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141 results for “species density”
Data for: Distance and density dependence in two native Bornean dipterocarp species
<p>The Janzen-Connell hypothesis proposes that density and distance-dependent mortality generated by specialist natural enemies prevent competitive dominance. Much literature on Janzen Connell mechanisms comes from the neotropics, and evidence of the role of distance and density-dependence is still relatively sparse. We tested the predictions of the J-C hypothesis in a South-East Asian system dominated by mast fruiting species. We hypothesized that seedling survival would decrease with distance and density, seedling growth would increase, and herbivory would decrease, according to the predictions of the Janzen-Connell hypothesis. Experiments were conducted to determine the strength of the Janzen Connell mechanism by manipulating the density and identity of tree species as a function of the distance from parent trees. Survival of conspecific seedlings was reduced near adult trees of one species, but not another. High densities of seedlings decreased the growth of conspecific seedlings of both species. In both species, herbivory rates decreased with distance in low-density areas. This study indicates that dipterocarp species experienced weak Janzen-Connell effects of distance and density dependence at the growth stage studied. Future studies in this system might focus on earlier life-history stages such as seeds and small seedlings, as well as studying mortality during mast-seeding events.</p>
Effects of density on the strength of sexual selection in the lab and in nature in an undescribed amphipod species
<p class="Body">There is a growing effort to understand how sexual selection varies over space and time under different ecological conditions and how this can maintain variation in sexual traits. An interesting ecological condition is population density, which can either increase or decrease sexual selection depending on the natural history of the species. We examined sexual and natural selection in an undescribed amphipod species (<em>Hyalella</em> sp.) using surveys of two natural populations that increase in density from spring to summer. We also conducted an experiment that directly manipulated density to assess the effects on sexual selection. In the field during spring (low density) and summer (high density), we documented sexual selection on male traits, including body size, gnathopods, and antennae. We discovered the magnitude and direction of this selection changed from spring to summer and selection patterns differed between populations. In the experiment, we found no sexual selection occurred at low density, but significant positive selection on all three male traits at medium and high densities. These results underscore the importance of isolating individual ecological factors to determine their role in sexual selection while also documenting patterns in natural populations to understand how selection varies over space and time.</p>
Effects of tree species diversity and conspecific seedling density on insect herbivory and pathogen infection on big-leaf mahogany seedlings
<p>The Janzen-Connell Hypothesis (JCH) predicts that attack by specialist enemies on seedlings increases with conspecific seedling density, but studies have rarely experimentally tested for the contingency of such effects on tree community context (e.g., diversity, composition) and measured responses by different enemies (e.g. herbivores, pathogens). We conducted a field study in a large-scale system evaluating tree species diversity and conspecific density effects on leaf damage on mahogany (<em>Swietenia macrophylla</em>) seedlings. We established quadrats of eight levels of seedling density across mahogany tree monocultures and species polycultures including mahogany, and recorded percent leaf damage by insects and percent leaf necrosis by a pathogenic fungus on mahogany seedlings. We found contrasting effects of tree species diversity on insects and pathogens. Whereas diversity did not affect leaf damage by insects, it had a significant negative effect on leaf necrosis by pathogens. On average, percent leaf necrosis on mahogany seedlings in polyculture was half of that observed in monoculture. We discuss the potential influences of changes in mahogany tree density vs. frequency (relative to other tree species) driving this diversity effect. Unexpectedly, we found no effect of seedling conspecific density on either leaf insect or pathogen damage (i.e., density-independent attack). Likewise, we found no significant tree diversity by seedling density interaction, indicating that attackers were consistently unresponsive to variation in seedling density across two levels of tree diversity. Overall, this study provides a unique test of the JCH by experimentally evaluating seedling density and tree diversity effects on contrasting plant enemies, shedding light on enemy controls over plant recruitment.</p>
Data for "Negative density dependence promotes persistence of a globally rare yet locally abundant plant species (Oenoethera coloradensis)"
<p>This dataset was used to perform the analyses in the manuscript "Negative density dependence promotes persistence of a globally rare yet locally abundant plant species (Oenoethera coloradensis)"</p>
Effects of density on the strength of sexual selection in the lab and in nature in an undescribed amphipod species
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Insect root feeders incur negative density-dependent damage across plant species in an alpine meadow
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Data and R scripts for: Ant invasions is associated with lower root density and different root distribution of a foundational savanna tree species
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Species traits mediate environmental responses but not conspecific density dependence in tropical tree saplings
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Data for: Distance and density dependence in two native Bornean dipterocarp species
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Standing herbivory is not affected by tree sex or conspecific density in a dioecious understory tropical tree species
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Data from: Interspecific variation in conspecific negative density dependence can make species less likely to coexist
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Data from: Territory size but not territorial defence varies with habitat quality and competitor density in a farming species
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Data from: Intraspecific variation mediates density dependence in a genetically diverse plant species
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Turning summer into winter: nutrient dynamics, temperature, density dependence, and invasive species drive bioenergetic processes and growth of a keystone coldwater fish
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Data from: The arboreal ants of a Neotropical rainforest show high species density and comprise one third of the ant fauna
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Community trait variation drives selection on species diversity through feedback with predator density
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Elucidating the association of trichome and stomatal densities across species
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Data from: Genetic sampling for estimating density of common species
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Seasonal density-dependence can select for partial migrants in migratory species
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Wood density and leaf size jointly predict woody plant growth rates across (but not within) species along a steep precipitation gradient
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.