Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
217
datasets available to search
ShareScore release 0.9.0
Dataset results
217 results for “single cell multiomics”
Droplet-based high-throughput 3D genome structure mapping of single cells with simultaneous transcriptomics (dscHi-C multiome)
GEO Series GSE285233. Mus musculus. 6 samples. Type: Other.
A single-cell multiomics atlas of rice organs
GEO Series GSE232863. Oryza sativa. 44 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
SCENIC+: identification of enhancers and gene regulatory networks using single-cell multiomics
GEO Series GSE210749. Mus musculus; Homo sapiens; Drosophila melanogaster. 13 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single-cell multiomic analysis reveals deviations following oocyte maturation in vitro
GEO Series GSE291722. Bos taurus. 134 samples. Type: Methylation profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Single-cell multiomics profiling reveals heterogeneous transcriptional programs and microenvironment in Desmoplastic Small Round Cell Tumors [snMultiome]
GEO Series GSE263522. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Context-aware single-cell multiomics approach identifies cell-type specific lung cancer susceptibility genes
GEO Series GSE241468. Homo sapiens. 32 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Integrated single-cell multiomics uncovers foundational regulatory mechanisms of lens development and pathology [Multiome snRNA/snATAC]
GEO Series GSE236903. Gallus gallus. 4 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single cell 10X Genomics Multiome Analysis of H3.3K4M Mutant Brain Samples
GEO Series GSE293881. Mus musculus. 32 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single-cell dissection of multiomics changes and epigenetic regulations in human high-grade serous ovarian cancer
GEO Series GSE189955. Homo sapiens. 20 samples. Type: Expression profiling by high throughput sequencing.
Integrated single-cell multiome analysis resolves muscle fiber-type gene regulatory circuitry modulated by endurance exercise
GEO Series GSE240061. Homo sapiens. 40 samples. Type: Expression profiling by high throughput sequencing.
Single Cell Multiome Atlas of the Human Fetal Retina
GEO Series GSE268630. Homo sapiens. 50 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Novel integrated multiomics analysis reveals Itgbl1-mediated regulation of fibrogenesis through antagonism of Tgfβ1 and IL1β signaling. (single cell RNA-Seq)
GEO Series GSE234269. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Single nuclei multiomics of human stem cell-derived islets identifies deficiencies in lineage specification
GEO Series GSE199636. Homo sapiens. 36 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
single-nuclear level mRNA and ATAC multiome sequencing of enriched retinal ganglion cells from postnatal day 42 mouse
GEO Series GSE248868. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single-Cell Multiomic Atlas of Human Cortical Development in Down Syndrome - Fetal Cortex Bulk RNA-seq Dataset
GEO Series GSE305139. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
In vivo interaction screening reveals liver-derived constraints to metastasis [Single Cell Multiome ATAC + Gene Expression]
GEO Series GSE267982. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single-Cell Multiomic Atlas of Human Cortical Development in Down Syndrome - Fetal Cortex Multiome Dataset
GEO Series GSE305146. Homo sapiens. 92 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single cell RNA-seq analysis of H3.3K4M WT and Hom brain samples (10X Genomics Multiome)
GEO Series GSE293751. Mus musculus. 16 samples. Type: Expression profiling by high throughput sequencing.
Liver single-nucleus multiome profiling reveals cell-type mechanisms for cardiometabolic traits
GEO Series GSE296875. Homo sapiens. 16 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Improving stem cell-derived pancreatic islets using single-cell multiome-inferred regulomes [SC-islet scRNA-seq]
GEO Series GSE202497. Homo sapiens. 5 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.