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695
datasets available to search
ShareScore release 0.7.1
Dataset results
695 results for “topologies”
Topological demarcation by HMGB2 is disrupted early upon senescence entry and induces CTCF clustering across cell types [Hi-C]
GEO Series GSE98443. Homo sapiens. 14 samples. Type: Other.
KSHV Topologically Associating Domains in Latent Chromatin and Regulation of Reactivation
GEO Series GSE163696. Homo sapiens; Human gammaherpesvirus 8. 10 samples. Type: Other.
Long-distance association of topological boundaries through nuclear condensates (Hi-C)
GEO Series GSE195565. Homo sapiens. 24 samples. Type: Other.
The fork protection complex generates DNA topological stress-induced DNA damage while ensuring full and faithful genome duplication [TrAEL-seq]
GEO Series GSE239966. Saccharomyces cerevisiae. 4 samples. Type: Other.
Glucocorticoid stimulation induces regionalized gene responses within topologically associating domains
GEO Series GSE226487. Homo sapiens. 10 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Allelic topological centering by transcription factors drives oncogenic multi-enhancer transcriptional regulation [RNA-seq]
GEO Series GSE293331. Homo sapiens. 54 samples. Type: Expression profiling by high throughput sequencing.
Cohesin Members Stag1 and Stag2 Display Distinct Roles in Chromatin Accessibility and Topological Control of HSC Self-Renewal and Differentiation [ChIP_LinNeg_Stag1Stag2CTCF]
GEO Series GSE138005. Mus musculus. 22 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Chromosome length influences replication-induced topological stress
GEO Series GSE26263. Saccharomyces cerevisiae. 34 samples. Type: Genome binding/occupancy profiling by genome tiling array.
Tandem CTCF sites function as insulators to balance spatial chromatin contacts and topological enhancer-promoter selection
GEO Series GSE138646. Homo sapiens; Mus musculus. 790 samples. Type: Expression profiling by high throughput sequencing; Other.
The Fork Protection Complex generates DNA topological stress induced DNA damage while ensuring full and faithful genome duplication
GEO Series GSE239967. Saccharomyces cerevisiae. 92 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
CRISPR Inversion of CTCF Sites Alters Genome Topology and Enhancer/Promoter Function
GEO Series GSE71275. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
SMARCB1 loss creates patient-specific MYC topologies that drive malignant rhabdoid tumor growth [ChIP-seq]
GEO Series GSE218112. Homo sapiens. 23 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Chromatin Topology Reorganization and Transcription Repression by PML/RARα in Acute Promyeloid Leukemia (ChIP-seq)
GEO Series GSE142197. Homo sapiens. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Cohesin Members Stag1 and Stag2 Display Distinct Roles in Chromatin Accessibility and Topological Control of HSC Self-Renewal and Differentiation [ATAC_LinNegBM]
GEO Series GSE138004. Mus musculus. 5 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Interplay between genome topology and gene regulation during somatic cell reprogramming [ATAC-seq]
GEO Series GSE96554. Mus musculus. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Chromatin topology and the timing of enhancer function at the HoxD locus [ChIP-seq]
GEO Series GSE154187. Mus musculus. 9 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Chromatin topology and the timing of enhancer function at the HoxD locus
GEO Series GSE154189. Mus musculus. 72 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
FIG. 1. Bayesian consensus topology with support values for major nodes. Values above indicate posterior probabilities and values below represent 1,000 in Diversity of Hipposideridae in the Mount Nimba massif, West Africa, and the taxonomic status of Hipposideros lamottei
FIG. 1. Bayesian consensus topology with support values for major nodes. Values above indicate posterior probabilities and values below represent 1,000 bootstraps. An 'X' indicates that the node was not recovered in the respective analysis
FIGURE 7. The phylogenetic tree topology for Urocaridella arabianensis n in Urocaridella arabianensis n. sp., a new Palaemonid shrimp (Crustacea, Decapoda Palaemonidae) from Lakshadweep Islands, India with taxonomic comparison on the genus Urocaridella Borradaile, 1915
FIGURE 7. The phylogenetic tree topology for Urocaridella arabianensis n. sp. with congener species based on COI (A), 16S (B) genes sequences using Bayesian inference (BI)/maximum likelihood (ML) analyses.
FIGURE 8. The phylogenetic tree topology for Urocaridella arabianensis n in Urocaridella arabianensis n. sp., a new Palaemonid shrimp (Crustacea, Decapoda Palaemonidae) from Lakshadweep Islands, India with taxonomic comparison on the genus Urocaridella Borradaile, 1915
FIGURE 8. The phylogenetic tree topology for Urocaridella arabianensis n. sp. with congener species based on 18S (A) and H3 (B) genes sequences using Bayesian inference (BI)/maximum likelihood (ML) analyses.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.