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FIGURES 56–58 in A catalogue of the types of rove beetles (Coleoptera: Staphylinidae) deposited in the collection of Johan Heinrich Hochhuth in the National Museum of Natural History of the National Academy of Sciences of Ukraine

FIGURES 56–58. Quedius plagiatus (Figs 56a–b), Ocypus pullus (Figs 57a–e), Gyrophaena puncticollis (Figs. 58a–k): 56a, 57a, 57d, 58a, 58f, 58j—habitus, 57b—aedeagus and apical abdominal segment, 58b–d, 58g–h—apical abdominal segments, 57c, 57e, 58e, 58i, 58k—labels. Scale bars: 2.0 mm (Figs 57a, 57d), 1.0 mm (Figs 56a, 58a, 58f, 58j), 0.5 mm (57b), 0.2 mm (Figs 58b–d, 58g–h).

FIGURES 25–29 in A catalogue of the types of rove beetles (Coleoptera: Staphylinidae) deposited in the collection of Johan Heinrich Hochhuth in the National Museum of Natural History of the National Academy of Sciences of Ukraine

FIGURES 25–29. Conosoma erythrinum (Figs 25a–d), Conurus erythrocephalus (Figs 26a–b), Philonthus erythrostomus (Figs 27a–c), Xantholinus fasciatus (Figs 28a–d), Philonthus femoralis (Figs 29a–c): 25a, 26a, 27a, 28a, 29a—habitus, 25b–c, 27b, 28b, 29b—apical segments of abdomen, 28c—apical segment of abdomen and aedeagus, 25d, 26b, 27c, 28d, 29c—labels. Scale bars: 1.0 mm (Figs 25a, 26a, 27a, 28a, 29a), 0.5 mm (Figs 25b–c, 27b, 28b, 29b).

FIGURES 5–7 in A catalogue of the types of rove beetles (Coleoptera: Staphylinidae) deposited in the collection of Johan Heinrich Hochhuth in the National Museum of Natural History of the National Academy of Sciences of Ukraine

FIGURES 5–7. Falagria atra (Figs 5a–c), Lathrobium pallidipenne (Figs 6a–c), Philonthus brunnicollis (Figs 7a–h): 5a, 6a, 7a, 7g, 7d—habitus (dorsal view), 5b, 6b, 7b, 7e, 7h—aedeagus (6b: lateral view, 5a, 7b, 7e: parameral view), 5c, 6c, 7c, 7i, 7f—labels. Scale bars: 2.0 mm (Fig. 6a), 1 mm (Figs 7a, 7g, 7d), 0.5 mm (Figs 5b, 6b, 7b, 7e, 7h).

FIGURES 74–77 in A catalogue of the types of rove beetles (Coleoptera: Staphylinidae) deposited in the collection of Johan Heinrich Hochhuth in the National Museum of Natural History of the National Academy of Sciences of Ukraine

FIGURES 74–77. Xantholinus variabilis (Figs 74a–d), Bolitochara venusta (Figs. 75a–c), Lathrobium volgense (Figs 76a–d), Platystethus wankowiczi (Figs 77a–b): 74a, 74c, 75a, 76a, 77a—habitus, 75b, 76b—apical abdominal segments, 76c—aedeagus in lateral view, 74b, 74d, 75c, 76d, 77b–labels.

opencc-by-4.0Jul 2022View details →

Type IIP Supernovae IV. Shock Breakout from Progenitor Stars Modeled with Convective Overshoot and Mass Loss [Dataset]

Input and output files of MESA and STELLA associated with the published journal article Balaji et al. (2022; doi:10.3847/1538-4357/ac7528). We used MESA version r-10398 and MESA SDK version 20180822. We employ two sets of mass loss schemes: a standard “Dutch” scheme and an “enhanced” episodic late mass loss scheme to construct circumstellar matter. Evolution of the enhanced mass loss models in MESA from the pre-main sequence stage through nuclear burning stages until just before core-collapse is contained in “pre-ccsn_enhanced_mass_loss.tar.xz”. The “MESA_inputs” folder contains all the inlist files and “run_star_extras.f”.  “run_star_extras.f” is the same for all the enhanced mass loss models. The inlists for each of the different models can be easily obtained by editing the parameters: “initial_mass” in “inlist_cluster”, overshoot factors in “inlist_control” and the saved model names in “inlist_convert” and “inlist_star”. Each of the “#M_z0.0060_f_#_f0_0.005.tar.xz” directories, indicative of a model of particular ZAMS mass and overshoot parameter (f), contains “*.mod” files and a “LOGS” directory which in turn contains “history.data” files and the “profile#.data” file at core-collapse. Similar data files for the Dutch mass loss models are given in the Zenodo publication: <a href="https://doi.org/10.5281/zenodo.3783492">https://doi.org/10.5281/zenodo.3783492</a> The “ccsn.tar.xz” folder contains input and output files from the core-collapse step executed in MESA, separately for the Dutch mass loss and enhanced mass loss models. The “MESA_inputs” folder contains all the inlist files where “run_star_extras.f” is the same for all the Dutch mass loss models and for all the enhanced mass loss models separately. The inlists for each of the different models can be obtained by editing “initial_mass” and “inject_until_reach_model_with_total_energy” in “inlist_edep”.  Each of the “#M_z0.0060_f_#_f0_0.005_edep_#.tar.xz” directories, now, also indicative of the EDEP of explosion contains the “*.mod” files after every step, the “mesa.abn” and “mesa.hyd” files which initialise STELLA, and a LOGS directory which contains the “history.data” files after every step.   The “STELLA.tar.xz” folder contains the output files and “stella_extras” from STELLA for each of the Dutch mass loss and Enhanced mass models separately in a “res” directory. For the Dutch mass loss, 12 solar mass, f = 0.025, EDEP = 1.0 FOE model which was studied extensively in our work, the “mesa.dat” file inside "/strad/run" of STELLA was modified to display profiles of radiation hydrodynamic variables (in “mesa.swd”) at earlier time instants than what is reported by STELLA, by default. The python code: "csm-profile-maker.py" constructs profiles of circumstellar matter from mass loss data from MESA which was then appended to the models before initialisation of STELLA. For more details on the methods of simulations, see section 4 of the published article.

FIGURES 45–46 in A catalogue of the types of rove beetles (Coleoptera: Staphylinidae) deposited in the collection of Johan Heinrich Hochhuth in the National Museum of Natural History of the National Academy of Sciences of Ukraine

FIGURES 45–46. Trogophloeus kiesenwetterii (Figs 45a–d), Encephalus kraatzii (Figs 46a–e): 45a, 46a—habitus, 45b–c, 46b–d—abdominal segments, 45d, 46e—labels. Scale bars: 1.0 mm (Figs 45a, 46a), 0.2 mm (Figs 45b–c, 46b–d).

FIGURES 16–17 in A catalogue of the types of rove beetles (Coleoptera: Staphylinidae) deposited in the collection of Johan Heinrich Hochhuth in the National Museum of Natural History of the National Academy of Sciences of Ukraine

FIGURES 16–17. Ocypus cyanochloris (Figs 16a–b), Platystethus debilis (Figs 17a–k): 16a, 17a, 17a, 17e, 17g—habitus, 16b—aedeagus, lateral view, 17i–17j—apical abdominal segments, 16c, 17b, 17d, 17f, 17k—labels. Scale bars: 2.0 mm (Figs 16a), 0.5 mm (Figs 16b, 17a, 17c, 17e, 17g, 17i–17j).

FIGURES 42–44 in A catalogue of the types of rove beetles (Coleoptera: Staphylinidae) deposited in the collection of Johan Heinrich Hochhuth in the National Museum of Natural History of the National Academy of Sciences of Ukraine

FIGURES 42–44. Philonthus interpunctatus (Figs 42a–d), Myrmedonia kawalli (Figs 43a–c, 44a–c): 42a, 42c, 43a, 44a—habitus, 43c, 44b—apical abdominal segments and aedeagus, 42b, 42d, 43b, 44c—labels. Scale bars: 1.0 mm (Figs. 42a, 42c, 43a, 44a), 0.2 mm (Figs 43c, 44b).

FIGURES 41 in A catalogue of the types of rove beetles (Coleoptera: Staphylinidae) deposited in the collection of Johan Heinrich Hochhuth in the National Museum of Natural History of the National Academy of Sciences of Ukraine

FIGURES 41. Philonthus interpunctatus (Figs 41a–m): 41a, 41e, 41g, 41i—habitus, 41c—aedeagus, 41j—paramera, 41b, 41l—apical abdominal segments, 41k—left protarsus, 41d, 41f, 41h, 41m—labels. Scale bars: 2.0 mm (Figs 41°, 41e, 41g, 41i), 0.5 mm (Figs 41b–c, 41j–l).

FIGURES 34–35 in A catalogue of the types of rove beetles (Coleoptera: Staphylinidae) deposited in the collection of Johan Heinrich Hochhuth in the National Museum of Natural History of the National Academy of Sciences of Ukraine

FIGURES 34–35. Oxypoda gotschii (Figs 34a–g), Ocypus gracilicornis (Figs 35a–f): 34a, 34f, 35a, 35d–habitus, 34b–c, 35b, 35e—apical segments of the abdomen, 34d–aedeagus, 34e, 34g, 35c, 35f—labels. Scale bars: 2.0 mm (Figs. 35a, 35d), 1.0 mm (Figs. 34a, 34f), 0.5 mm (Figs. 34b–d).

FIGURES 23–24 in A catalogue of the types of rove beetles (Coleoptera: Staphylinidae) deposited in the collection of Johan Heinrich Hochhuth in the National Museum of Natural History of the National Academy of Sciences of Ukraine

FIGURES 23–24. Heterothops distinguendus (Figs 23a–i), Deleaster erichsoni (Figs 24a–b): 23a, 23d, 23fa, 23h, 24a—habitus, 23b—edeagus, ventral view, 23c, 23e, 23g, 23i, 24b—labels. Scale bars: 1.0 mm (Figs 23a, 23d, 23f, 23h, 24a), 0.2 mm (Figs 23b).

opencc-zeroJul 2022View details →

dryad32/100

CODEX multiplexed imaging cell datasets used for using STELLAR to transfer cell type annotations to other tissues and donors

We performed CODEX (co-detection by indexing) multiplexed imaging on 24 sections of the human intestine from 3 donors (B004, B005, B006) using a panel of 47 oligonucleotide-barcoded antibodies. We also performed CODEX imaging on both human tonsil and Barrett's esophagus (BE) using a panel of 57 oligonucleotide-barcoded antibodies. Subsequently images underwent standard CODEX image processing (tile stitching, drift compensation, cycle concatenation, background subtraction, deconvolution, and determination of best focal plane), single cell segmentation, and column marker z-normalization by tissue. Output of this process were dataframes of 870,000 cells and 220,000 cells respectively with fluorescence values quantified from each marker.

Distribution. Known only from type locality, which is uncertain but is thought to be the Maluwe-Sarengi district. Perhaps, occurs throughout N & C Zambia. in Soricidae

Distribution. Known only from type locality, which is uncertain but is thought to be the Maluwe-Sarengi district. Perhaps, occurs throughout N & C Zambia.

Distribution. Presumably endemic to mountains of Cameroon; known from type locality, Bamenda Highlands, and more recently from Mt Oku. in Soricidae

Distribution. Presumably endemic to mountains of Cameroon; known from type locality, Bamenda Highlands, and more recently from Mt Oku.

Distribution. NE of DR Congo, and possibly restricted to this region; known from type locality, Ituri Forest, and Medje. Recently it has been reported from Okapi Wildlife Reserve and Masako Forest. in Soricidae

Distribution. NE of DR Congo, and possibly restricted to this region; known from type locality, Ituri Forest, and Medje. Recently it has been reported from Okapi Wildlife Reserve and Masako Forest.

Distribution. NE DR Congo; until 1990, recorded only from type locality and Masako Forest, near Kisangani. Since then, it has been recorded in various forests in vicinity of Kisangani. Also, found 2 km W of Epulu Forest and on Kungulu I. Its distribution still appears to be very limited. in Soricidae

Distribution. NE DR Congo; until 1990, recorded only from type locality and Masako Forest, near Kisangani. Since then, it has been recorded in various forests in vicinity of Kisangani. Also, found 2 km W of Epulu Forest and on Kungulu I. Its distribution still appears to be very limited.

Distribution. Uncertain, but the type locality is generally accepted to be Mt Kilimanjaro, NE Tanzania; there are further reports of this species throughout W & E Africa (including some recent ones from Uganda), but they cannot be confirmed since most of the specimens have been wrongly attributed. in Soricidae

Distribution. Uncertain, but the type locality is generally accepted to be Mt Kilimanjaro, NE Tanzania; there are further reports of this species throughout W & E Africa (including some recent ones from Uganda), but they cannot be confirmed since most of the specimens have been wrongly attributed.

Distribution. Known with certainty from the type locality in N Pakistan; reported specimens from further localities in Pakistan may belong to Zarudny's White-toothed Shrew (C. zarudny). in Soricidae

Distribution. Known with certainty from the type locality in N Pakistan; reported specimens from further localities in Pakistan may belong to Zarudny's White-toothed Shrew (C. zarudny).

Subspecies and Distribution. C.d.draculaThomas,1912—C&SCChina(Sichuan,Yunnan,Chongqing,Guizhou,andGuangxi),NLaos,andNVietnam. C. d. mansumensis Carter, 1942 — known only from the type locality in N Myanmar; range limits unclear because the species has been recognized as a synonym for a long time, probably N Myanmar. in Soricidae

Subspecies and Distribution. C.d.draculaThomas,1912—C&SCChina(Sichuan,Yunnan,Chongqing,Guizhou,andGuangxi),NLaos,andNVietnam. C. d. mansumensis Carter, 1942 — known only from the type locality in N Myanmar; range limits unclear because the species has been recognized as a synonym for a long time, probably N Myanmar.

Distribution. Known only from the type locality in Uttarakhand and from the Kulu Valley, Kangra District, Himachal Pradesh, NW India. in Soricidae

Distribution. Known only from the type locality in Uttarakhand and from the Kulu Valley, Kangra District, Himachal Pradesh, NW India.