Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
61
datasets available to search
ShareScore release 0.7.1
Dataset results
61 results for “root dynamics”
Drought influences fungal community dynamics in the grapevine rhizosphere and root microbiome
<p>xxx</p>
Water availability drives fine root dynamics in a Eucalyptus woodland under elevated atmospheric CO2 concentration
Open the record for dataset details and reuse information.
Data from: Regulatory RNA at the root of animals: dynamic expression of developmental lincRNAs in the calcisponge Sycon ciliatum
Open the record for dataset details and reuse information.
Reprogramming of root cells during nitrogen-fixing symbiosis entails dynamic polysome association of coding and non-coding RNAs
GEO Series GSE133510. Medicago truncatula. 8 samples. Type: Expression profiling by high throughput sequencing.
The dynamic and diverse nature of parenchyma cells in the Arabidopsis root during secondary growth
GEO Series GSE270140. Arabidopsis thaliana. 1 samples. Type: Expression profiling by high throughput sequencing.
Dynamic changes in genome-wide histone methylation and gene expression of soybean roots in response to salt stress (RNA-seq dataset)
GEO Series GSE133574. Glycine max. 6 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome dynamics during adventitious root formation in cuttings of Cryptomeria japonica D.Don
GEO Series GSE102874. Cryptomeria japonica. 72 samples. Type: Expression profiling by array.
Dynamics of gene expression in single root cells of A. thaliana
GEO Series GSE121619. Arabidopsis thaliana. 3 samples. Type: Expression profiling by high throughput sequencing.
Neuroblastoma heterogeneity and plasticity over disease progression are rooted in the dynamics of an early sympathetic transcriptional trajectory
GEO Series GSE245175. Homo sapiens. 79 samples. Type: Expression profiling by high throughput sequencing.
RNA-seq time-course analysis of the transcriptional dynamics of the two root-infecting fungi Colletotrichum tofieldiae (mutualistic) and Colletotrichum incanum (pathogenic) and their plant host Arabid
GEO Series GSE70094. Arabidopsis thaliana; Colletotrichum tofieldiae; Colletotrichum incanum. 63 samples. Type: Expression profiling by high throughput sequencing.
Data from: Fine root dynamics in lodgepole pine and white spruce stands along productivity gradients in reclaimed oil sands sites
Open-pit mining activities in the oil sands region of Alberta, Canada, create disturbed lands that, by law, must be reclaimed to a land capability equivalent to that existed before the disturbance. Re-establishment of forest cover will be affected by the production and turnover rate of fine roots. However, the relationship between fine root dynamics and tree growth has not been studied in reclaimed oil sands sites. Fine root properties (root length density, mean surface area, total root biomass, and rates of root production, turnover, and decomposition) were assessed from May to October 2011 and 2012 using sequential coring and ingrowth core methods in lodgepole pine (Pinus contorta Dougl.) and white spruce (Picea glauca (Moench.) Voss) stands. The pine and spruce stands were planted on peat mineral soil mix placed over tailings sand and overburden substrates, respectively, in reclaimed oil sands sites in Alberta. We selected stands that form a productivity gradient (low, medium, and high productivities) of each tree species based on differences in tree height and diameter at breast height (DBH) increments. In lodgepole pine stands, fine root length density and fine root production, and turnover rates were in the order of high > medium > low productivity sites and were positively correlated with tree height and DBH and negatively correlated with soil salinity (P < 0.05). In white spruce stands, fine root surface area was the only parameter that increased along the productivity gradient and was negatively correlated with soil compaction. In conclusion, fine root dynamics along the stand productivity gradients were closely linked to stand productivity and were affected by limiting soil properties related to the specific substrate used for reconstructing the reclaimed soil. Understanding the impact of soil properties on fine root dynamics and overall stand productivity will help improve land reclamation outcomes.
Aortic Valve Dynamics During Exercise After Valve Sparing Root Replacement Surgery
ClinicalTrials.gov study NCT04205474. IPD Sharing: NO. Countries: 1. Publications: 0.
Evaluation of Post Operative Pain After Ultrasonic Activation and Manual Dynamic Agitation As Final Irrigation Protocols During Root Canal Treatment
ClinicalTrials.gov study NCT05852444. IPD Sharing: Not stated. Countries: 1. Publications: 0.
A dynamic pattern of local auxin sources is required for root regeneration
GEO Series GSE145488. Arabidopsis thaliana. 18 samples. Type: Expression profiling by high throughput sequencing.
Data from: Fine root dynamics in lodgepole pine and white spruce stands along productivity gradients in reclaimed oil sands sites
Open the record for dataset details and reuse information.
DNA methylation dynamics play crucial roles in shaping the distinct transcriptomic profiles for different root-type initiation in rice
GEO Series GSE283466. Oryza sativa Japonica Group. 16 samples. Type: Methylation profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Dynamic changes in genome-wide histone methylation and gene expression of soybean roots in response to salt stress (ChIP-seq dataset)
GEO Series GSE133573. Glycine max. 10 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Dynamic changes in genome-wide histone methylation and gene expression of soybean roots in response to salt stress
GEO Series GSE133575. Glycine max. 16 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Transcriptome dynamics of Arabidopsis thaliana root penetration by the oomycete pathogen Phytophthora parasitica
GEO Series GSE51252. Phytophthora nicotianae; Phytophthora nicotianae INRA-310. 14 samples. Type: Expression profiling by array.
Dynamic network biomarker analysis discovers IbNAC083 in initiation and regulation of sweet potato root tuberization
GEO Series GSE172378. Ipomoea batatas. 28 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.