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80
datasets available to search
ShareScore release 0.9.0
Dataset results
80 results for “single-cell ATAC-seq”
Single-cell ATAC-Seq of recurrent pediatric high-grade glioma
GEO Series GSE163656. Homo sapiens. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-cell ATAC-Seq of pediatric high-grade glioma
GEO Series GSE163655. Homo sapiens. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Enhancing single-cell ATAC sequencing with formaldehyde fixation, cryopreservation, and multiplexing for flexible analysis [ATAC-seq]
GEO Series GSE281808. Homo sapiens. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-cell transcriptomic analysis of tissue resident memory T cells in human lung cancer [ATAC-Seq]
GEO Series GSE125858. Homo sapiens. 9 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-cell RNA-seq Reveals a Developmental Hierarchy and Oncogenic Networks for Initiation of Medulloblastoma [ATAC-Seq]
GEO Series GSE120967. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Chromatin mapping and single-cell immune profiling defines the temporal dynamics of ibrutinib drug response in chronic lymphocytic leukemia [ATAC-seq]
GEO Series GSE111013. Homo sapiens. 176 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-cell epigenome analysis identifies transcriptional events controlling direct conversion of human fibroblasts to pancreatic ductal-like cells [ATAC-seq]
GEO Series GSE216855. Homo sapiens. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Comparative single-cell analyses identify shared and divergent features of human and mouse kidney development [human ATAC-seq]
GEO Series GSE232478. Homo sapiens. 9 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-cell RNA-sequencing reveals an intratumor heterogeneity in pancreatic adenocarcinoma [ATAC-seq]
GEO Series GSE191203. Homo sapiens. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-cell RNA-seq and ATAC-seq of zebrafish retina
GEO Series GSE150839. Danio rerio. 2 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Bioinformatics and single-cell CRISPRi-based screen reveals effector genes and implicates multi-tissue etiology for BMD [ATAC-seq]
GEO Series GSE261280. Homo sapiens. 31 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Integrative Single-Cell RNA-Seq and ATAC-Seq Identifies Transcriptional and Epigenetic Blueprint Guiding Osteoclastogenic Trajectory [scRNA-seq]
GEO Series GSE288653. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
An integrative single-cell multiomics profiling of human pancreatic islets identifies T1D associated genes, regulatory regions, and single nucleotide polymorphism [ATAC-seq]
GEO Series GSE233474. Homo sapiens. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
scNanoATAC-seq: Long-read Single-cell ATAC-seq by Oxford Nanopore Technologies Sequencing [DATASet2: bulkATAC-seq]
GEO Series GSE194023. Mus musculus; Homo sapiens. 10 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Parallel Bimodal Single-cell Sequencing of Transcriptome and Chromatin Accessibility (Human single cell ATAC-seq)
GEO Series GSE113414. Homo sapiens. 384 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-cell analysis of bidirectional reprogramming between early embryonic states reveals mechanisms of differential lineage plasticities [ATAC-Seq]
GEO Series GSE266452. Mus musculus. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
A branching model of lineage differentiation underpinning the neurogenic potential of enteric glia (Single-cell ATAC-seq data for enteric glial cells)
GEO Series GSE239305. Mus musculus. 1 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-cell ATAC-Seq and RNa-seq of human and mouse basal cell carcinoma (BCC)
GEO Series GSE186184. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single-cell omics analysis reveals functional diversification of hepatocytes during liver regeneration [ATAC-Seq]
GEO Series GSE158865. Mus musculus. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Sensitive dissection of a genomic regulatory landscape using bulk and targeted single-cell activation [ATAC-seq]
GEO Series GSE274254. Homo sapiens. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.