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234 results for “molecular characterisation”
Fig. 5 in Haematozoa of the Great Blue Turacos, Corythaeola cristata (Vieillot, 1816) (Aves: Musophagiformes: Musophagidae) imported to Singapore Jurong Bird Park with description and molecular characterisation of Haemoproteus (Parahaemoproteus) minchini new species (Apicomplexa: Haemosporidia: Haemoproteidae)
Fig. 5. Molecular phylogeny based on the apicoplast tufA gene illustrating the position of Haemoproteus (Parahaemoproteus) minchini new species within the haemosporidian parasites. The analysis was performed by Maximum Likelihood (ML) method with GTR+Γ+I model on 19 sequences from identified species (18 Plasmodium from Bird, Rodents and Primates and 1 Leucocytozoon used as out-group to root the tree) downloaded from GenBank (fragment size 814 bp) and our sequence of H. minchini new species [KU160479]. Statistical branch support (>50%) is provided by bootstrap values (1,000 replicates) on the branches. GenBank accession numbers are in vertical bars.
Fig. 4 in Haematozoa of the Great Blue Turacos, Corythaeola cristata (Vieillot, 1816) (Aves: Musophagiformes: Musophagidae) imported to Singapore Jurong Bird Park with description and molecular characterisation of Haemoproteus (Parahaemoproteus) minchini new species (Apicomplexa: Haemosporidia: Haemoproteidae)
Fig. 4. Molecular phylogeny based on the apicoplast clpC gene illustrating the position of Haemoproteus (Parahaemoproteus) minchini new species within the avian haemosporidian parasites. The analysis was performed by Maximum Likelihood (ML) method with GTR+Γ+I model on 31 sequences from identified species (16 Haemoproteus, 13 Plasmodium and 2 Leucocytozoon used as out-group to root the tree) downloaded from GenBank (fragment size 505bp) and our sequence of H. minchini new species [KU160478]. Statistical branch support (>60%) is provided by bootstrap values (1,000 replicates) on the branches. GenBank accession numbers are in vertical bars.
Fig. 3 in Haematozoa of the Great Blue Turacos, Corythaeola cristata (Vieillot, 1816) (Aves: Musophagiformes: Musophagidae) imported to Singapore Jurong Bird Park with description and molecular characterisation of Haemoproteus (Parahaemoproteus) minchini new species (Apicomplexa: Haemosporidia: Haemoproteidae)
Fig. 3. Molecular phylogeny based on the mitochondrial cox1 gene illustrating the position of Haemoproteus minchini new species within the avian haemosporidian parasites. The analysis was performed by Maximum Likelihood method (ML) with GTR+Γ+I model on 28 sequences from identified species (16 Haemoproteus, 10 Plasmodium and 2 Leucocytozoon used as out-group to root the tree) downloaded from GenBank (fragment size 918bp) and our sequence of H. minchini new species [KU160477]. Statistical branch support (>60%) is provided by bootstrap values (1,000 replicates) on the branches. GenBank accession numbers are in vertical bars.
Fig. 1 in Haematozoa of the Great Blue Turacos, Corythaeola cristata (Vieillot, 1816) (Aves: Musophagiformes: Musophagidae) imported to Singapore Jurong Bird Park with description and molecular characterisation of Haemoproteus (Parahaemoproteus) minchini new species (Apicomplexa: Haemosporidia: Haemoproteidae)
Fig. 1. Microphotographs of Haemoproteus (Parahaemoproteus) minchini new species from the blood of the Great Blue Turaco (Corythaeola cristata). A, ring; B–C, young gametocytes; E–K, macrogametocytes; D, L, early microgametocyte; M–P, microgametocytes. Giemsa stained thin blood film from hapantotype material. Scale bar = 10 µm.
Fig. 2 in Haematozoa of the Great Blue Turacos, Corythaeola cristata (Vieillot, 1816) (Aves: Musophagiformes: Musophagidae) imported to Singapore Jurong Bird Park with description and molecular characterisation of Haemoproteus (Parahaemoproteus) minchini new species (Apicomplexa: Haemosporidia: Haemoproteidae)
Fig. 2. Molecular phylogeny based on the mitochondrial cytb gene illustrating the position of Haemoproteus (Parahaemoproteus) minchini new species within the avian haemosporidian parasites. The analysis was performed by Maximum Likelihood (ML) method with GTR+Γ+I model on 79 identified morpho-species sequences (49 Haemoproteus, 21 Plasmodium and 9 Leucocytozoon used as out-group to root the tree) recorded into the MalAvi database (fragment size 479bp) and our sequence of H. minchini new species [KU160476]. Statistical branch support (>60%) is provided by bootstrap values (1,000 replicates) on the branches. MalAvi accession numbers are in square bracket and GenBank accession numbers are in vertical bars.
Fig. 4 in Icosiella Neglecta (Nematoda, Onchocercidae) In Ukraine: Occurrence, Hosts, Morphological And Molecular Characterisation
Fig. 4. Anterior end (A, B) and transverse sections (C–F) of Icosiella neglecta: A — anterior end in lateral view; B — anterior end in dorso-ventral view; C — transverse section through mid-region of muscular oesophagus; D — transverse section through glandular oesophagus (goe) and vagina (v) of female; E — transverse section through glandular oesophagus (goe) and anterior part of testis (t) of male; F — transverse section through midbody of male showing testis (t) and intestine (i).
Fig. 7 in Icosiella Neglecta (Nematoda, Onchocercidae) In Ukraine: Occurrence, Hosts, Morphological And Molecular Characterisation
Fig. 7. UPGMA analysis based on 90 COI sequences of Icosiella neglecta from different localities. One sequence obtained in the present study, two sequences retrieved from Genbank (accession numbers KP760138 and KP760189) and 87 retrieved from the supplementary file to Mikulíček et al. (2021) following the original numbers.
Fig. 3 in Icosiella Neglecta (Nematoda, Onchocercidae) In Ukraine: Occurrence, Hosts, Morphological And Molecular Characterisation
Fig. 3. Apical morphology of Icosiella neglecta: A — scanning electron microscopy of apical extremity; B — en face view of apical extremity; C — oral opening (arrow); D — cuticularised ring between oral opening and oesophagus (arrow); E — entrance to oesophageal lumen (arrow); F — amphidial opening (arrow); s — apical spikes, p — papillae, a — amphid.
Fig. 6 in Icosiella Neglecta (Nematoda, Onchocercidae) In Ukraine: Occurrence, Hosts, Morphological And Molecular Characterisation
Fig. 6. Males of Icosiella neglecta: A — general view; B — anterior part of body, left lateral view; C — posterior part of body, right lateral view; D — posterior part of body, ventral view; E — posterior end with shorter spicule on the right side of body, right lateral view; F — posterior end with shorter spicule on the left side of body, left lateral view; oe-ij — oesophago-intestinal junction, ed — ejaculatory duct.
Fig. 5 in Icosiella Neglecta (Nematoda, Onchocercidae) In Ukraine: Occurrence, Hosts, Morphological And Molecular Characterisation
Fig. 5. Females (A–E) and microfilariae (F) of Icosiella neglecta: A — anterior part of body, right lateral view; B — posterior part of body, left lateral view; C — proximal end of ovary (ov) in posterior part of body; D — region of vulva, right lateral view; E — posterior end of body, left lateral view; F — microfilariae from ovejector; moe — muscular oesophagus, nr — nerve-ring, goe — glandular oesophagus, v — vulva, oj — ovejector, sr — seminal receptacle, vv — vagina vera, vu — vagina uterina, r — rectum, a — anus.
Supplementary data files for: Huston, D.C., Cribb, T.H. and Smales, L.R. 20XX. Molecular characterisation of acanthocephalans from Australian marine teleosts: proposal of a new family, synonymy of another and transfer of taxa between orders. Systematic Parasitology, Jan 2020.
<p>These are the supplementary data files for the manuscript "<strong>Molecular characterisation of acanthocephalans from Australian marine teleosts: proposal of a new family, synonymy of another and transfer of taxa between orders." </strong>Published in the Journal Systematic Parasitology on the 7 of January 2020.</p> <p>Included are the Nexus and Phylip alignment files used for the phylogenetic analyses, and the resulting tree files (in nexus format).</p> <p> </p>
Molecular characterisation of Crimean-Congo haemorrhagic fever virus detected in African blue ticks feeding on cattle in a Ugandan abattoir
<p>CCHFV multiple sequence alignments and maximum likelihood phylogeny treefiles.</p>
Fig. 1 in The neglected diversity: Description and molecular characterisation of Trypanosoma haploblephari Yeld and Smit, 2006 from endemic catsharks (Scyliorhinidae) in South Africa, the first trypanosome sequence data from sharks globally
Fig. 1. Map of sampling sites on the south coast of South Africa.
Fig. 2 in Icosiella Neglecta (Nematoda, Onchocercidae) In Ukraine: Occurrence, Hosts, Morphological And Molecular Characterisation
Fig. 2. Icosiella neglecta in host leg (A) and throat (B) muscles.
Fig. 1 in Icosiella Neglecta (Nematoda, Onchocercidae) In Ukraine: Occurrence, Hosts, Morphological And Molecular Characterisation
Fig. 1. Studied localities in Ukraine. Numbers correspond to those in table 1.
Data from: Molecular characterisation of faecal bacterial assemblages among four species of syntopic odonates
Open the record for dataset details and reuse information.
Data from: Molecular characterisation of trophic ecology within an island radiation of insect herbivores (Curculionidae: Entiminae: Cratopus).
The phytophagous beetle family Curculionidae is the most species-rich insect family known, with much of this diversity having been attributed to both co-evolution with food plants and host-shifts at key points within the early evolutionary history of the group. Less well understood is the extent to which patterns of host use vary within or among related species, largely because of the technical difficulties associated with quantifying this. Here we develop a recently characterised molecular approach to quantify diet within and between two closely related species of weevil occurring primarily within dry forests on the island of Mauritius. Our aim is to quantify dietary variation across populations and assess adaptive and non-adaptive explanations for this, and to characterise the nature of a trophic shift within an ecologically distinct population within one of the species. We find that our study species are polyphagous, consuming a much wider range of plants than would be suggested by the literature. Our data suggest that local diet variation is largely explained by food availability, and locally specialist populations consume food plants that are not phylogenetically novel, but do appear to represent a novel preference. Our results demonstrate the power of molecular methods to unambiguously quantify dietary variation across populations of insect herbivores, providing a valuable approach to understanding trophic interactions within and among local plant and insect herbivore communities.
FIGURE 7 in Epimeria schiaparelli sp. nov., an amphipod crustacean (family Epimeriidae) from the Ross Sea, Antarctica, with molecular characterisation of the species complex
FIGURE 7. Epimeria schiaparelli sp. nov. Colour patterns. A, irregular orange patches, paratype, NIWA 18182; B, striped form, ovigerous female paratype, NIWA 18176.
FIGURE 2 in Epimeria schiaparelli sp. nov., an amphipod crustacean (family Epimeriidae) from the Ross Sea, Antarctica, with molecular characterisation of the species complex
FIGURE 2. Epimeria schiaparelli sp. nov. Holotype, 29.9 mm, NIWA 18174. A, maxilla 2; B, maxilla 1; C, mandible; D, maxilliped; E, lower lip.
FIGURE 4 in Epimeria schiaparelli sp. nov., an amphipod crustacean (family Epimeriidae) from the Ross Sea, Antarctica, with molecular characterisation of the species complex
FIGURE 4. Epimeria schiaparelli sp. nov. Holotype, 29.9 mm, NIWA 18174. A, gnathopod 1; B, detail of gnathopod 1; C, gnathopod 2; D, detail of gnathopod 2.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.