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695
datasets available to search
ShareScore release 0.7.1
Dataset results
695 results for “topologies”
Epigenomic and Topological Mechanisms Regulate Transcriptional Programs in Hepatocellular Carcinoma Cells
GEO Series GSE144893. Homo sapiens. 0 samples. Type: Other.
Disruptions of Topological Chromatin Domains Causes Pathogenic Rewiring of Gene-Enhancer Interactions
GEO Series GSE66383. Homo sapiens; Mus musculus. 31 samples. Type: Expression profiling by high throughput sequencing; Other.
Disruptions of Topological Chromatin Domains Causes Pathogenic Rewiring of Gene-Enhancer Interactions [RNA-Seq]
GEO Series GSE66377. Mus musculus. 10 samples. Type: Expression profiling by high throughput sequencing.
Topological isolation as a mechanism for precise control of developmental regulators in mammalian genomes [HiC]
GEO Series GSE130085. Homo sapiens. 17 samples. Type: Other.
Argonaute2 and LaminB repress transcription by controlling RNA Pol II recruitment and chromatin topology in Drosophila melanogaster (ChIP-Seq)
GEO Series GSE95402. Drosophila melanogaster. 119 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Allelic topological centering by transcription factors drives oncogenic multi-enhancer transcriptional regulation [ChIP-seq]
GEO Series GSE293334. Homo sapiens. 60 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
SMARCB1 loss creates patient-specific MYC topologies that drive malignant rhabdoid tumor growth
GEO Series GSE218115. Homo sapiens. 67 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Topological isolation as a mechanism for precise control of developmental regulators in mammalian genomes [4C-seq]
GEO Series GSE127195. Homo sapiens. 12 samples. Type: Other.
Topological screen identifies hundreds of Cp190 and CTCF dependent Drosophila chromatin insulator elements [HiC]
GEO Series GSE198760. Drosophila melanogaster. 6 samples. Type: Other.
Nucleosomal DNA has topological memory
GEO Series GSE228623. Saccharomyces cerevisiae. 6 samples. Type: Other.
Cdx is crucial for the timing mechanism driving collinear Hox activation and defines a trunk segment in the Hox cluster topology
GEO Series GSE91046. Mus musculus. 3 samples. Type: Other.
Topology of the human and mouse m6A RNA methylomes revealed by m6A-seq
GEO Series GSE37005. Mus musculus; Saccharomyces cerevisiae; Homo sapiens; Schizosaccharomyces pombe. 32 samples. Type: Expression profiling by array; Expression profiling by high throughput sequencing.
Chromatin topology and the timing of enhancer function at the HoxD locus [4C-seq]
GEO Series GSE154186. Mus musculus. 59 samples. Type: Other.
Altered chromatin topologies caused by balanced chromosomal translocation lead to central iris hypoplasia [Hi-C]
GEO Series GSE266514. Homo sapiens. 2 samples. Type: Other.
Tandem CTCF sites function as insulators to balance spatial chromatin contacts and topological enhancer-promoter selection [VI]
GEO Series GSE140570. Homo sapiens. 33 samples. Type: Expression profiling by high throughput sequencing.
Epigenetic maintenance of topological domains in the rearranged gibbon genome [WBGS]
GEO Series GSE115063. Macaca mulatta; Nomascus leucogenys. 2 samples. Type: Methylation profiling by high throughput sequencing.
Topologically Associated Domains Delineate Susceptibility to Somatic Hypermutation
GEO Series GSE139810. Homo sapiens. 69 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
Tandem CTCF sites function as insulators to balance spatial chromatin contacts and topological enhancer-promoter selection [VIII]
GEO Series GSE140869. Mus musculus. 20 samples. Type: Expression profiling by high throughput sequencing.
Regulation of Feather Length: FGF/IGF Signaling and NOTCH/YAP Modulation of Progenitor Cell Topology [scRNA-seq]
GEO Series GSE285384. Gallus gallus. 5 samples. Type: Expression profiling by high throughput sequencing.
Setdb1 regulates Cohesin at H3K9me3-independent topological domains [Hi-C]
GEO Series GSE188753. Mus musculus. 21 samples. Type: Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.