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Three-color whole cell LLSM imaging data of ER, H2B, and Mito over 1000 time points during mitosis (H2B channel)
<p>This dataset includes the three-color whole cell lattice light-sheet microscopy (LLSM) data of ER, H2B, and Mitochondia over 1000 time points at 6 sec intervals in a HeLa cell stably expressing calnexin-mEmerald, H2B-mCherry and Mito-Halo during mitosis (only H2B channel here due to the file size restriction, other channels can be found in the same depository with different DOI), which was used to demonstrate SiS-rDL denoising algorithm in our Nature Biotechnology paper (DOI: 10.1038/s41587-022-01471-3). This dataset can be used for non-commercial purposes with proper citations of our NBT paper.</p>
Data from: Identification of a minority population of LMO2+ breast cancer cells that integrate into the vasculature and initiate metastasis.
<p>Metastasis is responsible for the majority of breast cancer-related deaths, however, identifying the cellular determinants of metastasis has remained challenging. Here, we identified a minority population of immature THY1+/VEGFA+ tumor epithelial cells in human breast tumor biopsies that display angiogenic features and are marked by the expression of the oncogene, LMO2. Higher abundance of LMO2+ basal cells correlated with tumor endothelial content and predicted poor distant recurrence-free survival in patients. Using MMTV-PyMT/Lmo2CreERT2 mice, we demonstrated that Lmo2 lineage-traced cells integrate into the vasculature and have a higher propensity to metastasize. LMO2 knockdown in human breast tumors reduced lung metastasis by impairing intravasation, leading to a reduced frequency of circulating tumor cells. Mechanistically, we find that LMO2 binds to STAT3 and is required for STAT3 activation by TNFα and IL6. Collectively, our study identifies a population of metastasis-initiating cells with angiogenic features and establishes the LMO2-STAT3 signaling axis as a therapeutic target in breast cancer metastasis.</p>
VZV-specific T cell clonotypes following recovery from herpes zoster
<p>These are TRB sequences, obtained from Adaptive Biotechnology v4b Immunoseq assay, for PBMC and skin biopsy (rash site and uninvolved contralateral site) samples over a time-course (day 45, day 90, day 360) following the onset of herpes zoster in one human subject. Additionally, HLA-A*02:01- tetramer-sorted repertoires were obtained representing varicella-zoster virus specific CD8 T cell clonotypes. </p>
Flight demonstration of a miniature atomic scalar magnetometer based on a microfabricated rubidium vapor cell
<p>Data acquired by the Miniature Absolute Scalar Magnetometer (MASM) on the low-flying sounding rocket of the Twin Rockets to Investigate Cusp Electrodynamics 2 (TRICE-2) mission. The data columns are as follows:</p> <p>epoch time: CDF Epoch Time</p> <p>time: year, month, day, hour, minute, second</p> <p>lfreq [Hz]: Larmor frequency in Hertz</p> <p>Bt [nT]: Measured total magnetic field in nano-Tesla</p> <p>Btm [nT]: Total magnetic field of the IGRF model in nano-Tesla</p> <p>Bxm [nT]: Magnetic field Bx-component of the IGRF model in ECEF coordinates and nano-Tesla</p> <p>Bym [nT]: Magnetic field By-component of the IGRF model in ECEF coordinates and nano-Tesla</p> <p>Bzm [nT]: Magnetic field Bz-component of the IGRF model in ECEF coordinates and nano-Tesla</p> <p>flight time: Flight time with respect to launch in seconds</p> <p>ecef x pos [m]: ECEF X coordinate in meters</p> <p>ecef y pos [m]: ECEF Y coordinate in meters</p> <p>ecef z pos [m]: ECEF Z coordinate in meters</p> <p>ecef x vel [m/s]: ECEF X velocity in meters per second</p> <p>ecef y vel [m/s]: ECEF Y velocity in meters per second</p> <p>ecef z vel [m/s]: ECEF Z velocity in meters per second</p> <p>lat [deg]: Geopgraphic latitude in degrees</p> <p>lon [deg]: Geographics longitude in degrees</p> <p>alt [km]: Altitude in kilometers</p> <p>vcsel temp: VCSEL temperature in engineering units</p> <p>gas cell temp: Rubidium vapor cell temperature in engineering units</p> <p>bx mag: Magnetic field Bx-component measured by the mission's science magnetometer in ECEF coordinates and nano-Tesla</p> <p>by mag: Magnetic field By-component measured by the mission's science magnetometer in ECEF coordinates and nano-Tesla</p> <p>bz mag: Magnetic field Bz-component measured by the mission's science magnetometer in ECEF coordinates and nano-Tesla</p> <p>bt mag: Total magnetic field measured by the mission's science magnetometer in ECEF coordinates and nano-Tesla</p> <p>btf mag: Filtered total magnetic field measured by the mission's science magnetometer in ECEF coordinates and nano-Tesla</p>
Text-fig. 7. Scanning electron micrographs (a, b, d, e, g–k), X-ray microtomographic orthoslices (c) and synchrotron radiation X-ray tomographic microscopy orthoslices (f) of fruits and endocarps of uncertain affinity from Zliv-Řídká Blana locality. a–c: Trebecenia sarcocalis, a – tricarpellate fruit, no. NM-F 3637, b – fruits supported by pentamerous and persistent calyx, no. NMF 3637, c – fruit almost circular in transverse section, no. NM-F 3637; d: Taxon 17, small fruit with slightly sunken stylar region, no. NM-F 3201; e: Taxon 19, spherical fruit, the fruit wall composed of large isodiametric, thick walled cells, no. NM-F 3181; f: Taxon 19, single-seeded fruit, no. NM-F 3621; g: Taxon 20, syncarpous, multicarpellate fruit of ten carpels, no. NM-F 3200; h: Taxon 22, syncarpous, multicarpellate fruit of seven carpels, no. NM-F 3159; i: cf. Sabia menispermoides, endocarp of drupaceous fruits, no. NM-F 4624; j: Taxon 25, endocarp triangular in cross-section, no. NM-F 3218; k: Taxon 24, endocarp spherical in cross-section with a distinctly ribbed and foveolate surface, no. NM-F 3217. in Plant Mesofossils From The Late Cretaceous Klikov Formation, The Czech Republic
Text-fig. 7. Scanning electron micrographs (a, b, d, e, g–k), X-ray microtomographic orthoslices (c) and synchrotron radiation X-ray tomographic microscopy orthoslices (f) of fruits and endocarps of uncertain affinity from Zliv-Řídká Blana locality. a–c: Trebecenia sarcocalis, a – tricarpellate fruit, no. NM-F 3637, b – fruits supported by pentamerous and persistent calyx, no. NMF 3637, c – fruit almost circular in transverse section, no. NM-F 3637; d: Taxon 17, small fruit with slightly sunken stylar region, no. NM-F 3201; e: Taxon 19, spherical fruit, the fruit wall composed of large isodiametric, thick walled cells, no. NM-F 3181; f: Taxon 19, single-seeded fruit, no. NM-F 3621; g: Taxon 20, syncarpous, multicarpellate fruit of ten carpels, no. NM-F 3200; h: Taxon 22, syncarpous, multicarpellate fruit of seven carpels, no. NM-F 3159; i: cf. Sabia menispermoides, endocarp of drupaceous fruits, no. NM-F 4624; j: Taxon 25, endocarp triangular in cross-section, no. NM-F 3218; k: Taxon 24, endocarp spherical in cross-section with a distinctly ribbed and foveolate surface, no. NM-F 3217.
Text-fig. 6. Scanning electron micrographs of seeds of ericalean affinity (a–d) and seeds of uncertain affinity (e–i) from Zliv-Řídká Blana locality. a: Protovisnea sp. 1, rounded seed with the narrow elongate seed cavity flanked by two bulging regions of larger cells, no. NM-F 3177; b: Protovisnea sp. 2, angular seed with the narrow elongate seed cavity flanked by two bulging regions of larger cells, no. NM-F 3179; c, d: Eurya crassitesta, one seed split into two parts, no. NM-F 3211, c – surface cells of the seed coat are palisade, d – cross-section of the seed; e: Nympheaceae sp. 1, seed, no. NM-F 3636; f: Nympheaceae sp. 2, seed, no. NM-F 4634; g: Klikovispermum sp.1, seeds with irregular outline and smooth outer surface, no. NM-F 3203; h: Klikovispermum malechii, seed with an orange-segment shape, no. NM-F 3299; i: Taxon 35, seed, no. NM-F 3236. in Plant Mesofossils From The Late Cretaceous Klikov Formation, The Czech Republic
Text-fig. 6. Scanning electron micrographs of seeds of ericalean affinity (a–d) and seeds of uncertain affinity (e–i) from Zliv-Řídká Blana locality. a: Protovisnea sp. 1, rounded seed with the narrow elongate seed cavity flanked by two bulging regions of larger cells, no. NM-F 3177; b: Protovisnea sp. 2, angular seed with the narrow elongate seed cavity flanked by two bulging regions of larger cells, no. NM-F 3179; c, d: Eurya crassitesta, one seed split into two parts, no. NM-F 3211, c – surface cells of the seed coat are palisade, d – cross-section of the seed; e: Nympheaceae sp. 1, seed, no. NM-F 3636; f: Nympheaceae sp. 2, seed, no. NM-F 4634; g: Klikovispermum sp.1, seeds with irregular outline and smooth outer surface, no. NM-F 3203; h: Klikovispermum malechii, seed with an orange-segment shape, no. NM-F 3299; i: Taxon 35, seed, no. NM-F 3236.
Text-fig. 2. Scanning electron micrographs of non-angiosperm remains (a–d) and insect remains (e–f) from Zliv-Řídká Blana locality. a: Eopolytrichium sp. small leafy shoot, no. NM-F 3631; b: Taxon 1, single tip of a young fern frond with circinate vernation, no. NM-F 4130; c: Taxon 2, fern with simple leaves and circinate vernation, no. NM-F 3459; d: Pagiophyllum sp., small needle-like leaf, no. NM-F 4132; e: Microcarpolithes hexagonalis, a faecal pellet/coprolite with subcylindrical shape, no. NMF 4520; f: Palaeoaldrovanda splendens, pieces of compact walls formed by rectangular cells, no. NM-F 3237. in Plant Mesofossils From The Late Cretaceous Klikov Formation, The Czech Republic
Text-fig. 2. Scanning electron micrographs of non-angiosperm remains (a–d) and insect remains (e–f) from Zliv-Řídká Blana locality. a: Eopolytrichium sp. small leafy shoot, no. NM-F 3631; b: Taxon 1, single tip of a young fern frond with circinate vernation, no. NM-F 4130; c: Taxon 2, fern with simple leaves and circinate vernation, no. NM-F 3459; d: Pagiophyllum sp., small needle-like leaf, no. NM-F 4132; e: Microcarpolithes hexagonalis, a faecal pellet/coprolite with subcylindrical shape, no. NMF 4520; f: Palaeoaldrovanda splendens, pieces of compact walls formed by rectangular cells, no. NM-F 3237.
Text-fig. 10. Platanoxylon cf. haydenii, a, e, h: UF 279-34470; b, c, d, f g: UF 279-34469. a, b: Diffuse porous wood with vessels solitary and in small multiples, which are mostly tangential or oblique, diffuse and diffuse-in-aggregates axial parenchyma., TS. c–e: Scalariform perforation plates. f, g: Opposite intervessel pits, TLS. h: Two size classes of rays, TLS. Platanus sp., UF 279- 24552. i: Predominantly solitary vessels, diffuse and diffuse-in-aggregates parenchyma, growth ring boundary distinct, noded rays, TS. j: Simple perforation plates (PP), RLS. k: Body of ray with procumbent ray cells, RLS. l: Scalariform perforation plate, RLS. m: Rays of two sizes, wide rays>10-seriate, TLS. Scale bars: 200 µm in a, b, h, i, m; 100 µm in j, k: 50 µm in c, d, e, f, l. in A Diverse Assemblage Of Late Eocene Woods From Oregon, Western Usa
Text-fig. 10. Platanoxylon cf. haydenii, a, e, h: UF 279-34470; b, c, d, f g: UF 279-34469. a, b: Diffuse porous wood with vessels solitary and in small multiples, which are mostly tangential or oblique, diffuse and diffuse-in-aggregates axial parenchyma., TS. c–e: Scalariform perforation plates. f, g: Opposite intervessel pits, TLS. h: Two size classes of rays, TLS. Platanus sp., UF 279- 24552. i: Predominantly solitary vessels, diffuse and diffuse-in-aggregates parenchyma, growth ring boundary distinct, noded rays, TS. j: Simple perforation plates (PP), RLS. k: Body of ray with procumbent ray cells, RLS. l: Scalariform perforation plate, RLS. m: Rays of two sizes, wide rays>10-seriate, TLS. Scale bars: 200 µm in a, b, h, i, m; 100 µm in j, k: 50 µm in c, d, e, f, l.
Text-fig. 9. Wataria kvacekii sp. nov., UF 279-24556. a: Wood ring-porous, earlywood with 2–3 rows of wide pores, vessels solitary and in radial multiples of 2, axial parenchyma scanty vasicentric and some apotracheal diffuse-in-aggregates, TS. b: Series of vessel elements with simple perforations, axial parenchyma strands adjacent to vessels, RLS. c: Alternate intervessel pitting, vessel element end walls horizontal, RLS. d: Vessel-axial parenchyma pitting similar to intervessel pitting, RLS. e, f: Rays with tile cells, storied axial parenchyma, some strands chambered crystalliferous, TLS. g: Detail of ray, TLS. h: Storied imperforate elements. Scale bars: 200 µm in a; 100 µm in b, e; 50 µm in c, d, f, h; 20 µm in g. in A Diverse Assemblage Of Late Eocene Woods From Oregon, Western Usa
Text-fig. 9. Wataria kvacekii sp. nov., UF 279-24556. a: Wood ring-porous, earlywood with 2–3 rows of wide pores, vessels solitary and in radial multiples of 2, axial parenchyma scanty vasicentric and some apotracheal diffuse-in-aggregates, TS. b: Series of vessel elements with simple perforations, axial parenchyma strands adjacent to vessels, RLS. c: Alternate intervessel pitting, vessel element end walls horizontal, RLS. d: Vessel-axial parenchyma pitting similar to intervessel pitting, RLS. e, f: Rays with tile cells, storied axial parenchyma, some strands chambered crystalliferous, TLS. g: Detail of ray, TLS. h: Storied imperforate elements. Scale bars: 200 µm in a; 100 µm in b, e; 50 µm in c, d, f, h; 20 µm in g.
Text-fig. 8. Pterocaryoxylon sp., a–c, e: UF 279-85024; d, f: UF 279-24551. a, b: Wood semi-ring-porous, vessels solitary and in short radial multiples, axial parenchyma scanty vasicentric, marginal, and in narrow lines, TS. c: Crowded alternate intervessel pitting, simple perforation plate (PP), TLS. d: Vessel-axial parenchyma pitting similar to intervessel pitting, RLS. e: Rays mostly 1–3 cells wide, occasionally 4 cells, uniseriate rays probably mostly square to upright cells, TLS. f: Rays heterocellular, body cells procumbent. Scale bars: 200 µm in a, b; 100 µm in e, f; 50 µm in c; 20 µm in d. in A Diverse Assemblage Of Late Eocene Woods From Oregon, Western Usa
Text-fig. 8. Pterocaryoxylon sp., a–c, e: UF 279-85024; d, f: UF 279-24551. a, b: Wood semi-ring-porous, vessels solitary and in short radial multiples, axial parenchyma scanty vasicentric, marginal, and in narrow lines, TS. c: Crowded alternate intervessel pitting, simple perforation plate (PP), TLS. d: Vessel-axial parenchyma pitting similar to intervessel pitting, RLS. e: Rays mostly 1–3 cells wide, occasionally 4 cells, uniseriate rays probably mostly square to upright cells, TLS. f: Rays heterocellular, body cells procumbent. Scale bars: 200 µm in a, b; 100 µm in e, f; 50 µm in c; 20 µm in d.
Text-fig. 7. Hamamelidoxylon crystalliferum sp. nov., UF 279-34464. a: Diffuse porous wood with exclusively solitary vessels, tending to be angular in outline, TS. b: Growth ring boundary, marked by radially narrowed fibers, latewood vessels narrower than earlywood vessels of the next ring, fibers thick-walled, no axial parenchyma visible, TS. c: Scalariform intervessel pits in narrow vessel (left), fibers with distinctly bordered pits, TLS. d: Scalariform perforation plate, tyloses (T) formation from marginal ray cell, TLS. e: Scalariform perforation plates with fewer than 15 bars (PP), RLS. f: Vessel-ray parenchyma pits with in A Diverse Assemblage Of Late Eocene Woods From Oregon, Western Usa
Text-fig. 7. Hamamelidoxylon crystalliferum sp. nov., UF 279-34464. a: Diffuse porous wood with exclusively solitary vessels, tending to be angular in outline, TS. b: Growth ring boundary, marked by radially narrowed fibers, latewood vessels narrower than earlywood vessels of the next ring, fibers thick-walled, no axial parenchyma visible, TS. c: Scalariform intervessel pits in narrow vessel (left), fibers with distinctly bordered pits, TLS. d: Scalariform perforation plate, tyloses (T) formation from marginal ray cell, TLS. e: Scalariform perforation plates with fewer than 15 bars (PP), RLS. f: Vessel-ray parenchyma pits with
Text-fig. 5. Lithocarpoxylon ashwillii sp. nov., UF 279-24544. a, b: Semi-ring porous wood, exclusively solitary vessels in a radial/ diagonal arrangement, diffuse axial parenchyma, TS. c: Homocellular rays composed of procumbent cells; vasicentric tracheids; vessel elements with simple perforation plates (PP), TLS. d: Vessel-ray parenchyma pits (VRP) with reduced borders, vertical, RLS. e: Crystalliferous axial parenchyma strand (C) with a single crystal per chamber; ray with procumbent cells, RLS. f: Aggregate ray (right) composed of loosely associated 1–2-seriate rays, TLS. g: Uniseriate rays, thin-walled tyloses in vessels, vasicentric tracheids (VT). Lithocarpoxylon sp., UF 279-84864. h, i: Semi-ring porous wood, exclusively solitary vessels in radial arrangement. j: Aggregate ray and uniseriate rays. k: Scalariform perforation plate with fewer than 10 bars. l: Vessel-ray parenchyma pits with reduced borders to simple, vertical. Scale bars: 200 µm in a, b, f, h, j; 100 µm in c, i; 50 µm in d. e; 20 µm in k, l. in A Diverse Assemblage Of Late Eocene Woods From Oregon, Western Usa
Text-fig. 5. Lithocarpoxylon ashwillii sp. nov., UF 279-24544. a, b: Semi-ring porous wood, exclusively solitary vessels in a radial/ diagonal arrangement, diffuse axial parenchyma, TS. c: Homocellular rays composed of procumbent cells; vasicentric tracheids; vessel elements with simple perforation plates (PP), TLS. d: Vessel-ray parenchyma pits (VRP) with reduced borders, vertical, RLS. e: Crystalliferous axial parenchyma strand (C) with a single crystal per chamber; ray with procumbent cells, RLS. f: Aggregate ray (right) composed of loosely associated 1–2-seriate rays, TLS. g: Uniseriate rays, thin-walled tyloses in vessels, vasicentric tracheids (VT). Lithocarpoxylon sp., UF 279-84864. h, i: Semi-ring porous wood, exclusively solitary vessels in radial arrangement. j: Aggregate ray and uniseriate rays. k: Scalariform perforation plate with fewer than 10 bars. l: Vessel-ray parenchyma pits with reduced borders to simple, vertical. Scale bars: 200 µm in a, b, f, h, j; 100 µm in c, i; 50 µm in d. e; 20 µm in k, l.
Text-fig. 1. Pistacia terrazasae sp. nov., a: UF 279-85025; b–i: UF 279-24545. a: Ring-porous wood with widely spaced solitary earlywood vessels; latewood vessels in radial multiples of 4 or more and in clusters, TS. b: Growth ring boundary, fiber walls thin to thick, TS. c: Simple perforation plates, alternate intervessel pits, helical thickenings in vessels, TLS. d: Multiseriate rays to 4-seriate, tyloses in vessels, helical thickenings throughout body of vessel element, and alternate intervessel pitting, TLS. e: Vessel-ray parenchyma pitting with reduced borders, oval in outline, RLS. f: Marginal row of upright cells, one inflated and crystalliferous, procumbent body cells, RLS. g: Multiseriate rays mostly 3-seriate, occasionally 4-seriate, uniseriate rays usually <10 cells tall, TLS. h: Ray with enlarged crystalliferous marginal cell, to left of C, TLS. i: Ray with canal, TLS. Scale bars: 200 µm in a, g; 100 µm in b, d, h; 50 µm in c, i; 20 µm in e, f. in A Diverse Assemblage Of Late Eocene Woods From Oregon, Western Usa
Text-fig. 1. Pistacia terrazasae sp. nov., a: UF 279-85025; b–i: UF 279-24545. a: Ring-porous wood with widely spaced solitary earlywood vessels; latewood vessels in radial multiples of 4 or more and in clusters, TS. b: Growth ring boundary, fiber walls thin to thick, TS. c: Simple perforation plates, alternate intervessel pits, helical thickenings in vessels, TLS. d: Multiseriate rays to 4-seriate, tyloses in vessels, helical thickenings throughout body of vessel element, and alternate intervessel pitting, TLS. e: Vessel-ray parenchyma pitting with reduced borders, oval in outline, RLS. f: Marginal row of upright cells, one inflated and crystalliferous, procumbent body cells, RLS. g: Multiseriate rays mostly 3-seriate, occasionally 4-seriate, uniseriate rays usually <10 cells tall, TLS. h: Ray with enlarged crystalliferous marginal cell, to left of C, TLS. i: Ray with canal, TLS. Scale bars: 200 µm in a, g; 100 µm in b, d, h; 50 µm in c, i; 20 µm in e, f.
Text-fig. 3. SRXTM images of Miranthus elegans gen. et sp. nov.; Mira locality, Portugal. a, b: Volume renderings of flower bud in two different lateral views showing long pedicel, distinct calyx (ca) with almost equiaxial epidermal cells and corolla (co) with nearly smooth surface. c–e: Transverse sections (c, orthoslice xy1500; d, orthoslice xy1760; e, orthoslice xy1850) through flower bud at levels below the anthers showing stamen filaments (yellow) opposite the corolla lobes (co) and smaller staminodes (orange) in Early Flowers Of Primuloid Ericales From The Late Cretaceous Of Portugal And Their Ecological And Phytogeographic Implications
Text-fig. 3. SRXTM images of Miranthus elegans gen. et sp. nov.; Mira locality, Portugal. a, b: Volume renderings of flower bud in two different lateral views showing long pedicel, distinct calyx (ca) with almost equiaxial epidermal cells and corolla (co) with nearly smooth surface. c–e: Transverse sections (c, orthoslice xy1500; d, orthoslice xy1760; e, orthoslice xy1850) through flower bud at levels below the anthers showing stamen filaments (yellow) opposite the corolla lobes (co) and smaller staminodes (orange)
Text-fig. 2. Celtis popsii sp. nov., UF 279-34460. a: Growth ring with earlywood of multiple rows of vessels solitary and in radial multiples; latewood vessels in wavy tangential bands, TS. b: Growth ring boundary, latewood vessels in multiples with axial parenchyma confluent, TS. c: Simple perforation plates, alternate intervessel pits, polygonal in outline, TLS. d: Vessel-ray parenchyma pits to right of VRP, oval in outline, with slightly reduced borders, RLS. e: Rays tending to two sizes, some multiseriate rays with distinct sheath cells, multiseriate rays usually with 1 marginal row of square to upright cells, occasionally with 4 or more; uniseriate rays less than 10 cells high, TLS. f: Detail of multiseriate ray with distinct sheath cells, vessel element end walls, TLS. Scale bars: 200 µm in a, e; 100 µm in b; 50 µm in c, f; 20 µm in d. in A Diverse Assemblage Of Late Eocene Woods From Oregon, Western Usa
Text-fig. 2. Celtis popsii sp. nov., UF 279-34460. a: Growth ring with earlywood of multiple rows of vessels solitary and in radial multiples; latewood vessels in wavy tangential bands, TS. b: Growth ring boundary, latewood vessels in multiples with axial parenchyma confluent, TS. c: Simple perforation plates, alternate intervessel pits, polygonal in outline, TLS. d: Vessel-ray parenchyma pits to right of VRP, oval in outline, with slightly reduced borders, RLS. e: Rays tending to two sizes, some multiseriate rays with distinct sheath cells, multiseriate rays usually with 1 marginal row of square to upright cells, occasionally with 4 or more; uniseriate rays less than 10 cells high, TLS. f: Detail of multiseriate ray with distinct sheath cells, vessel element end walls, TLS. Scale bars: 200 µm in a, e; 100 µm in b; 50 µm in c, f; 20 µm in d.
Text-fig. 3. Cercidiphyllum cf. alalongum R.A.SCOTT et E.A.WHEELER, UF 279-24543. a, b: Diffuse-porous wood, exclusively solitary vessels, axial parenchyma rare, thick-walled fibers, TS. c: Scalariform perforation plate with more than 30 bars, RLS. d: Helical thickenings (HT) in vessel element tip, RLS. e: Opposite to scalariform intervessel pits, RLS. f, g: Heterocellular rays 1–2 cells wide, occasionally uniseriate and biseriate portions of similar width, TLS. h: Ray with alternating rows of procumbent and upright (-square) cells, RLS. Scale bars: 200 µm in a; 100 µm in b, f; 50 µm in c, g, h; 20 µm in d, e. in A Diverse Assemblage Of Late Eocene Woods From Oregon, Western Usa
Text-fig. 3. Cercidiphyllum cf. alalongum R.A.SCOTT et E.A.WHEELER, UF 279-24543. a, b: Diffuse-porous wood, exclusively solitary vessels, axial parenchyma rare, thick-walled fibers, TS. c: Scalariform perforation plate with more than 30 bars, RLS. d: Helical thickenings (HT) in vessel element tip, RLS. e: Opposite to scalariform intervessel pits, RLS. f, g: Heterocellular rays 1–2 cells wide, occasionally uniseriate and biseriate portions of similar width, TLS. h: Ray with alternating rows of procumbent and upright (-square) cells, RLS. Scale bars: 200 µm in a; 100 µm in b, f; 50 µm in c, g, h; 20 µm in d, e.
Text-fig. 5. SRXTM images of Miranthus elegans gen. et sp. nov.; Mira locality, Portugal. a, b: Transverse sections of flower (a, orthoslice xy0665 close to the apex of placenta; b, orthoslice xy0800 in middle part of placenta) showing remains of calyx with distinct bundles (arrows), ovary wall (ow) and numerous ovules (ov) on the central mushroom-shaped globose placenta (pl) with central column (cc). c: Transverse section of flower (orthoslice xy0620) through perianth and ovary (ow) at a level above the placenta showing ovules (ov) and cellular preservation of the sepal bundles (arrows shown for one sepal); note abaxial surface of sepals with thick-walled epidermal cells, thick cuticle, and fine pointed verrucae. d: Longitudinal section of flower (orthoslice xz0500) showing perigynous position of calyx and semi-inferior ovary (ow, ovary wall) with a central placenta (pl), central column (cc) and numerous ovules (ov); note spiny verrucae on abaxial surface of calyx lobes. Specimens, Mira 100-S153145 (a, b), Mira 100-S170155 (c, d, holotype). Scale bars = 600 µm (a–d). in Early Flowers Of Primuloid Ericales From The Late Cretaceous Of Portugal And Their Ecological And Phytogeographic Implications
Text-fig. 5. SRXTM images of Miranthus elegans gen. et sp. nov.; Mira locality, Portugal. a, b: Transverse sections of flower (a, orthoslice xy0665 close to the apex of placenta; b, orthoslice xy0800 in middle part of placenta) showing remains of calyx with distinct bundles (arrows), ovary wall (ow) and numerous ovules (ov) on the central mushroom-shaped globose placenta (pl) with central column (cc). c: Transverse section of flower (orthoslice xy0620) through perianth and ovary (ow) at a level above the placenta showing ovules (ov) and cellular preservation of the sepal bundles (arrows shown for one sepal); note abaxial surface of sepals with thick-walled epidermal cells, thick cuticle, and fine pointed verrucae. d: Longitudinal section of flower (orthoslice xz0500) showing perigynous position of calyx and semi-inferior ovary (ow, ovary wall) with a central placenta (pl), central column (cc) and numerous ovules (ov); note spiny verrucae on abaxial surface of calyx lobes. Specimens, Mira 100-S153145 (a, b), Mira 100-S170155 (c, d, holotype). Scale bars = 600 µm (a–d).
Text-fig. 7. SEM (a) and SRXTM (b–e) images of Miranthus kvacekii sp. nov.; Mira locality, Portugal. a: Lateral view of flower bud showing corolla lobes extending beyond calyx; note surface of pedicel, calyx and corolla with small equiaxial epidermal cells and indumentum of densely spaced, short stiff trichomes. b, c: Longitudinal sections through floral bud in two directions perpendicular to each other (a, orthoslice yz1024; b, orthoslice xz0950) showing corolla (co), calyx (ca), stamens (st) and semi-inferior ovary with thin ovary wall (ow) and central mushroom-shaped globose placenta (pl) bearing numerous ovules (ov). d, e: Transverse sections through floral bud above placenta (d, orthoslice xy0915; e, orthoslice xy1095) showing calyx (ca), corolla (co), ovary wall (ow) and ovules (ov); yellow outlines indicate the positions of anthers (d) and filaments (e); orange outlines indicate the position of three of the possible staminodes. Specimen, Mira 100-S170157 (a–e, holotype). Scale bars = 600 µm (a–c), 300 µm (d, e). in Early Flowers Of Primuloid Ericales From The Late Cretaceous Of Portugal And Their Ecological And Phytogeographic Implications
Text-fig. 7. SEM (a) and SRXTM (b–e) images of Miranthus kvacekii sp. nov.; Mira locality, Portugal. a: Lateral view of flower bud showing corolla lobes extending beyond calyx; note surface of pedicel, calyx and corolla with small equiaxial epidermal cells and indumentum of densely spaced, short stiff trichomes. b, c: Longitudinal sections through floral bud in two directions perpendicular to each other (a, orthoslice yz1024; b, orthoslice xz0950) showing corolla (co), calyx (ca), stamens (st) and semi-inferior ovary with thin ovary wall (ow) and central mushroom-shaped globose placenta (pl) bearing numerous ovules (ov). d, e: Transverse sections through floral bud above placenta (d, orthoslice xy0915; e, orthoslice xy1095) showing calyx (ca), corolla (co), ovary wall (ow) and ovules (ov); yellow outlines indicate the positions of anthers (d) and filaments (e); orange outlines indicate the position of three of the possible staminodes. Specimen, Mira 100-S170157 (a–e, holotype). Scale bars = 600 µm (a–c), 300 µm (d, e).
Text-fig. 16. Photomicrographs of thin sections of specimen BP/16/1734, Terminalioxylon mozambicense sp. nov. from Mhengere Hill, Gorongosa, Mozambique. a: TS with round vessels, scanty paratracheal to vasicentric parenchyma, diffuse and narrow terminal or initial bands; b: TS at higher magnification, note the very narrow rays; c: TLS, vessels with small alternate pits, and partly tylosed; d–g: TLS with crystals (small white arrows) in the parenchyma cells, medium to thick-walled fibres and uniseriate, low rays; h: TLS, rays up to 20 cells high; i: RLS rays with procumbent body cells and 1–2 rows of marginal upright cells. in Stratigraphy, Chronology And Palaeontology Of The Tertiary Rocks Of The Cheringoma Plateau, Mozambique
Text-fig. 16. Photomicrographs of thin sections of specimen BP/16/1734, Terminalioxylon mozambicense sp. nov. from Mhengere Hill, Gorongosa, Mozambique. a: TS with round vessels, scanty paratracheal to vasicentric parenchyma, diffuse and narrow terminal or initial bands; b: TS at higher magnification, note the very narrow rays; c: TLS, vessels with small alternate pits, and partly tylosed; d–g: TLS with crystals (small white arrows) in the parenchyma cells, medium to thick-walled fibres and uniseriate, low rays; h: TLS, rays up to 20 cells high; i: RLS rays with procumbent body cells and 1–2 rows of marginal upright cells.
Text-fig. 15. Photomicrographs of thin sections of holotype BP/16/1738, Sorindeioxylon gorongosense gen. et sp. nov. from Muaredzi site 5, Gorongosa, Mozambique. a: TS, note the irregularly spaced and very narrow bands of parenchyma and mostly solitary vessel elements; b: TS at higher magnification with narrow rays; c: radial longitudinal section (RLS), rather oblique but shows the alternate, small-to-medium inter-vessel pits; d: tangential longitudinal section (TLS), rays are 1–3 cells wide but maintain the same width. Small arrow towards the right hand ray indicates a prismatic crystal in the ray cell; e: TLS rays with fibres in between; f: RLS showing mixed ray cells (upright, square and procumbent) poorly preserved. in Stratigraphy, Chronology And Palaeontology Of The Tertiary Rocks Of The Cheringoma Plateau, Mozambique
Text-fig. 15. Photomicrographs of thin sections of holotype BP/16/1738, Sorindeioxylon gorongosense gen. et sp. nov. from Muaredzi site 5, Gorongosa, Mozambique. a: TS, note the irregularly spaced and very narrow bands of parenchyma and mostly solitary vessel elements; b: TS at higher magnification with narrow rays; c: radial longitudinal section (RLS), rather oblique but shows the alternate, small-to-medium inter-vessel pits; d: tangential longitudinal section (TLS), rays are 1–3 cells wide but maintain the same width. Small arrow towards the right hand ray indicates a prismatic crystal in the ray cell; e: TLS rays with fibres in between; f: RLS showing mixed ray cells (upright, square and procumbent) poorly preserved.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.