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981 results for “Alienates”
FIGURES 24–27 in The amathiiform Ctenostomata (phylum Bryozoa) of New Zealand — including four new species, two of them of probable alien origin
FIGURES 24–27, Amathia wilsoni Kirkpatrick, 1888. 24, general appearance of colony, from NIWA Stn Z9689, 34.324° S, 172.826° E, 63 m depth, Three Kings Islands, North Island; 25, close-up of specimen 99.7.4345 (on slide), Busk Collection, Natural History Museum, London, from Lyall Bay, Wellington, showing disposition of autozooidal clusters and terminal kenozooidal stolon segments. 26, 27, Bowerbankia citrina (Hincks, 1877) sensu lato, from Porirua Harbour, North Island.
FIGURES 4–8. Amathia similis n in The amathiiform Ctenostomata (phylum Bryozoa) of New Zealand — including four new species, two of them of probable alien origin
FIGURES 4–8. Amathia similis n. sp. 4, holotype colony from Opua marina, Bay of Islands, North Islands; 5, close-up of branches with tightly spiralled clusters of autozooids; 6, autozooid clusters on stolons; 7, branch bifurcation; 8, autozooid cluster, with position of stolon septum arrowed.
FIGURES 19–23. Amathia zealandica n in The amathiiform Ctenostomata (phylum Bryozoa) of New Zealand — including four new species, two of them of probable alien origin
FIGURES 19–23. Amathia zealandica n. sp. 19, colony from NIWA Stn TAN1108/213, E of East Cape, North Island; 20, close-up of same showing straight clusters of autozoids on the stolon segments; 21, same, branch bifurcations and autozooidal clusters. 22, 23, Amathia bicornis (Tenison-Woods, 1877) from Makara Beach, west coast, Wellington region, North Island, showing autozooidal spirals with cuticularisation of autozooids and distal 'horns'.
Supplementary material 1 from: Leonhardt F, Arranz Aveces C, Müller A, Angin B, Jegu M, Haynes P, Ernst R (2022) Low genetic diversity in a widespread whistling alien: A comparison of Eleutherodactylus johnstonei Barbour, 1914 (Eleutherodactylidae) and congeners in native and introduced ranges. NeoBiota 79: 31-50. https://doi.org/10.3897/neobiota.79.86778
Detailed information on all populations of the three congeneric taxa used in the molecular data sets of this study
Supplementary material 1 from: Demetriou J, Kakiopoulos G, Háva J, Martinou AF, Delobel A (2022) First record of the alien seed beetle Stator limbatus (Coleoptera, Chrysomelidae, Bruchinae) from Cyprus. Travaux du Muséum National d'Histoire Naturelle "Grigore Antipa" 65(1): 37-43. https://doi.org/10.3897/travaux.65.e81350
Supplementary material 1 from: Demetriou J, Kakiopoulos G, Háva J, Martinou AF, Delobel A (2022) First record of the alien seed beetle Stator limbatus (Coleoptera, Chrysomelidae, Bruchinae) from Cyprus. Travaux du Muséum National d'Histoire Naturelle "Grigore Antipa" 65(1): 37-43. https://doi.org/10.3897/travaux.65.e81350
Data set from: Phylogenetic structure of alien plant species pools from European donor habitats
<p><strong>Aim.</strong> Many plant species native to Europe have naturalized worldwide. We tested whether the phylogenetic structure of the species pools of European habitats is related to the proportion of species from each habitat that have naturalized outside Europe (habitat's donor role) and whether the donated species are more phylogenetically related to each other than expected by chance.</p> <p><strong>Location. </strong>Europe (native range), the rest of the World (invaded range).</p> <p><strong>Time period.</strong> Last c. 100 years.</p> <p><strong>Major taxa studied. </strong>Angiospermae.</p> <p><strong>Methods. </strong>We selected<strong> </strong>33 habitats in Europe and analyzed their species pools, including 9,636 plant species, of which 2,293 have naturalized outside Europe. We assessed the phylogenetic structure of each habitat as the difference between the observed and expected mean pairwise phylogenetic distance (MPD) for (a) the whole species pool and (b) subgroups of species that have naturalized outside Europe and those that have not. We used generalized linear models to test for the effects of the phylogenetic structure and the level of human influence on the habitats' donor role.</p> <p><strong>Results. </strong>Habitats strongly to moderately influenced by humans often showed phylogenetically clustered species pools. Within the clustered species pools, those species that have naturalized outside Europe showed a random phylogenetic structure. Species pools of less human-influenced natural habitats varied from phylogenetically clustered to overdispersed, with donated naturalized species also often showing random patterns within the species pools. Donor roles in both habitat groups increased with increasing MPD within habitats.</p> <p><strong>Main conclusions. </strong>European h<span>uman-influenced habitats donate closely related species that </span>often naturalize in disturbed habitats outside their native range. <span>Natural habitats donate species from different lineages with various ecological strategies that allow them to succeed in different habitats in the invaded range</span>. However, in most cases, the naturalized species donated are phylogenetically random subsets of the donor habitats' species pools.</p> <p><strong>Aim.</strong> Many plant species native to Europe have naturalized worldwide. We tested whether the phylogenetic structure of the species pools of European habitats is related to the proportion of species from each habitat that have naturalized outside Europe (habitat's donor role) and whether the donated species are more phylogenetically related to each other than expected by chance.</p> <p><strong>Location. </strong>Europe (native range), the rest of the World (invaded range).</p> <p><strong>Time period.</strong> Last c. 100 years.</p> <p><strong>Major taxa studied. </strong>Angiospermae.</p> <p><strong>Methods. </strong>We selected<strong> </strong>33 habitats in Europe and analyzed their species pools, including 9,636 plant species, of which 2,293 have naturalized outside Europe. We assessed the phylogenetic structure of each habitat as the difference between the observed and expected mean pairwise phylogenetic distance (MPD) for (a) the whole species pool and (b) subgroups of species that have naturalized outside Europe and those that have not. We used generalized linear models to test for the effects of the phylogenetic structure and the level of human influence on the habitats' donor role.</p> <p><strong>Results. </strong>Habitats strongly to moderately influenced by humans often showed phylogenetically clustered species pools. Within the clustered species pools, those species that have naturalized outside Europe showed a random phylogenetic structure. Species pools of less human-influenced natural habitats varied from phylogenetically clustered to overdispersed, with donated naturalized species also often showing random patterns within the species pools. Donor roles in both habitat groups increased with increasing MPD within habitats.</p> <p><strong>Main conclusions. </strong>European h<span>uman-influenced habitats donate closely related species that </span>often naturalize in disturbed habitats outside their native range. <span>Natural habitats donate species from different lineages with various ecological strategies that allow them to succeed in different habitats in the invaded range</span>. However, in most cases, the naturalized species donated are phylogenetically random subsets of the donor habitats' species pools.</p>
Invasive alien species in Campos Sulinos: current status and future trends
<p>This file belongs to the Electronic supplemental material "Table S1. Researchers who contributed to records of occurrences of species from SISBIO data.".</p>
Future climate change accelerates the invasive rhythm of alien marine species: new insights into the invasive potential of the world's aquaculture species red drum Sciaenops ocellatus
<p>This article accompanies the article "<strong>Integrating species distribution modeling, stable isotope and transcriptomic analysis provides insights into eco-position competition for alien red drum <em>Sciaenops ocellatus</em></strong>". The file contains supplementary material to the article.</p>
Supplementary material 7 from: Muller E, Dvořák M, Marçais B, Caeiro E, Clot B, Desprez-Loustau M-L, Gedda B, Lundén K, Migliorini D, Oliver G, Ramos AP, Rigling D, Rybníček O, Santini A, Schneider S, Stenlid J, Tedeschini E, Aguayo J, Gomez-Gallego M (2023) Conditions of emergence of the Sooty Bark Disease and aerobiology of Cryptostroma corticale in Europe. In: Jactel H, Orazio C, Robinet C, Douma JC, Santini A, Battisti A, Branco M, Seehausen L, Kenis M (Eds) Conceptual and technical innovations to better manage invasions of alien pests and pathogens in forests. NeoBiota 84: 319-347. https://doi.org/10.3897/neobiota.84.90549
Coefficient estimate for each variable of maple basal area computed for different radius and their 95% credible intervals in brackets for models predicting the number of spores detected per week
Supplementary material 3 from: Muller E, Dvořák M, Marçais B, Caeiro E, Clot B, Desprez-Loustau M-L, Gedda B, Lundén K, Migliorini D, Oliver G, Ramos AP, Rigling D, Rybníček O, Santini A, Schneider S, Stenlid J, Tedeschini E, Aguayo J, Gomez-Gallego M (2023) Conditions of emergence of the Sooty Bark Disease and aerobiology of Cryptostroma corticale in Europe. In: Jactel H, Orazio C, Robinet C, Douma JC, Santini A, Battisti A, Branco M, Seehausen L, Kenis M (Eds) Conceptual and technical innovations to better manage invasions of alien pests and pathogens in forests. NeoBiota 84: 319-347. https://doi.org/10.3897/neobiota.84.90549
Standard curve and its correlation coefficient to determine the limit of detection for the real-time PCR assay in ten-folded DNA solutions of C. corticale mycelium (a) and total number of spores in the qPCR reaction (b)
Supplementary material 5 from: Muller E, Dvořák M, Marçais B, Caeiro E, Clot B, Desprez-Loustau M-L, Gedda B, Lundén K, Migliorini D, Oliver G, Ramos AP, Rigling D, Rybníček O, Santini A, Schneider S, Stenlid J, Tedeschini E, Aguayo J, Gomez-Gallego M (2023) Conditions of emergence of the Sooty Bark Disease and aerobiology of Cryptostroma corticale in Europe. In: Jactel H, Orazio C, Robinet C, Douma JC, Santini A, Battisti A, Branco M, Seehausen L, Kenis M (Eds) Conceptual and technical innovations to better manage invasions of alien pests and pathogens in forests. NeoBiota 84: 319-347. https://doi.org/10.3897/neobiota.84.90549
Zero-centred histogram of the residuals between simulated data and predictions of the model with the distance to the closest disease report as a predictor of the number of Cryptostroma corticale spores detected in aerobiological samples
Supplementary material 2 from: Brockerhoff EG, Gresham BA, Meurisse N, Nahrung HF, Perret-Gentil A, Pugh AR, Sopow SL, Turner RM (2023) Pining away and at home: global utilisation of Pinus radiata by native and non-native insects. In: Jactel H, Orazio C, Robinet C, Douma JC, Santini A, Battisti A, Branco M, Seehausen L, Kenis M (Eds) Conceptual and technical innovations to better manage invasions of alien pests and pathogens in forests. NeoBiota 84: 137-167. https://doi.org/10.3897/neobiota.84.95864
Statistics for Table 2. Statistical tests of proportions out of all species among feeding types for impacts, establishments and interceptions.
Supplementary material 3 from: Brockerhoff EG, Gresham BA, Meurisse N, Nahrung HF, Perret-Gentil A, Pugh AR, Sopow SL, Turner RM (2023) Pining away and at home: global utilisation of Pinus radiata by native and non-native insects. In: Jactel H, Orazio C, Robinet C, Douma JC, Santini A, Battisti A, Branco M, Seehausen L, Kenis M (Eds) Conceptual and technical innovations to better manage invasions of alien pests and pathogens in forests. NeoBiota 84: 137-167. https://doi.org/10.3897/neobiota.84.95864
Numbers (and percentages) of species by impact class, and whether or not they have been intercepted (based on the international interceptions dataset covering the period 1995–2021) or established in a region outside their native range.
Supplementary material 4 from: Muller E, Dvořák M, Marçais B, Caeiro E, Clot B, Desprez-Loustau M-L, Gedda B, Lundén K, Migliorini D, Oliver G, Ramos AP, Rigling D, Rybníček O, Santini A, Schneider S, Stenlid J, Tedeschini E, Aguayo J, Gomez-Gallego M (2023) Conditions of emergence of the Sooty Bark Disease and aerobiology of Cryptostroma corticale in Europe. In: Jactel H, Orazio C, Robinet C, Douma JC, Santini A, Battisti A, Branco M, Seehausen L, Kenis M (Eds) Conceptual and technical innovations to better manage invasions of alien pests and pathogens in forests. NeoBiota 84: 319-347. https://doi.org/10.3897/neobiota.84.90549
Zero-centred histogram of the residuals between simulated data and predictions of the model with the water balance (P-ETP) in the vegetative season (April-August) of the year preceding disease report as a predictor of the standardized record rate of the SBD
Supplementary material 4 from: Brockerhoff EG, Gresham BA, Meurisse N, Nahrung HF, Perret-Gentil A, Pugh AR, Sopow SL, Turner RM (2023) Pining away and at home: global utilisation of Pinus radiata by native and non-native insects. In: Jactel H, Orazio C, Robinet C, Douma JC, Santini A, Battisti A, Branco M, Seehausen L, Kenis M (Eds) Conceptual and technical innovations to better manage invasions of alien pests and pathogens in forests. NeoBiota 84: 137-167. https://doi.org/10.3897/neobiota.84.95864
Percentages of species native to a region in each feeding guild, regardless of impact. Those in the "Native country: other" category are species native to other regions but not to Australia or New Zealand.
Supplementary material 6 from: Muller E, Dvořák M, Marçais B, Caeiro E, Clot B, Desprez-Loustau M-L, Gedda B, Lundén K, Migliorini D, Oliver G, Ramos AP, Rigling D, Rybníček O, Santini A, Schneider S, Stenlid J, Tedeschini E, Aguayo J, Gomez-Gallego M (2023) Conditions of emergence of the Sooty Bark Disease and aerobiology of Cryptostroma corticale in Europe. In: Jactel H, Orazio C, Robinet C, Douma JC, Santini A, Battisti A, Branco M, Seehausen L, Kenis M (Eds) Conceptual and technical innovations to better manage invasions of alien pests and pathogens in forests. NeoBiota 84: 319-347. https://doi.org/10.3897/neobiota.84.90549
Zero-centred histogram of the residuals between simulated data and predictions of the model with the total sycamore maple basal area in a radius of 50 km from the sampler as a predictor of the number of Cryptostroma corticale spores detected in aerobiological samples
Supplementary material 2 from: Colombari F, Battisti A (2023) Citizen science at school increases awareness of biological invasions and contributes to the detection of exotic ambrosia beetles. In: Jactel H, Orazio C, Robinet C, Douma JC, Santini A, Battisti A, Branco M, Seehausen L, Kenis M (Eds) Conceptual and technical innovations to better manage invasions of alien pests and pathogens in forests. NeoBiota 84: 211-229. https://doi.org/10.3897/neobiota.84.95177
Slides of the lecture on 'Monitoring of insect species harmful to trees and forests' and link to educational videos
Supplementary material 2 from: Muller E, Dvořák M, Marçais B, Caeiro E, Clot B, Desprez-Loustau M-L, Gedda B, Lundén K, Migliorini D, Oliver G, Ramos AP, Rigling D, Rybníček O, Santini A, Schneider S, Stenlid J, Tedeschini E, Aguayo J, Gomez-Gallego M (2023) Conditions of emergence of the Sooty Bark Disease and aerobiology of Cryptostroma corticale in Europe. In: Jactel H, Orazio C, Robinet C, Douma JC, Santini A, Battisti A, Branco M, Seehausen L, Kenis M (Eds) Conceptual and technical innovations to better manage invasions of alien pests and pathogens in forests. NeoBiota 84: 319-347. https://doi.org/10.3897/neobiota.84.90549
Isolates which DNA was extracted and used to confirm the specificity of the primers ccITS2F and SBD3R and probe SBD5P
Supplementary material 8 from: Muller E, Dvořák M, Marçais B, Caeiro E, Clot B, Desprez-Loustau M-L, Gedda B, Lundén K, Migliorini D, Oliver G, Ramos AP, Rigling D, Rybníček O, Santini A, Schneider S, Stenlid J, Tedeschini E, Aguayo J, Gomez-Gallego M (2023) Conditions of emergence of the Sooty Bark Disease and aerobiology of Cryptostroma corticale in Europe. In: Jactel H, Orazio C, Robinet C, Douma JC, Santini A, Battisti A, Branco M, Seehausen L, Kenis M (Eds) Conceptual and technical innovations to better manage invasions of alien pests and pathogens in forests. NeoBiota 84: 319-347. https://doi.org/10.3897/neobiota.84.90549
Probability of disease report in an area of 40-km to 130-km radius from the sampler as a function of the number of detected spores per day
An annotated list of horizon scanned technologies with potential for application in alien species citizen science projects
<p><strong>Context</strong></p> <p>The contribution of volunteers in recording invasive alien species (IAS) has been fostered by technological developments such as social media, apps, low-cost sensors, search engines and predictive analytics. These technology developments, an increased attention to citizen science and a cultural change towards collaboration and openness in research within the policy agenda should increase the contribution of volunteer recording. Within the framework of the COST Action CA17122 <a href="https://www.ceh.ac.uk/our-science/projects/alien-csi"><em>Increasing Understanding of Alien Species through Citizen Science</em></a> (<a href="https://doi.org/10.3897/rio.4.e31412">Roy et al. 2018</a>) a group of researchers explored the value of emerging technologies for citizen science in the context of alien species, recognizing the contribution of volunteers and reviewing their potential to engage broad audiences, motivate volunteers, improve data collection, increase data quality etc.</p> <p><strong>Survey</strong></p> <p>The following criteria were then used to evaluate the potential of these technologies for alien species citizen science through a dedicated <a href="https://forms.gle/9GQJctnAbPLKyxDE7">survey</a>:</p> <p>● <em><strong>Audience</strong></em>: the technology can attract new target audiences for IAS citizen science and/or support more inclusivity in IAS citizen science (can overcome inequalities in participation, attract under-privileged audiences/those underrepresented in the scientific enterprise, allow participation of sensory/cognitive/otherwise impaired...)<br> ● <em><strong>Engagement </strong></em>with others: the technology supports better connections with other participants, helpful in building a community<br> ● <em><strong>Engagement via feedback</strong></em>: the technology increases the quality, amount or rate of feedback (including supporting learning) to participants<br> ● <strong><em>Application</em></strong>: the technology can be embedded in everyday life and therefore has the potential for wide, generic application</p> <p>● <em><strong>New data</strong></em>: the technology yields new types of data that would not be available without the technology (improved the detectability of IAS, new types of data, species interactions, new information sources)<br> ● <strong><em>Extends data</em></strong>: the technology expands the scope of data collection or analysis (e.g. better coverage spatially, temporally)<br> ● <strong><em>Improves data quality</em></strong>: the technology improves species ID, reduces uncertainty, improves validation<br> ● <strong><em>Improves the flow of data</em></strong>: the technology increases the speed of record transmission (e.g. for early warning)<br> ● <strong><em>Improves the curation of data</em></strong>: the technology itself allows for improved data curation (better metadata, sustainability and long term preservation data, open data, tracked provenance of data, FAIR data management, enable to better credit citizen scientists for their data contributions)</p> <p><strong>Dataset description</strong></p> <p>This dataset represents the list of technologies (in the broadest sense, including approaches) that were identified collectively by the experts as being relevant technologies in the framework of (alien species) citizen science. The dataset includes the following fields:</p> <ul> <li><em>Name</em>: name of the approach/technology</li> <li><em>Category</em>: broad categorisation of the approach/technology (Hardware and infrastructure, data collection and analysis tools, tools to improve user experience). If some approaches are combinations this is mentioned in description.</li> <li><em>Description</em>: a definition and/or description of the approach/technology</li> <li><em>Reference</em>: a reference on the approach/technology (e.g. paper, online reference), mostly with a doi</li> <li><em>Example</em>: an example of the approach/technology, mostly with reference to an (alien species) citizen science project that applied it</li> <li><em>Notes: </em>any further remarks</li> </ul>
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.