness, and increases abundance in dry climates whereas decreases in wet climates: A global meta-analysis
<p>Soil invertebrates have an essential role in decomposition, nutrient turnover and soil structure formation, all of which are strongly threatened by urbanization. Sealing, compaction by trampling and pollution destroy and degrade city soils and potentially damage soil-living invertebrates. The existing literature on how urbanization affects soil invertebrates is inconsistent, presenting both negative and positive effects. Therefore, here we aimed to synthesize the effects of urbanization on soil invertebrates considering their taxonomic (Acari, Annelida, Carabidae, Collembola, Gastropoda, Isopoda, Myriapoda, Nematoda) and functional (soil living vs. soil-related; mobility) identities, as well as to examine how the overall effect is modulated by climatic conditions (total annual precipitation, annual mean ambient temperature), urban heat island effect (based on ambient temperature differences between urban and rural areas) and city population. In a systematic review using hierarchical and categorical meta-analyses, we extracted 158 effect sizes from 75 studies on abundance and 125 effect sizes from 84 studies on species richness. Invertebrate abundance showed an increase, whereas species richness significantly decreased with increasing urbanization. The reason behind this could be that a few generalist species can adapt well to the urban environment and achieve strongly elevated densities. The species richness of annelids, springtails, and snails decreased with advancing urbanization, most probably because these animals are sensitive to soil compaction and pollution, both of which are common consequences of urbanization. The temperature did not modify the effects of urbanization, but precipitation modified the effects on abundance. Abundance increased with advancing urbanization in drier climates, probably because irrigation increased soil moisture, whereas it decreased in wet climates, as urban areas were drier than their surroundings. Making future cities more climate-neutral could better sustain soil biodiversity.</p>
Impacts of ecological restoration on the genetic diversity of plant species: A global meta-analysis
<p>1. In contrast to the depth of knowledge available for the enhancement of plant species diversity and ecosystem services through ecological restoration, our understanding of how ecological restoration impacts genetic diversity (GD) of plant species has not yet been synthesized.</p> <p>2. We performed a global meta-analysis to examine whether ecological restoration improved GD of plant species in restored populations. First, we compared the GD of restored populations with reference or degraded populations. Second, we explored whether the influence of ecological restoration on plant GD varies between species with different characteristics (life form and threat status), between different restoration strategies (active/passive, seeding/planting, mixture/non-mixture) or between different restoration times (<50 and ≥50 years; with an average of 29.3 years).</p> <p>3. The GD of restored populations was significantly lower (HE, 1.06%; PPB, 5.10%, and SWI, 4.95%) than in reference populations but was comparable to degraded populations. The inbreeding coefficient (FIS, the proportion by which the heterozygosity of an individual is reduced by inbreeding) was consistently comparable between restored populations and reference or degraded populations.</p> <p>4. Woody species but not herbs had significantly lower GD in restored populations than in reference populations. Forest but not grassland ecosystem had significantly lower GD in restored populations than in reference populations. Passive but not active restoration, seeding rather than planting, and mixing materials from different sources rather than using a single source, all significantly increased the GD of restored populations. When the restoration time was ≥50 years, in contrast to <50 years, GD was comparable between the restored and reference populations.</p> <p>5. Synthesis and applications. In general, ecological restoration did not significantly improve the GD of plant species compared to reference or degraded populations. This might be due in part to the relatively short restoration time. Using passive restoration, seeding, and mixed sources could significantly increase the GD of restored populations. We emphasize that GD should not be treated as a minor cobenefit of ecological restoration for other purposes and that the recovery of GD should be listed as a vital goal in future ecological restoration with plant species.</p>
Data and R code for: "Global meta-analysis shows reduced quality of food crops under inadequate animal pollination"
<p>R code, data, and metadata for the study "Global meta-analysis shows reduced quality of food crops under inadequate animal pollination"</p>
Plant invasion and fertilizer addition alter soil biota and their functions: A global meta-analysis
<p>Datasets used for meta-analysis on plant invasion and fertilizer addition effects on soil biota and their functions.</p>
A global synthesis and meta-analysis of the environmental heterogeneity effects on the freshwater biodiversity
<p>In this study, we aimed to synthesize the global knowledge about the relationship between spatial Environmental Heterogeneity (EH) and freshwater biodiversity (i.e., taxonomic and functional diversity, and their respective α and β components). Through a systematic review, we integrated results from 98 studies, published in 33 different countries, about the role of spatial EH – biodiversity relationship in freshwater ecosystems. Following the PRISMA-ecoevol criteria, we generated a dataset with 276 observations of the effect of EH – biodiversity relationship. For the meta-analysis, we extracted the effect size from 74 studies that effectively tested the effect of EH over any metric of biodiversity. Through this subset, we provided 242 individual effect sizes with their respective variances and sample sizes.</p>
Data from: Global evaluation of inhibitor impacts on ammonia and nitrous oxide emissions from agricultural soils: A meta-analysis
Open the record for dataset details and reuse information.
Global meta-analysis of individual and combined nitrogen inhibitors: Enhancing plant productivity and reducing environmental losses
Open the record for dataset details and reuse information.
Plant secondary metabolic responses to global climate change: A meta-analysis in medicinal and aromatic plants
Open the record for dataset details and reuse information.
Multiple global changes drive grassland productivity and stability: A meta-analysis
Open the record for dataset details and reuse information.
Data from: The effects of climate change on mesocarnivores: A global review and meta-analysis
Open the record for dataset details and reuse information.
A global meta-analysis of yield-scaled N2O emissions and its mitigation efforts for maize, wheat, and rice
Open the record for dataset details and reuse information.
Trophic regulation of soil microbial biomass under nitrogen enrichment: A global meta-analysis
Open the record for dataset details and reuse information.
A global synthesis and meta-analysis of the environmental heterogeneity effects on the freshwater biodiversity
Open the record for dataset details and reuse information.
Plant invasions alter soil biota and microbial activities: A global meta-analysis
Open the record for dataset details and reuse information.
Impacts of ecological restoration on the genetic diversity of plant species: A global meta-analysis
Open the record for dataset details and reuse information.
Data for: Warming enhances the effects of acidification on aquatic biota: a global meta-analysis
Open the record for dataset details and reuse information.
It's a wormy world: Meta-analysis reveals several decades of change in the global abundance of the parasitic nematodes Anisakis spp. and Pseudoterranova spp. in marine fishes and invertebrates
Open the record for dataset details and reuse information.
Cover crop mixtures enhance multiple ecosystem functions: A global meta-analysis
Open the record for dataset details and reuse information.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.