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ShareScore release 0.9.0
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42 results for “scripts and code”
Chesapeake Bay Model, Multi-River and Coastal Ocean tracer, CODE, Input Files, Scripts
<p>These data supplement the article: Du, J. and J. Shen, Transport of riverine material from multiple rivers in the Chesapeake Bay: the important control from the estuarine circulation. under review at the Journal Of Geophysical Research: Biogeoscience</p> <p>contact: Jiabi Du, jiabi@vims.edu</p> <p>Below are descriptions of the data files included here:</p> <p>1. CODE.zip</p> <p>-EFDC code for Chesapeake Bay Model</p> <p>- both hydro model and tracer release model are included</p> <p>- hydro model is run separately for each year. The first year is used to spin up and not be used for further analysis. e.g, run 2000 start the mode run from 1999,1,1 and only hydrodynamics field in 2000 is saved. </p> <p>2. Model run input files.zip:</p> <p>-input files for model runs from 1984-2014</p> <p>3. Monthly mean tracer output [1985-2014]</p> <p>-netCDF format results for monthly mean tracer concentrations from different sources (Susquehanna, Potomac, Rappahannock, York, James Rivers, and Coastal Ocean)</p> <p>-grid information are also included</p> <p>4. Matlab Scripts For Plotting.zip:</p> <p>-Matlab scripts used to plot the horizontal map, the vertical profile for the along channel section, the vertical profile for cross-channel sections. The script enables users to define the period and section no to plot. </p> <p>5. tracer influx and outflux ratio at 9 cross-section.xls:</p> <p>-an excel file contains the bottom tracer influx ratio and surface tracer outflux ratio for different rivers at different sections. </p>
Observational data, run scripts, and EAMv1 code for MICRE and ENA publications
<p>Run scripts and EAMv1 code for MICRE and ENA publications</p>
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.