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Distribution. CW Madagascar, known from the type locality, Andramasay, two larger forest fragments N and E of Andramasay, as well as Tsingy de Bemaraha National Park and the adjacent Strict Nature Reserve; it probably occurs throughout the entire area between the Tsiribihina River in the S and the Manambolo Riverin the N, although more research is needed to confirm the limits of its distribution. in Lepilemuridae
Distribution. CW Madagascar, known from the type locality, Andramasay, two larger forest fragments N and E of Andramasay, as well as Tsingy de Bemaraha National Park and the adjacent Strict Nature Reserve; it probably occurs throughout the entire area between the Tsiribihina River in the S and the Manambolo Riverin the N, although more research is needed to confirm the limits of its distribution.
Distribution. EC Madagascar, known only from the type locality of Ambositra, north of Fianarantsoa; its continuing survival in the forest fragments of that region remains to be confirmed. Reports from the Bongolava Massif to the NW appear to be erroneous. in Cheirogaleidae
Distribution. EC Madagascar, known only from the type locality of Ambositra, north of Fianarantsoa; its continuing survival in the forest fragments of that region remains to be confirmed. Reports from the Bongolava Massif to the NW appear to be erroneous.
Distribution. NE Madagascar, known only from its type locality near the village of Anjiahely ¢.26 km W of Maroantsetra. It appears to be sympatric with Mittermeier's Mouse Lemur (M. mittermereri) at Anjiahely. in Cheirogaleidae
Distribution. NE Madagascar, known only from its type locality near the village of Anjiahely ¢.26 km W of Maroantsetra. It appears to be sympatric with Mittermeier's Mouse Lemur (M. mittermereri) at Anjiahely.
Distribution. CE Madagascar, but the geographic distribution is poorly known; at present known only from its type locality of Andasibe (= Périnet) and neighboring areas (e.g. Maromizaha Forest), Analamazaotra Special Reserve, Anjozorobe-Angavo Protected Area, and Mantadia National Park. in Cheirogaleidae
Distribution. CE Madagascar, but the geographic distribution is poorly known; at present known only from its type locality of Andasibe (= Périnet) and neighboring areas (e.g. Maromizaha Forest), Analamazaotra Special Reserve, Anjozorobe-Angavo Protected Area, and Mantadia National Park.
Distribution. CE Madagascar, known only from its type locality, the Sahafina Forest (29-230 m above sea level), a lowland rainforest fragment of 15-6 km2, and its surrounding "savoka" (fallow farmland with cultivated trees), about 58 km E of Andasibe-Mantadia National Park and 18 km W of the Indian Ocean. The geographic range is presumably limited to the lowland areas (below 700 m) between the Mangoro River to the S and the Rianila River to the N, an area of about 7600 km?2. in Cheirogaleidae
Distribution. CE Madagascar, known only from its type locality, the Sahafina Forest (29-230 m above sea level), a lowland rainforest fragment of 15-6 km2, and its surrounding "savoka" (fallow farmland with cultivated trees), about 58 km E of Andasibe-Mantadia National Park and 18 km W of the Indian Ocean. The geographic range is presumably limited to the lowland areas (below 700 m) between the Mangoro River to the S and the Rianila River to the N, an area of about 7600 km?2.
Distribution. SE coastal Madagascar, known only from its type locality at Kianjavato, just S of the Mananjary River, and from nearby Mananjary to the NE; it may also be found just S of the Mananara River N to the N bank of the Mananjary River. in Cheirogaleidae
Distribution. SE coastal Madagascar, known only from its type locality at Kianjavato, just S of the Mananjary River, and from nearby Mananjary to the NE; it may also be found just S of the Mananara River N to the N bank of the Mananjary River.
Distribution. NW Madagascar, known only from its type locality, the Antafondro Classified Forest N of the Andranomalaza River and W of the Manongarivo Special Reserve. in Cheirogaleidae
Distribution. NW Madagascar, known only from its type locality, the Antafondro Classified Forest N of the Andranomalaza River and W of the Manongarivo Special Reserve.
Distribution. NW Madagascar; the range is still incompletely known, but it is believed to be restricted to the Ankarafantsika region; the type specimen was collected adjacent to Lac Ravelobe in Ankarafantsika National Park, and the species is also known to occur in the Mariarano Classified Forest, just N of Mahajanga. in Cheirogaleidae
Distribution. NW Madagascar; the range is still incompletely known, but it is believed to be restricted to the Ankarafantsika region; the type specimen was collected adjacent to Lac Ravelobe in Ankarafantsika National Park, and the species is also known to occur in the Mariarano Classified Forest, just N of Mahajanga.
Subspecies and Distribution. H.g.griseusLink,1795—CEMadagascar,roughlyfromtheOnibeRiverStotheOniveRiver(whichmayseparateitfromthesubspeciesgilberti). H.g.gilbert:Rabarivolaetal.,2007—ECMadagascar,knownonlyfromitstypelocalityofBeanamalaoandpresumablyasmallareaNoftheNosivoloRiverandSoftheMangoroandOniverivers. H. g. ranomafanensis Rabarivola et al., 2007 — CW & CE Madagascar, occurs in two, widely separated population pockets, one in the W in the forests of Tsingy de Bemaraha, probably as far as the Betsiboka River, and the other in the E in forests to the S of the Mangoro and Onive rivers (except Beanamalao, the type locality of gilberti). in Lemuridae
Subspecies and Distribution. H.g.griseusLink,1795—CEMadagascar,roughlyfromtheOnibeRiverStotheOniveRiver(whichmayseparateitfromthesubspeciesgilberti). H.g.gilbert:Rabarivolaetal.,2007—ECMadagascar,knownonlyfromitstypelocalityofBeanamalaoandpresumablyasmallareaNoftheNosivoloRiverandSoftheMangoroandOniverivers. H. g. ranomafanensis Rabarivola et al., 2007 — CW & CE Madagascar, occurs in two, widely separated population pockets, one in the W in the forests of Tsingy de Bemaraha, probably as far as the Betsiboka River, and the other in the E in forests to the S of the Mangoro and Onive rivers (except Beanamalao, the type locality of gilberti).
Integration of single-cell RNA-sequencing data across tissues and cancer types towards immune cell characterization
<p>To better understand dendritic cell states and subtypes, we collected individual single-cell RNAseq datasets from various studies and further integrated, batch corrected, and reprocessed the data using Besca (https://github.com/bedapub/besca).</p> <p>The following files are included:<br> 1) study_table_integrated_DCs.xlsx - contains a list of studies from where the datasets were gathered.<br> 2) int_dcs.raw.h5ad - An anndata object file containing the combined raw single-cell counts for DCs from individual studies. The datasets were joined based on the union of variables.<br> 3) intersection_genes_integrated_dcs.tsv - List of genes if the datasets were joined based on the intersection of variables. These variables were used in the subsequent analyses.</p> <p>4) int_dcs.annotated.h5ad - An anndata object file containing single-cell logarithmized counts for DCs data that have been integrated and reprocessed. The rows of the file contain cells, and the columns contain highly variable genes. A sparse matrix containing the logarithmized counts from all the genes (from the intersection genes integrated dcs.tsv file) can also be found (adata.raw.X) in the object. In the observations, cell-type annotation is available at three different hierarchal levels.<br> <br> This data was further used to produce results for the publication (https://jitc.bmj.com/content/10/6/e004268) on the effects of Toll-like receptor 8 agonists on conventional DCs.</p>
Data from: Classification and mapping of low-statured 'shrubland' cover types in post-agricultural landscapes of the US Northeast
<p>Novel plant communities reshape landscapes and pose challenges for land cover classification and mapping that can constrain research and stewardship efforts. In the US Northeast, emergence of low-statured woody vegetation, or 'shrublands', instead of secondary forests in post-agricultural landscapes is well-documented by field studies, but poorly understood from a landscape perspective, which limits the ability to systematically study and manage these lands. To address gaps in classification/mapping of low-statured cover types where they have been historically rare, we developed models to predict 'shrubland' distributions at 30m resolution across New York State (NYS), using machine learning and model ensembling techniques to integrate remote sensing of structural (airborne LIDAR) and optical (satellite imagery) properties of vegetation cover. We first classified a 1m canopy height model (CHM), derived from a "patchwork" of available LIDAR coverages, to define shrubland presence/absence. Next, these non-contiguous maps were used to train a model ensemble based on temporally-segmented imagery to predict 'shrubland' probability for the entire study landscape (NYS). Approximately 2.5% of the CHM coverage area was classified as shrubland. Models using Landsat predictors trained on the classified CHM were effective at identifying shrubland (test set AUC=0.893, real-world AUC=0.904), in discriminating between shrub/young forest and other cover classes, and produced qualitatively sensible maps, even when extending beyond the original training data. After ground-truthing, we expect these shrubland maps and models will have many research and stewardship applications including wildlife conservation, invasive species mitigation and natural climate solutions. Overall our results compared favorably in terms of accuracy with existing LULC products, suggesting that incorporation of airborne LiDAR, even from a discontinuous patchwork of coverages, can improve LULC classification of historically rare but increasingly prevalent 'shrubland' habitats across broader areas.</p>
FIGURE 2. A in Type locality, distribution and conservation of the threatened catfish Taunayia bifasciata (Eigenmann & Norris 1900) (Siluriformes: Heptapteridae) in the Atlantic Forest streams of Southeastern Brazil
FIGURE 2. A. Catalog ledger of the Indiana University with catalog number IU 9291 (arrow) and B. Original jar labels of the holotype of Nannoglanis bifasciata Eigenmann & Norris 1900 CAS 75771(IU 09291). Indicating 'Alto da Serra', as the type locality. Photo by David Catania.
FIGURE 3 in Type locality, distribution and conservation of the threatened catfish Taunayia bifasciata (Eigenmann & Norris 1900) (Siluriformes: Heptapteridae) in the Atlantic Forest streams of Southeastern Brazil
FIGURE 3. Geographic distribution of Taunayia bifasciata. Symbols: white star: type locality of T. bifasciata; blue circle: records in Tietê river basin; red diamonds: records in Paraíba do Sul river basin; purple square: records Itapanhaú River basin; orange pentagon: new record of T. bifasciata in Mambucaba river basin. White outline: Serra da Bocaina National Park; black lines: state limits.
FIGURE 4. A in Type locality, distribution and conservation of the threatened catfish Taunayia bifasciata (Eigenmann & Norris 1900) (Siluriformes: Heptapteridae) in the Atlantic Forest streams of Southeastern Brazil
FIGURE 4. A. Sampling site of Taunayia bifasciata (Eigenmann & Norris 1900) in the Mambucaba river basin at the Serra da Bocaina National Park, Rio de Janeiro State, Brazil. B. The Veados waterfall, which is just upstream the sampling site.
FIGURE 1 in Type locality, distribution and conservation of the threatened catfish Taunayia bifasciata (Eigenmann & Norris 1900) (Siluriformes: Heptapteridae) in the Atlantic Forest streams of Southeastern Brazil
FIGURE 1. Specimens of Taunayia bifasciata (Eigenmann & Norris 1900) in dorsal (tops), lateral (middles), and ventral (bottoms) views. Left is the holotype of Nannoglanis bifasciatus Eigenmann & Norris 1900 (CAS 75771), photo by David Catania; right is the specimen collected in the Mambucaba river basin, Serra da Bocaina National Park, Rio de Janeiro State, Brazil (UFRN 5592), photo by Lucas Medeiros. Scale bar: 10 mm.
FIGURE 1. Type locality marked with a in Description of a new species of Liropus (Crustacea, Amphipoda) from Puerto Vallarta, Pacific coast of Mexico
FIGURE 1. Type locality marked with a filled circle in Los Arcos National Marine Park, near the city of Puerto Vallarta, Jalisco, Mexico.
FIGURE 1. Dendarus armeniacus, type specimens. A in Contribution to the knowledge of the genus Dendarus Dejean, 1821 (Coleoptera: Tenebrionidae: Blaptinae: Dendarini) from Iran, Turkmenistan and some adjacent territories
FIGURE 1. Dendarus armeniacus, type specimens. A = Lectotype, male, dorsally; B = ditto, ventrally; C = labels of the lectotype; D = type series; E = male mesotibia, ventrally; F = male mesotibia, laterally.
Subspecies and Distribution. T:c.canescens].A.Allen,1893—WMexico,fromSSonoratoOaxaca,andintheYucatanPeninsula;possiblyalsoinNWGuatemala. T.c.insularisMerriam,1898—IslasMarias,Nayarit,Mexico. T.c.oaxacaeMerriam,1897—knownonlyfromthetypelocality,"CityofOaxaca,"vicinityofOaxacadeJuarez,probablynearslopesoftheCerroSanFelipe,Oaxaca,Mexico. T: c. sinaloaeJ. A. Allen, 1898 — known only from the type locality, Tatamales, Sinaloa, Mexico. in Didelphidae
Subspecies and Distribution. T:c.canescens].A.Allen,1893—WMexico,fromSSonoratoOaxaca,andintheYucatanPeninsula;possiblyalsoinNWGuatemala. T.c.insularisMerriam,1898—IslasMarias,Nayarit,Mexico. T.c.oaxacaeMerriam,1897—knownonlyfromthetypelocality,"CityofOaxaca,"vicinityofOaxacadeJuarez,probablynearslopesoftheCerroSanFelipe,Oaxaca,Mexico. T: c. sinaloaeJ. A. Allen, 1898 — known only from the type locality, Tatamales, Sinaloa, Mexico.
Distribution. SE coastal Madagascar, currently known only from the area ofits type locality, the Manombo Special Reserve and Agnalazaha Forest. in Indriidae
Distribution. SE coastal Madagascar, currently known only from the area ofits type locality, the Manombo Special Reserve and Agnalazaha Forest.
Subspecies and Distribution. P a. amicus Thomas, 1900 — Andean foothills from NW to SW Peru. P. a. maritimus Thomas, 1900 — known only from the type locality in P.a. Province, WC Peru, at an elevation of 1200 m. P a. montanus Thomas, 1900 — W Andean slopes in La Libertad and Ancash departments. in Cricetidae
Subspecies and Distribution. P a. amicus Thomas, 1900 — Andean foothills from NW to SW Peru. P. a. maritimus Thomas, 1900 — known only from the type locality in P.a. Province, WC Peru, at an elevation of 1200 m. P a. montanus Thomas, 1900 — W Andean slopes in La Libertad and Ancash departments.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.