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datasets available to search
ShareScore release 0.9.0
Dataset results
69 results for “processing maps”
HiCUP: pipeline for mapping and processing Hi-C data
GEO Series GSE73204. Mus musculus. 3 samples. Type: Other.
Genome-wide mapping implicates R-loops in lineage-specific processes and DNA break hotspot formation in neural stem/progenitor cells
GEO Series GSE195963. Mus musculus. 2 samples. Type: Other.
A quantitative map of human primary microRNA processing sites [2]
GEO Series GSE174222. Homo sapiens. 18 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Mapping prohormone processing by proteases in human enteroendocrine cells using genetically engineered organoid models
GEO Series GSE212636. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Systematic Mapping of ADAR1 Binding Reveals its Regulatory Roles in Multiple RNA Processing Pathways [CLIP-seq]
GEO Series GSE55361. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Mapping of DNA methylation-sensitive cellular processes in gingival fibroblasts using the DNMT inhibitor decitabine
GEO Series GSE216757. Homo sapiens. 20 samples. Type: Expression profiling by high throughput sequencing.
Integrative regulatory mapping indicates that the RNA-binding protein HuR (ELAVL1) couples pre-mRNA processing and mRNA stability
GEO Series GSE29780. Homo sapiens. 13 samples. Type: Expression profiling by array; Other.
Integrative regulatory mapping indicates that the RNA-binding protein HuR (ELAVL1) couples pre-mRNA processing and mRNA stability [sequence data]
GEO Series GSE29779. Homo sapiens. 1 samples. Type: Other.
Genome-wide maps of primary and processed start-sites of transcripts revealed mechanism controlling in vivo stoichiometry of protein complex in bacteria
GEO Series GSE57652. Ruminiclostridium cellulolyticum. 12 samples. Type: Expression profiling by high throughput sequencing.
Introducing Differential RNAseq mapping to track the phage infection process for Pseudomonas virus ɸKZ
GEO Series GSE153067. Phikzvirus phiKZ; Pseudomonas aeruginosa PAO1. 8 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide maps of hnRNP UL1 binding on DNA during the inflammatory process.
GEO Series GSE196201. Mus musculus. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Mapping potential for Working with Natural Processes (Wales)
<p>Areas with potential for managing flood risk by protecting, restoring and emulating the natural regulating function of catchments and rivers. </p> <p>The areas are classified according to the features defined in Section 2 of the guide published here:<br> <br> https://assets.publishing.service.gov.uk/government/uploads/system/uploads/attachment_data/file/725264/Working_with_natural_processes_mapping_user_guide.pdf<br> <br> The areas of the features described in that report have been computed per Water Framework Directive cycle 2 Waterbody catchment polygons.</p> <p>Input data sets are:</p> <p>WFD River Waterbody Catchments Cycle 2 (Open Government licence)<br> WWNP layers (all are supplied under open government licence) for:<br> Floodplain Reconnection Potential<br> Riparian Woodland Potential<br> Floodplain Woodland Potential<br> Wider Catchment Woodland Potential<br> Runoff Attenuation Features 1% AEP<br> Runoff Attenuation Features 3.3% AEP<br> Woodland data constrained by woodland constraints<br> Predictive Agricultural Land Classification (ALC) </p> <p>All input data sets are available from data.gov.uk under the Open Government License http://www.nationalarchives.gov.uk/doc/open-government-licence/version/3/</p>
Data from: An indexed, mapped mutant library enables reverse genetics studies of biological processes in Chlamydomonas reinhardtii
The green alga Chlamydomonas reinhardtii is a leading single-celled model for dissecting biological processes in photosynthetic eukaryotes. However, its usefulness has been limited by difficulties in obtaining mutants in genes of interest. To allow generation of large numbers of mapped mutants, we developed high-throughput methods which: (1) Enable easy propagation on agar and cryogenic maintenance of tens of thousands of C. reinhardtii strains; (2) Identify mutant insertion sites and physical coordinates in such collections; (3) Validate the insertion sites in pools of mutants by obtaining >500 bp of flanking genomic sequences. We used these approaches to construct a stably maintained library of 1,935 mapped mutants, representing disruptions in 1,562 genes. We further characterized randomly selected mutants, and found that 33 out of 44 insertion sites (75%) could be confirmed by PCR, and 17 out of 23 mutants (74%) contained a single insertion. To demonstrate the power of this library for elucidating biological processes, we analyzed the lipid content of mutants disrupted in genes encoding proteins of the algal lipid droplet proteome. This study revealed a central role of the long-chain acyl-CoA synthetase LCS2 in the production of triacylglycerol from de novo synthesized fatty acids.
Mapping of Use Cases to ISO 12207 Processes
<p>Mapping of software analytics use cases to software life cycle processes from ISO/IEC/IEEE 12207:2017 (IEEE Access paper: On Adopting Software Analytics for Managerial Decision-Making: A Practitioner's Perspective).</p>
Cryo-EM map anisotropy can be attenuated by map post-processing and a new method for its estimation. Example Maps
<p>These are the post-processed maps displayed in the manuscript</p> <p>"Cryo-EM map anisotropy can be attenuated by map post-processing and a new method for its estimation"</p>
Process Mapping to Optimize Child Psychosocial Screenings in Primary Care, and Increase Family Service Linkages
ClinicalTrials.gov study NCT06989476. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Mapping and Modulating the Spatiotemporal Dynamics of Socio-Affective Processing
ClinicalTrials.gov study NCT05418894. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Mapping Post-falls Organisational Processes in Care Homes
ClinicalTrials.gov study NCT07350408. IPD Sharing: YES. Countries: 1. Publications: 0.
Process Mapping and Data Collection to Inform a Computer Simulation Model of Hospitalised Patients With Bloodstream Infection, Sepsis and Systemic Infection
ClinicalTrials.gov study NCT06271031. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Data from: An indexed, mapped mutant library enables reverse genetics studies of biological processes in Chlamydomonas reinhardtii
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.