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FIGURE 12 in Old World-New World differentiation of so-called " circumtropical " taxa: the case of rare genus Grimaldina Richard, 1892 (Branchiopoda: Cladocera: Macrothricidae)
FIGURE 12. Grimaldina freyi sp. nov., thoracic limbs of parthenogenetic female from Lake Hicpochee (N 26.79°, w 81.13°), Florida, U.S.A.: A, limb I, general view. B, its distal portion. C, limb II. D, distal armature of its gnathobase. E, limb III. F, its inner portion. G, its gnathobase. Scale bars 0.1 mm.
FIGURE 5 in Calls distinguish species of Antbirds (Aves: Passeriformes: Thamnophilidae) in the genus Pyriglena
FIGURE 5. Examples of Short Calls of Pyriglena populations. (A) Andean and Eye-browed Clades: castanoptera, Santa Cecilia Track, Zamora-Chinchipe Ecuador (XC 86464). (B) Tapajós Clade: similis, Rio Cristalino, Mato Grosso, Brazil (ISL BMW.117.011). (C) East Amazonian Clade: pernambucensis, Usina Serra Grande, Alagoas, Brazil (ML 127878). Atlantic Forest Clade: (D) atra, Campina, Bahia, Brazil (ISL MMC.C.057). (E) leucoptera, Itaberaba, Bahia, Brazil (ISL MMC.C.058). Examples represent central tendencies. Archive acronyms in Appendix.
FIGURE 2. A in Calls distinguish species of Antbirds (Aves: Passeriformes: Thamnophilidae) in the genus Pyriglena
FIGURE 2. A summarized maximum-likelihood phylogram showing relationships among fire-eye populations and taxa from 22 individuals. Black circles on nodes indicate both high posterior probabilities (> 0.95) and high bootstrap values (> 0.70) obtained under Bayesian and maximum-likelihood, respectively. Voucher tissue number is listed for each sample. Adapted from Maldonado-Coelho (2010).
FIGURE 8 in Old World-New World differentiation of so-called " circumtropical " taxa: the case of rare genus Grimaldina Richard, 1892 (Branchiopoda: Cladocera: Macrothricidae)
FIGURE 8. Grimaldina freyi sp. nov., parthenogenetic female from Lake Hicpochee (N 26.79°, w 81.13°), Florida, U.S.A.: A, lateral view. B, head. C, labrum. D, armature of ventral and posterior margin of valve. E, setae at anteroventral valve portion. F–G, setae at ventral margin of valve in its anterior and posterior portion. H, armature of posteroventral portion of valve. I, posterior margin of valve. J, postabdomen. K, its preanal margin. L, distal portion of postabdomen. M–N, postabdominal claw in outer and inner view. Scale bars 0.1 mm
FIGURE 4 in Calls distinguish species of Antbirds (Aves: Passeriformes: Thamnophilidae) in the genus Pyriglena
FIGURE 4. Spectrograms of songs of Pyriglena populations. (A) pacifica, Tumbes Reserve Zone, Tumbes, Peru (ISL KJZ.120.028). (B) castanoptera San José de Lourdes, Cajamarca, Peru (ISL DFL.007.007). (C) marcapatensis, Cerro Saucipata, Cusco, Peru (XC 23005). (D) hellmayri 35 km N of Caranavi, La Paz, Bolivia (ML 33740). (E) maura Perseverancia, Santa Cruz, Bolivia (ISL TAP.026.001). (F) maura Chapada dos Guimarães, Mato Grosso, Brazil (ISL KJZ.074.029). (G) similis Rio Cristalino, Mato Grosso, Brazil (ISL KJZ.043.009). (H) interposita Caxiuanã, Pará, Brazil (ISL BMW.202.036). (I) leuconota Paragominas, Pará, Brazil (ISL BMW.098.034). (J) pernambucensis Reserva Florestal de Murici, Alagoas, Brazil (ISL KJZ.080.031). (K) atra Santa Luzia do Itanhi, Sergipe, Brazil (ISL BMW.157.023). (L) leucoptera precise location unknown, Rio Grande do Sul, Brazil (ISL TAP.023.009). Songs of picea were similar to those of castanoptera. Examples represent central tendencies. Archive acronyms in Appendix.
FIGURES 35–36 in new species of Miogryllus Saussure, 1877 and new record of Miogryllus piracicabensis Piza, 1960 (Orthoptera: Gryllidae) from State of Rio Grande do Sul, Brazil, with calling song and chromosome complement
FIGURES 35–36. Karyotype of Miogryllus. 35—Miogryllus itaquiensis n. sp.; 36—Miogryllus piracicabensis Piza, 1960.
FIGURES 17–20 in new species of Miogryllus Saussure, 1877 and new record of Miogryllus piracicabensis Piza, 1960 (Orthoptera: Gryllidae) from State of Rio Grande do Sul, Brazil, with calling song and chromosome complement
FIGURES 17–20. Calling songs of Miogryllus itaquiensis n. sp. and Miogryllus piracicabensis Piza, 1960. 17–18—Holotype oscillogram and spectrogram, respectively; 19–20— oscillogram and spectrogram of Miogryllus piracicabensis.
FIGURES 12–16 in new species of Miogryllus Saussure, 1877 and new record of Miogryllus piracicabensis Piza, 1960 (Orthoptera: Gryllidae) from State of Rio Grande do Sul, Brazil, with calling song and chromosome complement
FIGURES 12–16. Morphological characteristics of Miogryllus itaquiensis n. sp. paratypes. 12—male right tegmen; 13–14—stridulatory file; 15—female subgenital plate, cerci and ovipositor; 16—female supranal plate.
FIGURES 29–34 in new species of Miogryllus Saussure, 1877 and new record of Miogryllus piracicabensis Piza, 1960 (Orthoptera: Gryllidae) from State of Rio Grande do Sul, Brazil, with calling song and chromosome complement
FIGURES 29–34. Genitalia, right tegmen and ovipositor of Miogryllus piracicabensis Piza, 1960. 29–31—phallic sclerites, dorsal, ventral and lateral view, respectively; 32—male right tegmen; 33—supranal plate, cerci and ovipositor; 34—subgenital plate, cerci and ovipositor. Conventions: MLPs—Main Lobe of Pseudepiphallus; Ps.Ap.—Pseudepiphallic Apodeme; Ect.F—Ectophallic Fold; Arc—Ectophallic Arc; Ps.P—Pseudoepiphallic Paramere; Ps.Ap—Pseudepiphallic Apodeme; End.C—Endophallic Cavity; R—Ramus.
FIGURES 23–28 in new species of Miogryllus Saussure, 1877 and new record of Miogryllus piracicabensis Piza, 1960 (Orthoptera: Gryllidae) from State of Rio Grande do Sul, Brazil, with calling song and chromosome complement
FIGURES 23–28. Male morphological characteristics of Miogryllus piracicabensis Piza, 1960. 23, 24, 25—habitus after alcohol fixation, in dorsal, ventral and lateral views, respectively; 26—head, lateral view; 27—supranal plate; 28—subgenital plate.
FIGURES 3–11 in new species of Miogryllus Saussure, 1877 and new record of Miogryllus piracicabensis Piza, 1960 (Orthoptera: Gryllidae) from State of Rio Grande do Sul, Brazil, with calling song and chromosome complement
FIGURES 3–11. Morphological characteristics of Miogryllus itaquiensis n. sp. holotype. 3–5—habitus after alcohol fixation, in dorsal, ventral and lateral views, respectively; 6—head, lateral view; 7—supranal plate; 8—subgenital plate; 9–11—phallic sclerites, ventral, dorsal and lateral view, respectively. Conventions: MLPs—main lobe of pseudepiphallus; Ect.F—Ectophallic Fold; Ect.Ap.—Ectophallic Apodeme; Arc—Ectophallic Arc; Ps.P—Pseudoepiphallic Paramere; Ps.Ap—Pseudepiphallic Apodeme; End.C—Endophallic Cavity; R—Ramus.
FIGURE 1 in The advertisement call of Dendropsophus novaisi (Bokermann, 1968) (Anura: Hylidae: Dendropsophinae)
FIGURE 1. Advertisement call of Dendropsophus novaisi (CHUFRB0489). (A) Male Dendropsophus novaisi photographed in Cruz das Almas Municipality, State of Bahia, Brazil. The species is distinguished from similar species in the Dendropsophus marmoratus group by its relatively shorter hindlimbs, by the presence of complete dark transverse bars on thighs, by a generally more robust body and by the length and pigmentation of webbing between fingers (not shown); (B) Oscillogram of five calls emitted by two neighboring males; (C) Oscillogram of a single call. Note that the call is formed by a single multipulsed note; (D) Spectrogram of the same call shown in (C); (E) Power spectrum showing fundamental and dominant frequencies of the same call. Air temperature at time of recording 24.0 °C.
Annotated audio of the loud nest calls of brooding female rooks in five colonies with individual-level identification
<p>This data accompanies our article entitled '<strong>Individual, but not nest cluster or colonial, vocal signatures in the nest call of female rooks (Corvus frugilegus)</strong>'.</p> <p>The dataset.zip archive contains audio and annotations obtained from recording five different colonies of rooks during the breeding season. The audio was compressed losslessly to .flac files from the original wav format to save storage space. The annotations are the corresponding .txt files containing timestamps and individual identity for each call used in the article, intended for viewing in Audacity (open the flac files, then import the annotation file with the same name). Finally, the tabelau_vocs.tsv file is essentially all the .txt files aggregated for the analysis. </p> <p>Note that to run the analysis, either the .flac audio files must be converted back to .wav files, or the tableau_vocs.tsv file should be edited to point at the .flac files instead of the original .wav files.</p> <p>The intermediate_results.zip archive contains all intermediate results used in the analysis. These are meant to be used with the provided .R scripts in the same archive, which reproduce the statistical analysis and the figures in the article and supplementary.</p> <p>Finally, the supplementary.zip archive contains the supplementary materials provided with the article, including the supplementary.pdf file containing additional analyses, and the example_nest_calls folder containing example of nest calls from various females in the five colonies.</p> <p>The example nest calls are provided at various stages of processing: raw audio extracted from the spectrogram (the .wav files without suffixes), high-pass filter above 100 Hz (.wav files with the 'filtered' suffix), audio with all the processing steps including the spectral gating-based denoising, pre-amplification, and centering (.wav files with the 'processed' suffix), and spectrograms used as inputs for the analysis after dB-scaling and Mel frequenct-scaling (.png files).</p> <p> </p> <p>The rook_vocal_signatures-main.zip archive contains all the code as of the date of submission (August 21st, 2024) used in the article. This was added purely to anonymise the submission as much as possible. Up-to-date code should still be consulted from the link above (will be added after the paper is accepted.</p>
Artifact for "Efficient Construction of Practical Python Call Graphs with Entity Knowledge Base"
<p>This is the artifact for the paper entitled "Efficient Construction of Practical Python Call Graphs with Entity Knowledge Base"</p>
FIGURE 3 in Tadpole and advertisement call of Physalaemus erythros Caramaschi, Feio & Guimarães-Neto, 2003 (Amphibia, Anura, Leiuperidae)
FIGURE 3. (A) Wave form, (B) wave form of a single note, (C) spectrogram and (D) power spectrum of the advertisement call of Physalaemus erythros; recorded at Ouro Preto, Minas Gerais, Brazil on 10 October 2006, 7:38 PM. Air temperature 18ºC, water temperature 20ºC. Calls recorded from unvouchered specimen.
FIGURE 2 in Tadpole and advertisement call of Physalaemus erythros Caramaschi, Feio & Guimarães-Neto, 2003 (Amphibia, Anura, Leiuperidae)
FIGURE 2. Tadpole assigned to Physalaemus erythros, stage 37 of Gosner (1960): (A) dorsal view; (B) ventral view; (C) lateral view (scale = 5mm); (D) oral disc (scale = 1mm).
FIGURE 1 in Tadpole and advertisement call of Physalaemus erythros Caramaschi, Feio & Guimarães-Neto, 2003 (Amphibia, Anura, Leiuperidae)
FIGURE 1: Map showing the geographical distribution of the three species of thePhysalaemus deimaticus species group, at Minas Gerais, southeastern Brazil. Cross: Physalaemus deimaticus; Triangle: Physalaemus erythros; Star: Physalaemus rupestris.
FIGURE 1 in Advertisement and aggressive calls of Ischnocnema oea (Heyer, 1984) (Anura, Brachycephalidae)
FIGURE 1. Ischnocnema oea: spectrogram and power spectrum with window function Hann, amplitude logarithmic, window size 512 samples, overlap 99%. (A) Oscillogram, (B) spectrogram and (C) power spectrum of one advertisement call. (D) Oscillogram, (E) spectrogram and (F) power spectrum of one aggressive call.
FIGURE 1 in The advertisement call of the toad Rhinella humboldti (Bufonidae)
FIGURE 1. Graphic representations of an advertisement call of the toad Rhinella humboldti. Upper: An oscillogram showing four pulses per note; middle: oscillogram of a whole call with 79 notes and a calling male; below: spectrogram (left) and power spectrum (right) of the call.
FIGURE 1 in On the advertisement call of Dermatonotus muelleri (Boettger, 1885) (Anura, Microhylidae)
FIGURE 1. Advertisement call of two Dermatonotus muelleri males. A- Audiospectrogram (above) and corresponding oscillogram (below) of an entire call. Record file: Dermaton_muelleGurinhMG9aAAGm60s. October 17, 2012; 21:36 h. FFT = 512. B- Audiospectrogram (above) and corresponding oscillogram (below) of a short section at the mid portion of the call emphasizing the pulse structure. Record file: Dermaton_muelleGurinhMG20bIH_AAGmt29.7s. October 17, 2012; 21:59 h. FFT = 216. In both air = 21 ºC, water = 26 ºC. Records from Gurinhatã, region of the Triângulo Mineiro, state of Minas Gerais, Brazil.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.