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1,353
datasets available to search
ShareScore release 0.9.0
Dataset results
1,353 results for “single-cell transcriptomics”
Transcriptomic and anatomic parcellation of 5-HT3AR expressing cortical interneuron subtypes revealed by single-cell RNA sequencing
GEO Series GSE90860. Mus musculus. 223 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome profiling reveals diverse immune cell populations and their responses to viral infection in the spleen of zebrafish
GEO Series GSE211396. Danio rerio. 3 samples. Type: Expression profiling by high throughput sequencing.
Joint single-cell transcriptomics and epigenomics analysis reveal key regulators of CAR T cell stemness and antitumor immunity
GEO Series GSE202543. Mus musculus. 24 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single-Cell Transcriptomics Identifies TOX as a Key Transcriptional Regulator of Progenitor-Like CD8 T Cells in Chronic Infection [RNA-seq]
GEO Series GSE119942. Mus musculus. 34 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell Transcriptome Analysis Maps the Developmental Track of the Human Heart
GEO Series GSE106118. Homo sapiens. 98 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomes combining with consecutive genomics reveal clonal evolution and gene regulatory networks in relapsed and refractory multiple myeloma
GEO Series GSE188632. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell RNA Sequencing and Spatial Transcriptomics Reveal Unique Subpopulations of Infiltrating Macrophages and Dendritic Cells Following AKI
GEO Series GSE289933. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing; Other.
Single-cell transcriptome analysis reveals CD34 as a marker of human sinoatrial node pacemaker cardiomyocytes [CITE-seq]
GEO Series GSE279632. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing; Other.
Single-cell Transcriptomics Reveals the Divergent Developmental Lineage Trajectories during Human Pituitary Development
GEO Series GSE142653. Homo sapiens. 89 samples. Type: Expression profiling by high throughput sequencing.
Parallel Bimodal Single-cell Sequencing of Transcriptome and Chromatin Accessibility (Human single cell RNA-seq blood)
GEO Series GSE123899. Homo sapiens. 480 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell Transcriptomic Profiling of Heart Reveals ANGPTL4 Linking Fibroblasts and Angiogenesis inHeart Failure with Preserved Ejection Fraction [bulk RNA-seq]
GEO Series GSE236584. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell Transcriptomics Identifies TOX as a Key Transcriptional Regulator of Progenitor-Like CD8 T Cells in Chronic Infection
GEO Series GSE119943. Mus musculus. 60 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single-cell TCR transcriptomics of thymic iNKT cells from BALB/c and Cd80/Cd86 -/- (B7KO) mice
GEO Series GSE198966. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Single-cell joint analysis of DNA oxidative damage and transcriptome [Cortex paired-damage]
GEO Series GSE268562. Mus musculus. 2 samples. Type: Other.
A single-cell transcriptomic atlas characterizes the silk-producing organ in the silkworm
GEO Series GSE193279. Bombyx mori. 3 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome profiles of wild-type and IRF8KO microglia [scRNA-seq]
GEO Series GSE231405. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomics analysis of the tumor microenvironment from murine MC38 xenografts upon SHP099 treatment
GEO Series GSE164908. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell level transcriptomic anaylsis of the homeostatic and regenerating axolotl limb
GEO Series GSE121737. Ambystoma mexicanum. 3 samples. Type: Expression profiling by high throughput sequencing.
Integrating single-cell transcriptomic data across different conditions, technologies, and species
GEO Series GSE110513. Homo sapiens. 13 samples. Type: Expression profiling by high throughput sequencing.
A single-cell transcriptome atlas of the human pancreas [CEL-seq2]
GEO Series GSE85241. Homo sapiens. 32 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.