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1,353
datasets available to search
ShareScore release 0.9.0
Dataset results
1,353 results for “single-cell transcriptomics”
Microfluidic single-cell whole-transcriptome sequencing
GEO Series GSE47835. Mus musculus. 102 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic analysis reveals the developmental trajectory and transcriptional regulatory networks of pigment glands in Gossypium bickii
GEO Series GSE224635. Gossypium bickii. 19 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic analysis of lung mesenchymal cells with mesenchyme-specific deletion of transcriptional regulator Sin3a
GEO Series GSE246194. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome analysis of aging bone marrow
GEO Series GSE169608. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome landscape of DNA-damage response at single-cell resolution
GEO Series GSE149224. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell Transcriptomics of Genome-Edited Kidney Organoids
GEO Series GSE135663. Homo sapiens. 16 samples. Type: Expression profiling by high throughput sequencing.
Single-cell Transcriptomics Identifies Gene Expression Networks Driving Differentiation and Tumorigenesis in the Human Fallopian Tube
GEO Series GSE151316. Homo sapiens. 28 samples. Type: Expression profiling by high throughput sequencing.
A single-cell transcriptomic dataset of pluripotent stem cell-derived astrocytes via NFIB/SOX9 overexpression
GEO Series GSE245169. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Pooled CRISPR screening with single-cell transcriptome read-out
GEO Series GSE92872. Homo sapiens; Mus musculus. 100 samples. Type: Expression profiling by high throughput sequencing.
Dynamic transcriptome profiles within spermatogonial and spermatocyte populations during postnatal testis maturation revealed by single-cell sequencing
GEO Series GSE121904. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Exploring an essential biomarker in pulmonary fibrosis: an integrated and cross-disease approach with spatial transcriptomics and single-cell RNA sequencing (Spatial Transcriptomics)
GEO Series GSE263976. Homo sapiens. 3 samples. Type: Other.
Cross-species single-cell transcriptomic analysis reveals divergence of cell composition and functions in mammalian ileum epithelium [scRNA-seq_Rat]
GEO Series GSE196660. Rattus norvegicus. 1 samples. Type: Expression profiling by high throughput sequencing.
Integrated single-cell chromatin and transcriptomic analyses of human scalp reveal etiological insights into genetic risk for hair and skin disease
GEO Series GSE212450. Homo sapiens. 23 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single-cell transcriptomic analysis of the AOM/DSS-induced tumor stroma
GEO Series GSE296872. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic analysis of rice root tips [bulk RNA-seq]
GEO Series GSE146033. Oryza sativa. 4 samples. Type: Expression profiling by high throughput sequencing.
High-throughput single-cell transcriptome profiling of plant cell types
GEO Series GSE122687. Arabidopsis thaliana. 11 samples. Type: Expression profiling by high throughput sequencing.
Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k)
GEO Series GSE268018. Plasmodium berghei ANKA; Mus musculus. 38 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic analysis reveals unique cell types and patterns of gene expression in the frog corneal epithelium.
GEO Series GSE154896. Xenopus laevis. 1 samples. Type: Expression profiling by high throughput sequencing.
Comparative single-cell transcriptomics of complete insect nervous systems
GEO Series GSE135810. Drosophila melanogaster. 34 samples. Type: Expression profiling by high throughput sequencing.
RoCK and ROI: a single-cell RNA-sequencing method with enhanced transcriptome information via targeted enrichment of transcripts and preselected, region-specific sequencing II
GEO Series GSE266117. Mus musculus; Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.