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650
datasets available to search
ShareScore release 0.9.0
Dataset results
650 results for “multiomics”
A multimodal cross-species comparison of pancreas development [multiome]
GEO Series GSE262227. Sus scrofa. 12 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
A single-cell atlas of gene expression and chromatin accessibility changes associated with cocaine addiction in the rat amygdala (snATAC-Seq Multiome)
GEO Series GSE235317. Rattus norvegicus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Comparative single-cell multiomic analysis reveals evolutionarily conserved and species-specific cellular mechanisms mediating natural retinal aging
GEO Series GSE307031. Mus musculus. 6 samples. Type: Other.
10X sc-multiome data of NCIH2170 cell line
GEO Series GSE293273. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single-cell multiomics study of cell-type-specific neuron activation unravels context-dependent gene regulation of brain disorders [030]
GEO Series GSE289522. Homo sapiens. 24 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single-cell multiomics study of cell-type-specific neuron activation unravels context-dependent gene regulation of brain disorders [024]
GEO Series GSE289515. Homo sapiens. 30 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Multiomic analysis reveals conservation of cancer associated fibroblast phenotypes across species and tissue of origin [spatial trascriptomics]
GEO Series GSE212706. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Combination of multiomics approach and BCR-ABL based molecular testing: A better way to monitor treatment regimen and disease progression in Chronic Myeloid Leukemia
GEO Series GSE77573. Homo sapiens. 79 samples. Type: Expression profiling by array; Genome variation profiling by SNP array.
One-pot method for preparing DNA, RNA, and protein for multiomics analysis
GEO Series GSE241434. Homo sapiens. 24 samples. Type: Expression profiling by high throughput sequencing; Other.
Multiomic analysis reveals conservation of cancer associated fibroblast phenotypes across species and tissue of origin [scRNA-Seq]
GEO Series GSE212708. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
A single-cell atlas of gene expression and chromatin accessibility changes associated with cocaine addiction in the rat amygdala (snRNA-Seq Multiome)
GEO Series GSE235314. Rattus norvegicus. 2 samples. Type: Expression profiling by high throughput sequencing.
Integrated multiomic analysis identifies functional epigenetic signatures regulating nucleotide excision repair (RNA-seq)
GEO Series GSE161789. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Single-cell multiomics study of cell-type-specific neuron activation unravels context-dependent gene regulation of brain disorders [022]
GEO Series GSE289956. Homo sapiens. 30 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Combination of multiomics approach and BCR-ABL based molecular testing: A better way to monitor treatment regimen and disease progression in Chronic Myeloid Leukemia [OncoScan]
GEO Series GSE77571. Homo sapiens. 39 samples. Type: Genome variation profiling by SNP array.
Multiomic analysis reveals conservation of cancer associated fibroblast phenotypes across species and tissue of origin [multiome]
GEO Series GSE212707. Mus musculus; Homo sapiens. 21 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Integrated multiomic analysis identifies functional epigenetic signatures regulating nucleotide excision repair (meRIP-seq)
GEO Series GSE161792. Homo sapiens. 16 samples. Type: Other.
Combination of multiomics approach and BCR-ABL based molecular testing: A better way to monitor treatment regimen and disease progression in Chronic Myeloid Leukemia [HTA-2_0]
GEO Series GSE77191. Homo sapiens. 40 samples. Type: Expression profiling by array.
Single-cell multiomics study of cell-type-specific neuron activation unravels context-dependent gene regulation of brain disorders [029]
GEO Series GSE289518. Homo sapiens. 24 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Dataset related to article "A 'Multiomic' Approach of Saliva Metabolomics, Microbiota, and Serum Biomarkers to Assess the Need of Hospitalization in COVID-19"
<p>*These authors contributed equally to the work<sup> #</sup>Corresponding author</p> <p>This record contains raw data related to article “A ‘Multiomic’ Approach of Saliva Metabolomics, Microbiota, and Serum Biomarkers to Assess the Need of Hospitalization in COVID-19"</p> <p>Abstract:</p> <p>The SARS-CoV-2 pandemic has overwhelmed the treatment capacity of the healthcare systems during the highest viral diffusion rate. Patients reaching the emergency department had to be either hospitalized or discharged. Still, the decision was taken based on the individual assessment of the actual clinical condition, without specific biomarkers to predict future improvement or deterioration. Often discharged patients returned to the hospital for aggravation of their condition. Here we have developed a new combined approach of omics to identify factors that could distinguish COVID-19 inpatients from outpatients. We tested the metabolome in the saliva and identified nine metabolites that separated the inpatient from the outpatient population, but not completely. When combined with serum biomarkers, just two salivary metabolites (myo-inositol and 2-pyrollidine acetic acid) and one serum protein, Chitinase 3-like-1(CHI3L1) were sufficient to separate the two groups completely. These metabolites positively or negatively correlated with four modulated microbiota taxa. This is a proof-of-concept that a combined omic analysis can be used to stratify patients.</p>
Dataset related to the article "Multiomic Approaches to Uncover the Complexities of Dystrophin-Associated Cardiomyopathy"
<p>This record contains raw data related to the article “Multiomic Approaches to Uncover the Complexities of Dystrophin-Associated Cardiomyopathy”</p> <p>Despite major progress in treating skeletal muscle disease associated with dystrophinopathies, cardiomyopathy is emerging as a major cause of death in people carrying dystrophin gene mutations that remain without a targeted cure even with new treatment directions and advances in modelling abilities. The reasons for the stunted progress in ameliorating dystrophin-associated cardiomyopathy (DAC) can be explained by the difficulties in detecting pathophysiological mechanisms which can also be efficiently targeted within the heart in the widest patient population. New perspectives are clearly required to effectively address the unanswered questions concerning the identification of authentic and effectual readouts of DAC occurrence and severity. A potential way forward to achieve further therapy breakthroughs lies in combining multiomic analysis with advanced preclinical precision<br> models. This review presents the fundamental discoveries made using relevant models of DAC and how omics approaches have been incorporated to date.</p>
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.