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Figure 1 from: Oggier A, Debonneville C, Conedera M, Schumpp O, Rizzoli A (2024) First detection of 'Candidatus Phytoplasma ulmi' in Switzerland and in Orientus ishidae Matsumura, 1902. Alpine Entomology 8: 29-34. https://doi.org/10.3897/alpento.8.115588
Figure 1 Phylogenetic tree of the secY-map (A) and imp (B) genes sequences from Orientus ishidae obtained in this work and reference strains from Genbank (see Table 1). Maximum likelihood phylogeny based on nucleotide sequences of (A) map (543 bp) and (B) imp (465 bp) genes. The numbers on branches indicate the level of bootstrap support (500 replicates). Support values above 70% are labeled. The scale bar shows the number of substitutions per site.
Digital Appendix: Seismotectonics of the Rawil Depression (Western Alps, Switzerland): Revisiting Faults, Earthquakes, and Crustal Stresses [Dataset]
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Supplementary material 3 from: Ribeiro-Correia JP, Prospero S, Beenken L, Biedermann PHW, Blaser S, Branco M, Chittaro Y, Frey D, Hölling D, Kaya SO, Knížek M, Mittelstrass J, Ruffner B, Sanchez A, Brockerhoff EG (2024) Distribution of the invasive ambrosia beetle Anisandrus maiche (Coleoptera, Scolytinae) in Switzerland and first record in Europe of its ambrosia fungus Ambrosiella cleistominuta. Alpine Entomology 8: 35-49. https://doi.org/10.3897/alpento.8.117537
Photos of traps used in this study
Supplementary material 1 from: Ribeiro-Correia JP, Prospero S, Beenken L, Biedermann PHW, Blaser S, Branco M, Chittaro Y, Frey D, Hölling D, Kaya SO, Knížek M, Mittelstrass J, Ruffner B, Sanchez A, Brockerhoff EG (2024) Distribution of the invasive ambrosia beetle Anisandrus maiche (Coleoptera, Scolytinae) in Switzerland and first record in Europe of its ambrosia fungus Ambrosiella cleistominuta. Alpine Entomology 8: 35-49. https://doi.org/10.3897/alpento.8.117537
Specimens of Anisandrus maiche from Switzerland, collected by José P. Ribeiro-Correia
Supplementary material 2 from: Ribeiro-Correia JP, Prospero S, Beenken L, Biedermann PHW, Blaser S, Branco M, Chittaro Y, Frey D, Hölling D, Kaya SO, Knížek M, Mittelstrass J, Ruffner B, Sanchez A, Brockerhoff EG (2024) Distribution of the invasive ambrosia beetle Anisandrus maiche (Coleoptera, Scolytinae) in Switzerland and first record in Europe of its ambrosia fungus Ambrosiella cleistominuta. Alpine Entomology 8: 35-49. https://doi.org/10.3897/alpento.8.117537
Specimens of Anisandrus maiche from Switzerland, collected by David Frey
Figure 4 from: Ribeiro-Correia JP, Prospero S, Beenken L, Biedermann PHW, Blaser S, Branco M, Chittaro Y, Frey D, Hölling D, Kaya SO, Knížek M, Mittelstrass J, Ruffner B, Sanchez A, Brockerhoff EG (2024) Distribution of the invasive ambrosia beetle Anisandrus maiche (Coleoptera, Scolytinae) in Switzerland and first record in Europe of its ambrosia fungus Ambrosiella cleistominuta. Alpine Entomology 8: 35-49. https://doi.org/10.3897/alpento.8.117537
Figure 4 Culture of Ambrosiella cleistominuta (on 15-day old Potato Dextrose Agar, see methods) from Anisandrus maiche trapped alive in canton Ticino, Switzerland.
Figure 1 from: Ribeiro-Correia JP, Prospero S, Beenken L, Biedermann PHW, Blaser S, Branco M, Chittaro Y, Frey D, Hölling D, Kaya SO, Knížek M, Mittelstrass J, Ruffner B, Sanchez A, Brockerhoff EG (2024) Distribution of the invasive ambrosia beetle Anisandrus maiche (Coleoptera, Scolytinae) in Switzerland and first record in Europe of its ambrosia fungus Ambrosiella cleistominuta. Alpine Entomology 8: 35-49. https://doi.org/10.3897/alpento.8.117537
Figure 1 Trap locations in cantons Ticino and Grisons where Anisandrus maiche was captured (green symbols) or where no captures were recorded (grey symbols). Symbols vary by trap type (see legend and methods for details). Note that each square represents a pair of two Polytraps which were placed in close proximity to each other (Vector and raster map data https://www.swisstopo.ch).
Figure 3 from: Ribeiro-Correia JP, Prospero S, Beenken L, Biedermann PHW, Blaser S, Branco M, Chittaro Y, Frey D, Hölling D, Kaya SO, Knížek M, Mittelstrass J, Ruffner B, Sanchez A, Brockerhoff EG (2024) Distribution of the invasive ambrosia beetle Anisandrus maiche (Coleoptera, Scolytinae) in Switzerland and first record in Europe of its ambrosia fungus Ambrosiella cleistominuta. Alpine Entomology 8: 35-49. https://doi.org/10.3897/alpento.8.117537
Figure 3 Mean trap captures of Anisandrus maiche in central-upper Ticino (left, Riviera-Iragna and Serravalle-Leggiuna, N = 4 ethanol-baited bottle traps) and in central Ticino (right, Bolette, Locarno, N = 2 Polytraps).
Figure 2 from: Ribeiro-Correia JP, Prospero S, Beenken L, Biedermann PHW, Blaser S, Branco M, Chittaro Y, Frey D, Hölling D, Kaya SO, Knížek M, Mittelstrass J, Ruffner B, Sanchez A, Brockerhoff EG (2024) Distribution of the invasive ambrosia beetle Anisandrus maiche (Coleoptera, Scolytinae) in Switzerland and first record in Europe of its ambrosia fungus Ambrosiella cleistominuta. Alpine Entomology 8: 35-49. https://doi.org/10.3897/alpento.8.117537
Figure 2 Anisandrus maiche adult trapped at Serravalle-Leggiuna 1 (Ticino), dorsal and lateral. Specimen length 2.0 mm. Photos by Carl-Michael Anderson, WSL.
External validation of EPIC's Risk of Unplanned Readmission model, the LACE+ index and SQLape® as predictors of unplanned hospital readmissions: A monocentric, retrospective, diagnostic cohort study in Switzerland
<p>Introduction: Readmissions after an acute care hospitalization are relatively common, costly to the health care system, and are associated with significant burden for patients. As one way to reduce costs and simultaneously improve quality of care, hospital readmissions receive increasing interest from policy makers. It is only relatively recently that strategies were developed with the specific aim of reducing unplanned readmissions using prediction models to identify patients at risk. EPIC's Risk of Unplanned Readmission model promises superior performance. However, it has only been validated for the US setting. Therefore, the main objective of this study is to externally validate the EPIC's Risk of Unplanned Readmission model and to compare it to the internationally, widely used LACE+ index, and the SQLAPE® tool, a Swiss national quality of care indicator.</p> <p>Methods: A monocentric, retrospective, diagnostic cohort study was conducted. The study included inpatients, who were discharged between the 1<sup>st</sup> of January 2018 and the 31<sup>st</sup> of December 2019 from the Lucerne Cantonal Hospital, a tertiary-care provider in Central Switzerland. The study endpoint was an unplanned 30-day readmission. Models were replicated using the original intercept and beta coefficients as reported. Otherwise, score generator provided by the developers were used. For external validation, discrimination of the scores under investigation were assessed by calculating the area under the receiver operating characteristics curves (AUC). Calibration was assessed with the Hosmer-Lemeshow <i>X</i><sup><i>2</i></sup><span><span></span></span> goodness-of-fit test This report adheres to the TRIPOD statement for reporting of prediction models.</p> <p>Results: At least 23,116 records were included. For discrimination, the EPIC´s prediction model, the LACE+ index and the SQLape® had AUCs of 0.692 (95% CI 0.676-0.708), 0.703 (95% CI 0.687-0.719) and 0.705 (95% CI 0.690-0.720). The Hosmer-Lemeshow <i>X</i><sup><i>2</i></sup><span><span></span></span> tests had values of p<0.001.</p> <p>Conclusion: In summary, the EPIC´s model showed less favorable performance than its comparators. It may be assumed with caution that the EPIC´s model complexity has hampered its wide generalizability - model updating is warranted.</p>
Fig. 1 in Hidden in plain sight: six millipede species (Myriapoda: Diplopoda) new for the fauna of Switzerland
Fig. 1. Cylindroiulus britannicus (Verhoeff, 1891). (A) Dissected adult male from Basel-Stadt (NMB-699g). Scale bar 2 mm. (B) Gonopod of specimen from Liestal (NMB-699a) in lateral view. Scale bar 0.1 mm. Abbreviations: m, mesomerite; p, promerite; pc, lateral rim of paracoxite; s, solenomerite.
Fig. 1 in Review of the Dichotrachelus alpestris STIERLIN, 1878 species group with evidence for a species complex of D. augusti F. SOLARI, 1946, and D. sondereggeri sp. nov. from Switzerland (Coleoptera, Curculionidae)
Fig. 1: Dichotrachelus sondereggeri sp. nov., male holotype (drawing by H.-P. Wymann).
Supplementary material to "Food and habitats requirements of the Scops Owl (Otus scops) in Switzerland revealed by very high-resolution multi-scale models"
<p><strong>Abstract</strong></p> <p>In Europe, agricultural practices have progressively evolved towards high productivity leading either to the intensification of productive and accessible areas or to the abandonment of less profitable sites. Both processes have led to the degradation of semi-natural habitats like extensive grasslands, threatening species such as the Eurasian Scops Owl <em>Otus scops</em> that rely on extensively managed agricultural landscapes. In this work, we aimed to assess the habitat preferences of the Scops Owl using habitat suitability models combined with a multi-scale approach. We generated a set of multi-scale predictors, considering both biotic and abiotic variables, built on two newly developed vegetation management and orthopteran abundance models. To select the variables to incorporate in a ‘best multi-scale model’, we chose the best spatial scale for each variable using univariate models and by calculating their relative importance through multi-model inference. Next, we built ensembles of small models (ESMs) at 10 different scales from 50 to 1000 m, and an additional model with each variable at its best scale (‘best multi-scale model’). The latter performed better than most of the other ESMs and allowed the creation of a high-resolution habitat suitability map for the species. Scops Owls showed a preference for dry sites with extensive and well-structured habitats with 30–40% bush cover, and relied strongly on semi-extensive grasslands covering at least 30% of the surface within 300 m of the territory centre and with high orthopteran availability near the centre (50-m radius), revealing a need for good foraging grounds near the nest. At a larger spatial scale within a radius of 1000 m, the habitat suitability of Scops Owls was negatively related to forest cover. The resulting ESM predictions provide valuable tools for conservation planning, highlighting sites in need of particular conservation efforts together with offering estimates of the percentage of habitat types and necessary prey abundance that could be used as targets in future management plans to ensure the persistence of the population.</p>
FIG 3 Glaucis hirsutus female, MHNG 1723.041 in On the Paraguayan specimens of Nothura darwinii (Aves: Tinamidae) and Glaucis hirsutus (Aves: Trochilidae) in the collection of the Natural History Museum of Geneva (Switzerland), with a review of South Brazilian reports of the latter
FIG 3 Glaucis hirsutus female, MHNG 1723.041.
FIG. 2 in A new, sibling species of cave flatworm from Switzerland (Platyhelminthes, Tricladida, Dendrocoelidae)
FIG. 2 Dendrocoelum nekoum. Holotype. Sagittal reconstruction of the copulatory apparatus.
FIG. 1 in A new, sibling species of cave flatworm from Switzerland (Platyhelminthes, Tricladida, Dendrocoelidae)
FIG. 1 Cleared specimen of Dendrocoelum nekoum, viewed from the ventral side.
FIG. 3 in A new, sibling species of cave flatworm from Switzerland (Platyhelminthes, Tricladida, Dendrocoelidae)
FIG. 3 Dendrocoelum nekoum. Holotype. Sagittal reconstruction of the adenodactyl.
FIG. 10 in Pseudoblothrus infernus sp. n. (Pseudoscorpiones, Syarinidae) from the Hölloch cave (Schwyz, Switzerland), with new records of Pseudoblothrus strinatii Vachon from Switzerland and France
FIG. 10 Pseudoblothrus infernus sp. n., holotype, alive; copyright Dr Ulrich Jörin, Zurich.
Fig. 4 in A New Species Of Rhagoletis (Diptera, Tephritidae) From Switzerland, With Discussion Of Its Relationships Within The Genus
Fig. 4. Rhagoletis batava male (a, с–e) and female (b, f–j): a — habitus dorsal, b — same, left; c, d — epandrium, hypandrium and surstyli (c — left, d — posterior), e — phallus glans; f — aculeus apex, g — ovipositor, h — spermatheca; i — eversible membrane, ventral. Scale: f — 0.1 mm, g — 0.5 mm.
Distribution. Endemic to Italy and marginally reaching S Switzerland in Ticino. in Cricetidae
Distribution. Endemic to Italy and marginally reaching S Switzerland in Ticino.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.