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Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
2,063
datasets available to search
ShareScore release 0.9.0
Dataset results
2,063 results for “single cell transcriptomics”
Engineering a Niche Supporting Hematopoietic Stem Cell Development Using Integrated Single Cell Transcriptomics
GEO Series GSE145886. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomics of resected human traumatic brain injury tissues reveals acute activation of endogenous retroviruses in oligodendroglia
GEO Series GSE209552. Homo sapiens. 30 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome and cell-specific network analysis reveal the reparative effect of NT-4 supplementation in preantral follicles grown in vitro [oocyte_RNA-seq]
GEO Series GSE176516. Mus musculus. 15 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome characteristics of postnatal ILC from mice skin
GEO Series GSE214848. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Interspecific single-cell transcriptomic analysis reveals differences in signaling pathways governing gonadal primordial germ cells between chicken and zebra finch (Taeniopygia guttata) [chicken scRNA
GEO Series GSE208178. Gallus gallus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome analysis of avian neural crest migration reveals signatures of invasion and molecular transitions [bulk RNA-seq]
GEO Series GSE108199. Gallus gallus. 12 samples. Type: Expression profiling by high throughput sequencing.
Proteomic and single-cell transcriptomic dissection of human plasmacytoid dendritic cell response to influenza virus
GEO Series GSE189120. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomics reveals immune response of intestinal cell types to viral infection
GEO Series GSE171620. Homo sapiens. 19 samples. Type: Expression profiling by high throughput sequencing.
A single cell host/pathogen transcriptome atlas of the HPV16 infected epidermis identifies a novel differentiation-dissonant keratinocyte population implicated in cancer
GEO Series GSE189670. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell RNA Transcriptome of the Human Endometrium Reveals Epithelial Characterizations Associated with Recurrent Implantation Failure
GEO Series GSE223672. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
A single cell transcriptome atlas of Human thymic epithelial compartments
GEO Series GSE220830. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
The Tumor Microenvironment of Laryngeal Squamous Cell Carcinoma Revealed by Single-Cell Transcriptomics
GEO Series GSE206332. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing.
A single-cell transcriptomic atlas of the adult Drosophila ventral nerve cord
GEO Series GSE141807. Drosophila melanogaster. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell Transcriptome Profiling of the Kidney Glomerulus Identifies Key Cell Types and Reactions to Injury
GEO Series GSE146912. Mus musculus. 17 samples. Type: Expression profiling by high throughput sequencing.
Comparative transcriptomic analyses and single-cell RNA sequencing of the freshwater planarian Schmidtea mediterranea identifies major cell types and pathway conservation
GEO Series GSE115280. Schmidtea mediterranea. 1 samples. Type: Expression profiling by high throughput sequencing.
Single cell transcriptomes of developing chicken hind limbs at stages HH25, HH29 and HH31
GEO Series GSE130439. Gallus gallus. 3 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic analysis of embryonic vasculogenesis identifies the conversion of Etv2-deficient vascular progenitors into skeletal muscle
GEO Series GSE142484. Danio rerio. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic analysis of tissue resident memory T cells in human lung cancer [ 10x genomics]
GEO Series GSE111896. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomics and analysis for new molecular regulators of sleep
GEO Series GSE137665. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.
Single cell transcriptome analysis of human pancreas reveals transcriptional signatures of aging and somatic mutation patterns.
GEO Series GSE81547. Homo sapiens. 2544 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.