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Sharpness metric results and Instron method script for 'Raw Material Sharpness and Lithic Patterns: An Analysis of Holocene Susitna River Basin, Central Alaska' MPhil dissertation
<p>Data for appendix B in 'Raw Material Sharpness and Lithic Patterns: An Analysis of Holocene Susitna River Basin, Central Alaska' MPhil dissertation. This data set Includes initial and dulled sharpness metric data from the Instron® experiment for each flake. It also includes the Instron® bluehill method program script.</p>
Fig. 5 in Geometric morphometric analysis of cyclical body shape changes in color pattern variants of Cichla temensis Humboldt, 1821 (Perciformes: Cichlidae) demonstrates reproductive energy allocation
Fig. 5. Relative mean GSI vs. relative mean HSI of color pattern variants of Cichla temensis. Points for GSI represent the mean value for each CPV grade as compared to the range encountered. Points for HSI represent the mean value for each CPV grade compared to the range encountered.
Fig. 3 in Geometric morphometric analysis of cyclical body shape changes in color pattern variants of Cichla temensis Humboldt, 1821 (Perciformes: Cichlidae) demonstrates reproductive energy allocation
Fig. 3. Biplot of the uniform components in each direction (UniX and UniY) of morphometrical differences in 80 specimens of Cichla temensis in 4 color variation patterns (CPV) as measured by 9 Thin Plate Spline (TPS) distortion variables (V1-V9). Colored numbers indicate the CPV grade of individuals. The total spread of scores among individuals of each CPV are indicated by an envelope (solid line polygon) calculated as the minimum convex hull for that group. Position in the plot relative to other individuals indicates the degree of similarity in morph. Vectors point in the direction of gradient change for that TPS variable and the magnitude indicates the strength of the gradient. Angles between vectors indicate the TPS interset correlations.
Fig. 5 in Fig. 7 in Reproduction of the Blue Jack Mackerel, , in Western Portugal: Microscopic Gonad Analysis Reveals Indeterminate Fecundity and Skipped Spawning Patterns.
Fig. 5. Mean (± standard error) gonadosomatic index (GSI), hepatosomatic index (HSI), and relative condition (Kn) for blue jack mackerel (Trachurus picturatus) females off the western coast of Portugal by maturation phase and abnormal condition. I, immature; D, developing; SC, spawning capable; AS, actively spawning; RS, regressing; RN, regenerating; CS, reproductive inactive ovaries with cystic structures; MA, spawning capable individuals with massive atresia; K, Kudoa spp.-infected ovaries. Sample size for each group is given between brackets in the x-axis.
Fig. 4 in Fig. 7 in Reproduction of the Blue Jack Mackerel, , in Western Portugal: Microscopic Gonad Analysis Reveals Indeterminate Fecundity and Skipped Spawning Patterns.
Fig. 4. Histological sections of ovaries of blue jack mackerel (Trachurus picturatus) with abnormalities: a) reproductive inactive ovaries with cystic structures with only PG and early SG oocytes (female with 38.1 cm TL, caught in the first half of January); b) reproductive inactive ovaries with massive cystic structures with only a few PG oocytes remaining (female with 26.2 cm TL, caught in the first half of March); c) spawning capable individuals with massive atresia (female with 25.8 cm TL, caught in second half of February); d) Kudoa spp.-infected ovary (female with 25.5 cm TL, caught on the first half of March); e) actively spawning (female with 31.1 cm TL, caught on the second half of March); f) regressing female with massive atresia (female with 27.3 cm TL, caught in April). *, Kudoa spp. infection; AVTG, advance vitellogenic oocytes; At, atresia; AtSt, atretic structures; CA, cortical alveoli oocytes; EVTG, early vitellogenic oocytes; H, hydrated oocytes; PG, primary growth oocytes.
Fig. 3 in Fig. 7 in Reproduction of the Blue Jack Mackerel, , in Western Portugal: Microscopic Gonad Analysis Reveals Indeterminate Fecundity and Skipped Spawning Patterns.
Fig. 3. Mean (± standard error) gonadosomatic index (GSI), hepatosomatic index (HSI), and relative condition (Kn) for blue jack mackerel (Trachurus picturatus) females (black dots) and males (open triangles) off the western coast of Portugal by sampling date. Sea surface temperature (SST, grey shadow). 1st half, month first fortnight; 2nd half, month second fortnight.
Fig. 7 in Fig. 7 in Reproduction of the Blue Jack Mackerel, , in Western Portugal: Microscopic Gonad Analysis Reveals Indeterminate Fecundity and Skipped Spawning Patterns.
Fig. 7. Relationships between batch fecundity and total length (TL) and eviscerated weight (EW) for blue jack mackerel (Trachurus picturatus) females caught off the western coast of Portugal.
Fig. 2 in Fig. 7 in Reproduction of the Blue Jack Mackerel, , in Western Portugal: Microscopic Gonad Analysis Reveals Indeterminate Fecundity and Skipped Spawning Patterns.
Fig. 2. Maturity phase frequency by sampling date for blue jack mackerel (Trachurus picturatus) females and males caught off the western coast of Portugal. D, developing; SC, spawning capable; AS, actively spawning; RS, regressing; RN, regenerating. 1st half, month first fortnight; 2nd half, month second fortnight.
Fig. 6 in Fig. 7 in Reproduction of the Blue Jack Mackerel, , in Western Portugal: Microscopic Gonad Analysis Reveals Indeterminate Fecundity and Skipped Spawning Patterns.
Fig. 6. Fecundity type of blue jack mackerel (Trachurus picturatus) off the western coast of Portugal, assessed from the variation throughout the spawning season of a) oocyte size frequency distribution; b) abundance of early developing oocytes (white) and advanced vitellogenic oocytes (grey); c) mean oocyte diameter (OD) of the advanced vitellogenic oocytes. Boxplot represents median, first and third quartiles, whiskers represent 1.5 × interquartile range and dots are possible outliers. 1st half, month first fortnight; 2nd half, month second fortnight.
Fig. 1 in Fig. 7 in Reproduction of the Blue Jack Mackerel, , in Western Portugal: Microscopic Gonad Analysis Reveals Indeterminate Fecundity and Skipped Spawning Patterns.
Fig. 1. Map of Portugal showing the continental slope: the surveys were conducted along the coast at 20–300 m deep (represented by the rectangle in the figure).
Figure 2 in Characteristic analysis of prolactin and its receptor genes from Rana chensinensis and expression pattern during metamorphosis
Figure 2. Nucleotide and deduced aa sequences of rcPRLR. The predicted site of signal peptide cleavage is marked by a triangle. The conserved cysteine residues are circled. Three potential N-glycosylation sites are underlined by dotted lines. The WS motif is boxed and TMD is underlined with a solid line. Within the ICD, boxes 1 and 2 are underlined with a double line and a wavy line, respectively. The stop codon is marked by an asterisk.
Figure 7 in Characteristic analysis of prolactin and its receptor genes from Rana chensinensis and expression pattern during metamorphosis
Figure 7. Expression analysis of rcPRLR by qRT-PCR in liver (A), skin (B), tail (C), and kidneys (D) of different stages. The data for rcPRLR mRNA levels were normalized by those for rpl8 mRNA levels and expressed relative to the value for stage 43 tissue, respectively. The experiments were repeated 3 times using 3 independent biological samples. Each bar represents mean ± SD. Those with different letters were regarded as statistically significant at the 5% level (Duncan test).
Figure 6 in Characteristic analysis of prolactin and its receptor genes from Rana chensinensis and expression pattern during metamorphosis
Figure 6. Detection of rcPRL and rcPRLR in tadpoles by RT-PCR. (A) and (B): Upper panel, RT-PCR using rcPRL and rcPRLR gene-specific primers, respectively; lower panel, control RT-PCR using rpl8 gene-specific primers.
Figure 1 in Characteristic analysis of prolactin and its receptor genes from Rana chensinensis and expression pattern during metamorphosis
Figure 1. Nucleotide and deduced aa sequences of rcPRL. The predicted site of signal peptide cleavage is marked by a triangle. The conserved cysteine residues are circled and the potential phosphorylation site is boxed, while the four α-helical domains are boxed in shaded rectangles. The stop codon is marked by an asterisk.
Figure 5 in Characteristic analysis of prolactin and its receptor genes from Rana chensinensis and expression pattern during metamorphosis
Figure 5. Construction of neighbor-joining tree based on aa sequences of PRL (A) and PRLR (B). The sequences used above are: Rana catesbeiana (CAA34199.1, BAD14941.1), Xenopus laevis (AAH75216.1, AAI70439.1), Chelonia mydas (XP_007059983.1, EMP31801.1), Anser anser (ADG03649.1, ABW74516.1), Sus scrofa (NP_999091.1, ABA41035.1), Mus musculus (P06879.1, CAA51789.1), Homo sapiens (NP_001157030.1, NP_000940.1), Oncorhynchus mykiss (NP_001118205.1, NP_001118071.1), Danio rerio (AAH92358.1, AAI63012.1), Bufo japonicus (BAF75354.1), and Cynops pyrrhogaster (BAB61107.1). Bootstrap percentage values are indicated for each node.
Figure 4 in Characteristic analysis of prolactin and its receptor genes from Rana chensinensis and expression pattern during metamorphosis
Figure 4. Alignment of aa sequences of various PRLRs. Conserved cysteines are circled; 3 potential N-glycosylation sites (His 212; WS motif, Box 1; and DSGRGS motif) are marked by boxes; Trp165 and Tyr609 are marked by triangles. Dots (·) represent spaces inserted to maximize similarity, and small letters represent the conserved amino acids in that position.
Figure 3 in Characteristic analysis of prolactin and its receptor genes from Rana chensinensis and expression pattern during metamorphosis
Figure 3. Alignment of aa sequences of various PRLs. Conserved cysteines are boxed, while motifs 1 and 2 are marked by arrows.
Figure4 in Analysis of Behavioural Patterns of the Amazonian Manatee, Trichechus manatus manatus, under Human Care (Mammalia:Sirenia)
Figure4. Space use data of the manatee individuals linked to the referring numbers on the map; 1 - 10 deepwater zone (Z); 11/12 semi-deep-water zone (Y); 13/14 shallow-water zone (X)
Figure3 in Analysis of Behavioural Patterns of the Amazonian Manatee, Trichechus manatus manatus, under Human Care (Mammalia:Sirenia)
Figure3. Map of the manatee tank divided into grid squares, each filled with similar volume of water; 1 - 10 deep-water zone (Z); 11/12 semi-deep-water zone (Y); 13/14 shallow-water zone (X)
Fig. 1 in Comparative analysis of morphospace of Neotropical Sericini (Coleoptera: Scarabaeidae): disparity in the light of species diversity and activity patterns
Fig. 1 Measured traits and specimen habitus (examples). Schematic drawings of a Sericini beetle (from Ahrens, 2004): A dorsal view; D partial lateral aspect; B head, dorsal view, C head lateral view; E leg, ventrolateral view; F Maladera cardoni; G Neoserica sp.; H Anomioserica sp.; I Oxyserica sp.; J Symmela mutabilis; K Astanea producta. EL maximal elytra length, EW maximal body width, MEL maximal length of metepisternum, ED maximal eye diameter, IOD minimal interocular distance, MCL maximal length of metacoxa, MTL maximal length of metatibia, MTW maximal width of metatibia
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.