Find research datasets worth reusing

FIGURE 11 in Geographic structure of genetic variation in the Parachute Gecko Ptychozoon lionotum Annandale, 1905 across Indochina and Sundaland with descriptions of three new species

FIGURE 11. Habitat of Ptychozoon kabkaebin sp, nov. at Nakai-Nam Theun National Protected Area, Phou Ack Mountain, Boualapha District, Khammouan Province, Laos. Photograph by B. L. Stuart.

FIGURE 10 in Geographic structure of genetic variation in the Parachute Gecko Ptychozoon lionotum Annandale, 1905 across Indochina and Sundaland with descriptions of three new species

FIGURE 10. Ptychozoon kabkaebin sp. nov. A. Paratype NUOL 00036 from Nakai-Nam Theun National Protected Area, Phou Ack Mountain, Boualapha District, Khammouan Province, Laos. Photograph by B. L. Stuart. B. Paratype FMNH 271140 from Nakai-Nam Theun National Protected Area, Phou Ak Mountain, Boualapha District, Khammouan Province, Laos. Photograph by B. L. Stuart. C. Holotype NCSM 80585 from Houay Ta Ang Stream, Pakkading District, Bolikhamxay Province, Laos. Photograph by L. L. Grismer.

FIGURE 9 in Geographic structure of genetic variation in the Parachute Gecko Ptychozoon lionotum Annandale, 1905 across Indochina and Sundaland with descriptions of three new species

FIGURE 9. Habitat of Ptychozoon cicakterbang sp. nov. A. Forest at the type locality of Gunung Jerai, Kedah, Peninsular Malaysia. B. Microhabitat along the Tekek-Juara Trail, Pulau Tioman, Peninsular Malaysia.

FIGURE 13 in Geographic structure of genetic variation in the Parachute Gecko Ptychozoon lionotum Annandale, 1905 across Indochina and Sundaland with descriptions of three new species

FIGURE 13. Forest habitat of Ptychozoon tokehos sp. nov. A. Phnom Samkos, Pursat Province, Cambodia. B. Bokor National Park, Teuk Chou District, Kampot Province, Cambodia. Photographs by L. L. Grismer.

FIGURE 5 in Geographic structure of genetic variation in the Parachute Gecko Ptychozoon lionotum Annandale, 1905 across Indochina and Sundaland with descriptions of three new species

FIGURE 5. Boxplot analyses of the characters bearing statistically significant mean values between various combinations of species pairs. The species pairs are listed on the plot. Colored squares represent the 50% quartile. Orange circles are the means.

FIGURE 12 in Geographic structure of genetic variation in the Parachute Gecko Ptychozoon lionotum Annandale, 1905 across Indochina and Sundaland with descriptions of three new species

FIGURE 12. Ptychozoon tokehos sp. nov. A. CBC 1217 from Phnom Samkos, Pursat Province, Cambodia. Photograph by Neang Thy. B. Paratype CBC 03162 from Bokor National Park, Teuk Chou District, Kampot Province, Cambodia. Photograph by Neang Thy. C. USNM 587523 from Lenya National Park, Tanintharyi Region, Myanmar. Photograph by D. Mulcahy. D. Holotype FMNH 261853 from Kirirom National Park, Phnom Sruoch District, Kampong Speu Province, Cambodia. Photograph by L. L. Grismer.

FIGURE 3 in Geographic structure of genetic variation in the Parachute Gecko Ptychozoon lionotum Annandale, 1905 across Indochina and Sundaland with descriptions of three new species

FIGURE 3. Uncorrected pairwise sequence divergence between species of rhe Ptychzoon lionotum group (boxplots) and between individuals of the P. lionotum group (matrix). Colored squares represent the 50% quartile. Light-blue circles are means.

FIGURE 1 in Geographic structure of genetic variation in the Parachute Gecko Ptychozoon lionotum Annandale, 1905 across Indochina and Sundaland with descriptions of three new species

FIGURE 1. Distribution of Ptychozoon lionotum, P. cicakterbang sp. nov., P. kabkaebin sp. nov., and P. tokehos sp. nov. Diamond designated localities are non-specimen based and considered tentative. Their sources are: (1) Pulau Natuna Besar, Indonesia (Leong et al. 2003); (14) Hat Yai, Songkla, Thailand (LSUDPC 10946); (18) Ko Samui, Surat Thani, Thailand (LSUDPC 10948); (22) Dong Paya Fei Mounatains, Nakhon Ratchasima, Thailand (Smith 1935); (23) Chantabun, Chanthaburi, Thailand (Smith 1935); (24) Phnom Samkos, Pursat, Cambodia (LSUDPC 10949–53); (28) Phu Quoc Island, Kiem Giang Province, Vietnam (Nguyen et al. 2009); (29) Trang Bom, Dong Nai Province, Vietnam (Nguyen et al. 2009) however this specimen may be P. trinotaterra (see Distribution section for P. tokehos sp. nov.); (30) Cat Tien, Dong Nai Province, Vietnam (Nguyen et al. 2009); and (41) Siracha, Chanthaburi, Thailand (Smith 1935). Numbered locations for the specimen-based localities are listed in Tables 1 and 6–9 and on the tree in Figure 2.

FIGURE 4 in Geographic structure of genetic variation in the Parachute Gecko Ptychozoon lionotum Annandale, 1905 across Indochina and Sundaland with descriptions of three new species

FIGURE 4. Discriminant function analysis showing the separation of P. lionotum s.s., P. cicakterbang sp. nov., P. kabkaebin sp. nov., and P. tokehos sp. nov. and the misplacement of FMNH 177548 as P. lionotum.

FIGURE 2 in Geographic structure of genetic variation in the Parachute Gecko Ptychozoon lionotum Annandale, 1905 across Indochina and Sundaland with descriptions of three new species

FIGURE 2. Maximum likelihood consensus tree topology depicting the phylogenetic relationships of species within the genus Ptychozoon. Numbers in parentheses refer to numbered localities in Figure 1.

FIGURE 6 in Geographic structure of genetic variation in the Parachute Gecko Ptychozoon lionotum Annandale, 1905 across Indochina and Sundaland with descriptions of three new species

FIGURE 6. Multivariate analyses of P. lionotum, P. cicakterbang sp. nov., P. kabkaebin sp. nov., and P. tokehos sp. nov. A. PCA ordination along PC 1 and PC2. B. DAPC showing complete separation of the 95% confidence ellipses. C. PCA ordination along PC1, PC2, and PC3.

FIGURE 7 in Geographic structure of genetic variation in the Parachute Gecko Ptychozoon lionotum Annandale, 1905 across Indochina and Sundaland with descriptions of three new species

FIGURE 7. Holotype of Ptychozoon cicakterbang sp. nov. LSUHC 10648 from Gunung Jerai, Kedah, Peninsular Malaysia. Photograph by L. L. Grismer.

opencc-by-4.0Jul 2019View details →

The population genetics of structural variants in grapevine domestication

The genome assembly: <a href="https://zenodo.org/api/files/988c0749-aec9-42fe-865e-b09b140e2068/Chardonnay.fa.fasta?versionId=86a512b8-12a6-4f4d-ac5d-acc26d74589f">Chardonnay.fa.fasta</a>  The gene annotation: <a href="https://zenodo.org/api/files/988c0749-aec9-42fe-865e-b09b140e2068/Chardonnay.annotation_sorted.gff.gz?versionId=2e5878bc-cf53-489b-ac71-2602f9ba4d2e">Chardonnay.annotation_sorted.gff.gz</a> The TE annotation: <a href="https://zenodo.org/api/files/988c0749-aec9-42fe-865e-b09b140e2068/Chardonnay.annotation_te_sorted.gff3.gz?versionId=95780497-e0e7-4a7b-8860-74072d7f7bb2">Chardonnay.annotation_te_sorted.gff3.gz</a>

FIGURE 14. Ptychozoon lionotum. A. NCSM 79473 in Geographic structure of genetic variation in the Parachute Gecko Ptychozoon lionotum Annandale, 1905 across Indochina and Sundaland with descriptions of three new species

FIGURE 14. Ptychozoon lionotum. A. NCSM 79473 from Tad Kuang Si, Luang Prabang Province, Laos. Photograph by B. L. Stuart. B. CAS 238865 Rakhine State, Myanmar. Photograph by Myanmar Herpetological Survey.

FIGURE 8 in Geographic structure of genetic variation in the Parachute Gecko Ptychozoon lionotum Annandale, 1905 across Indochina and Sundaland with descriptions of three new species

FIGURE 8. Color pattern variation in Ptychozoon cicakterbang sp. nov. A. LSUHC 9059 from Pulau Perhentian Besar, Tereng- ganu, Peninsular Malaysia. B. LSUHC 8709 from Pulau Perhentian Besar, Terengganu, Peninsular Malaysia. C. LSUDPC 3207 from Butterfly Park at Cameron Highlands, Pahang, Peninsular Malaysia. D. LSUHC 5539 from Pulau Sibu, Johor, Peninsular Malaysia.

opennotspecifiedApr 2016View details →

Fig. 4 in Genetic structure of Parnassius mnemosyne (Lepidoptera: Papilionidae) populations in the Carpathian Basin

Fig. 4 Results of Bayesian clustering analyses in P. mnemosyne. The bar plots of all individuals assuming K = 2 and K = 3. NM North Hungarian Mountains, TM Transdanubian Mountains, KÖR Körös region, BAEC Bereg–Apuseni–East Carpathian region

FIG. 4 in Nest-Site Fidelity and Sex-Biased Dispersal Affect Spatial Genetic Structure of Eastern Box Turtles (Terrapene carolina carolina) at Their Northern Range Edge

FIG. 4. Analysis of global structure along the river corridor from the first principal component of the sPCA represented by (A) interpolation of lagged principal scores showing genetic clines and (B) colors indicating individual scores. Coordinates have been deliberately omitted to deter poachers.

FIG. 3 in Nest-Site Fidelity and Sex-Biased Dispersal Affect Spatial Genetic Structure of Eastern Box Turtles (Terrapene carolina carolina) at Their Northern Range Edge

FIG. 3. Bubble plot showing the results of two-dimensional local spatial autocorrelation analysis for all Eastern Box Turtles (n ¼ 165) sampled in northwestern Michigan. Circles represent individuals and the size of the circle is proportional to the P-values from permutation testing, with large circles representing individuals that are significantly more related to their five nearest neighbors than expected (P, 0.05) based on a random distribution of genotypes. Figure shows the distribution of five genetic ''hotspots'' in relation to known nesting sites (NS) across the study area. Some distantly sampled individuals are omitted for figure clarity.

FIG. 2 in Nest-Site Fidelity and Sex-Biased Dispersal Affect Spatial Genetic Structure of Eastern Box Turtles (Terrapene carolina carolina) at Their Northern Range Edge

FIG. 2. Spatial genetic autocorrelograms of genetic correlation coefficients (r) as a function of distance for Eastern Box Turtles in northwestern Michigan. Plots represent (A) all individuals (n ¼ 165), (B) females only (n ¼ 104), and (C) males only (n ¼ 51). Dashed lines are permuted 95% confidence intervals across all data, and error bars are bootstrapped 95% confidence intervals within each distance class. Tables below graphs represent data for each distance class including the number of pairwise comparisons (n), the correlation coefficients (r), and the P-values (p) associated with bootstrap tests of significance for positive spatial genetic autocorrelation.

FIG. 1 in Nest-Site Fidelity and Sex-Biased Dispersal Affect Spatial Genetic Structure of Eastern Box Turtles (Terrapene carolina carolina) at Their Northern Range Edge

FIG. 1. Scatterplot showing the matrix of pairwise genetic distances and matrix of pairwise geographic distances for box turtles sampled along the river corridor. Warmer colors within the kernel density indicate higher densities of points. The line (slope ¼ 1.074727e–05; R2 ¼ 0.002992) shows the correlation trend.