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1,145 results for “somatic”
CTCF Functions as an Insulator for Somatic Genes and a Structural Regulator for Pluripotent Genes during Reprogramming [RNA-seq]
GEO Series GSE123641. Mus musculus. 56 samples. Type: Expression profiling by high throughput sequencing.
MicroRNA-dependent transposable element transcriptional silencing in Drosophila somatic ovarian cells [RIP-Seq]
GEO Series GSE60973. Drosophila melanogaster. 6 samples. Type: Other.
CTCF Functions as an Insulator for Somatic Genes and a Structural Regulator for Pluripotent Genes during Reprogramming [ChIP-seq]
GEO Series GSE123651. Mus musculus. 59 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Molecular profiles (somatic mutations, gene expression and DNA methylation) of multiple pattern-annotated lung adenocarcinoma tumor regions.
<p>Please refer to the methods section of the paper for more detailed explanations. In summary:</p> <ul> <li><strong>chuv_molecular_dataset_annotation.xlsx</strong>: table containing clinical information for each patient, molecular profiles available for each sample, histologic pattern annotation and driver mutations detected.</li> <li><strong>CHUV_MAF.txt</strong>: MAF file containing mutations found in each sample. Mutations were called using GATK4 pipeline and Mutect2. Filtered .vcf files were converted into maf files using vcf2maf. Annotations to patient, region and samples are reported in additional columns.</li> <li><strong>CHUV_DNAmethylation_BetaValues_ComBat.txt</strong>: DNA methylation beta values generated with minfi and batch-corrected with ComBat.</li> <li><strong>CHUV_GeneExpression_RsemExpectedCounts.txt</strong>: Gene-level expression counts computed with RSEM.</li> <li><strong>CHUV_GeneExpression_log2TPM_ComBat.txt</strong>: Gene-level expression normalized as log2(TPM+1) computed with RSEM and batch-corrected with ComBat.</li> </ul>
Data from: NF1-glioblastoma clonal profiling reveals KMT2B mutations as potential somatic oncogenic events
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Figure 1 from: Chen R, Yu Y (2016) Induced pluripotent stem (iPS) cells and somatic cardiac regeneration — An exploratory bioinformatic analysis. Research Ideas and Outcomes 2: e8801. https://doi.org/10.3897/rio.2.e8801
Figure 1 - Nucleostemin (GNL3) and iPS (SOX2-OCT4-NANOG) subcellular interaction network
Utilization of Somatic Tissue Oxygen Saturation Monitoring in Pregnant Women
ClinicalTrials.gov study NCT03196141. IPD Sharing: NO. Countries: 1. Publications: 0.
Somatic Symptom Disorders in Patients With Myocardial Bridge
ClinicalTrials.gov study NCT04664387. IPD Sharing: Not stated. Countries: 1. Publications: 0.
SMS - Study of Somatic Mutations Using Genome Sequencing
ClinicalTrials.gov study NCT06851052. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Mechanisms of Somatic Mutation and Tumor Initiation in Pre-malignant Kidney Tubule Cells
ClinicalTrials.gov study NCT06194669. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Effectiveness of Supportive Psychotherapy Through Internet-Based Teleconsultation on Psychological and Somatic Symptoms, Neutrophil-Lymphocyte Ratio, and Heart Rate Variability in Post Covid-19 Syndro
ClinicalTrials.gov study NCT05648123. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Tobacco and Alcohol Influence on Oncogenic Drivers and Somatic Evolution in the Oral Mucosa
ClinicalTrials.gov study NCT06094829. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Developing an Integrated Psychotherapy With Cognitive-behavioral Therapy and Biofeedback Therapy for Somatic Symptom Disorder
ClinicalTrials.gov study NCT05792930. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Observatory of Psychiatric Symptoms and Their Somatic Causes in Urgent Medical Care
ClinicalTrials.gov study NCT04726449. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Cognitive Behavioral Therapy for Insomnia (CBTi) in Patients With Somatic Disease
ClinicalTrials.gov study NCT04598672. IPD Sharing: NO. Countries: 1. Publications: 0.
Pacritinib in Vacuoles, E1 Ubiqutin-activating Enzyme, X-linked, Autoinflammatory, Somatic (VEXAS) Syndrome
ClinicalTrials.gov study NCT06538181. IPD Sharing: YES. Countries: 1. Publications: 0.
Prediction and Validation of Unipolar Depression With Psychosocial-somatic Markers in a Naturalistic Cohort Recruited in an Outpatient Setting
ClinicalTrials.gov study NCT05547711. IPD Sharing: YES. Countries: 1. Publications: 0.
Study of Endogenous Inhibitory Modulation During Gastric and Somatic Stimulation
ClinicalTrials.gov study NCT00693407. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Improving the Reproductive Outcome of Poor Quality Ova by Injection of Autologous Somatic Mitochondria
ClinicalTrials.gov study NCT01631578. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Prevalence of Self-reported Premenstrual Syndrome and Analysis of Somatic and Psychoemotional Symptoms
ClinicalTrials.gov study NCT04455685. IPD Sharing: Not stated. Countries: 1. Publications: 0.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.