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1,353
datasets available to search
ShareScore release 0.9.0
Dataset results
1,353 results for “single-cell transcriptomics”
HKU Gastric Intestinal Metaplasia study: Single-cell RNA sequencing, transcriptome and methylation profiling
GEO Series GSE210995. Homo sapiens. 199 samples. Type: Expression profiling by high throughput sequencing; Methylation profiling by genome tiling array.
Single-cell transcriptome comparison of bladder cancer revels its ecosystem
GEO Series GSE190888. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic analysis identified resistant MDSCs and a stress-tolerant gene co-expression network as common MDSC features across multiple disease settings
GEO Series GSE249243. Homo sapiens. 16 samples. Type: Methylation profiling by SNP array.
Single-Cell Transcriptomics Identifies Brain Endothelium Inflammatory Networks in Experimental Autoimmune Encephalomyelitis
GEO Series GSE199460. Mus musculus. 11 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic profiling of lung interstitial macrophages in bleomycin-induced pulmonary fibrosis in Spp1-EGFP reporter mice
GEO Series GSE302018. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.
singIST: an integrative method for comparative single-cell transcriptomics between disease models and humans
GEO Series GSE314373. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome and 3D genome atlas of the developing mouse brain
GEO Series GSE162511. Homo sapiens; Mus musculus. 4314 samples. Type: Expression profiling by high throughput sequencing; Other.
A single-cell transcriptomic atlas of all cell types in the entire 5xFAD mouse brain in response to dietary inulin supplementation
GEO Series GSE262881. Mus musculus. 24 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell Transcriptomics of Engineered Cardiac Tissues from Patient-Specific Induced Pluripotent Stem Cell-Derived Cardiomyocytes Reveals Abnormal Developmental Trajectory and Intrinsic Contractile
GEO Series GSE157157. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA sequencing reveals transcriptome alterations of liver sinusoidal endothelial cells in different zonal microenvironments of cirrhotic livers
GEO Series GSE147581. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Direct Induction of hemogenic endothelial progenitors from hPSCs by defined factors revealed by single-cell transcriptome analysis
GEO Series GSE161408. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
Single-cell Transcriptomic Analysis Reveals Disparate Effector Differentiation Pathways in Human Treg Compartment [Treg patients]
GEO Series GSE175603. Homo sapiens. 18 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome profiling of the human endometrium from patients with recurrent implantation failure
GEO Series GSE183837. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomics highlights the proinflammatory contribution of C1q-high monocytes to Behçet’s disease
GEO Series GSE198616. Homo sapiens. 16 samples. Type: Expression profiling by high throughput sequencing.
Deciphering the age-dependent changes of pulmonary fibroblasts in mice by single-cell transcriptomics
GEO Series GSE237757. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome of myeloid progenitor populations from the mouse bone marrow
GEO Series GSE249838. Mus musculus. 5 samples. Type: Expression profiling by high throughput sequencing.
A yeast-optimized single-cell transcriptomics platform elucidates how mycophenolic acid and guanine alter global mRNA levels
GEO Series GSE165686. Saccharomyces cerevisiae. 4 samples. Type: Expression profiling by high throughput sequencing.
A study on the radiosensitivity of radiation-induced lung injury at the acute phase based on single-cell transcriptomics
GEO Series GSE206426. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Bulk and single-cell transcriptomics identify gene signatures of stem cell-derived NK cell donors with superior anti-tumor activity
GEO Series GSE249992. Homo sapiens. 17 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome profiling of zebrafish pancreatic beta-cells segregated by CaMPARI-based calcium labeling.
GEO Series GSE237867. Danio rerio. 191 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.