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695
datasets available to search
ShareScore release 0.7.1
Dataset results
695 results for “topologies”
Condensin-Driven Remodeling of X-Chromosome Topology during Dosage Compensation [Hi-C]
GEO Series GSE63717. Caenorhabditis elegans. 2 samples. Type: Other.
Regulation of Feather Length: FGF/IGF Signaling and NOTCH/YAP Modulation of Progenitor Cell Topology [bulk RNA-seq]
GEO Series GSE285382. Gallus gallus. 6 samples. Type: Expression profiling by high throughput sequencing.
BRWD1 orchestrates chromatin topology by converting static to dynamic cohesin complexes (Hi-C)
GEO Series GSE221517. Mus musculus. 6 samples. Type: Other.
Genome-wide transcriptional, epigenetic, and topological changes occurring in human natural killer cells in response to HDAC inhibitor [RNA-seq]
GEO Series GSE227659. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Allelic topological centering by transcription factors drives oncogenic multi-enhancer transcriptional regulation [Hi-C]
GEO Series GSE293332. Homo sapiens. 2 samples. Type: Other.
A Switch Between Topological Domains Underlies HoxD Genes Collinearity in Mouse Limbs (4C-Seq)
GEO Series GSE45455. Mus musculus. 15 samples. Type: Other.
High-resolution genome topology of human retina uncovers super enhancer-promoter interactions at tissue-specific and multifactorial disease loci.
GEO Series GSE202474. Homo sapiens. 13 samples. Type: Other; Genome binding/occupancy profiling by high throughput sequencing.
Long-distance association of topological boundaries through nuclear condensates (GRO-Seq)
GEO Series GSE195562. Homo sapiens. 8 samples. Type: Other.
Large-scale genomic reorganizations of topological domains (TADs) at the HoxD locus
GEO Series GSE98233. Mus musculus. 15 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Liebenberg syndrome severity arises from variations in Pitx1 locus topology and ectopically transcribing cells
GEO Series GSE256336. Mus musculus. 20 samples. Type: Expression profiling by high throughput sequencing.
Interplay between genome topology and gene regulation during somatic cell reprogramming [RNA-seq]
GEO Series GSE96608. Mus musculus. 16 samples. Type: Expression profiling by high throughput sequencing.
DNA polymerase ε harmonizes topological states and R-loops formation to maintain genome integrity in Arabidopsis
GEO Series GSE216170. Arabidopsis thaliana. 19 samples. Type: Other.
Topological screen identifies hundreds of Cp190 and CTCF dependent Drosophila chromatin insulator elements [ChIP-seq]
GEO Series GSE198762. Drosophila melanogaster. 32 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Tandem CTCF sites function as insulators to balance spatial chromatin contacts and topological enhancer-promoter selection [V]
GEO Series GSE139679. Homo sapiens; Mus musculus. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Topologically associating domains and chromatin loops depend on cohesin and are regulated by CTCF, WAPL and PDS5 proteins
GEO Series GSE102884. Homo sapiens. 30 samples. Type: Other; Genome binding/occupancy profiling by high throughput sequencing.
Cohesin Members Stag1 and Stag2 Display Distinct Roles in Chromatin Accessibility and Topological Control of HSC Self-Renewal and Differentiation [ATAC_LSK_GMP_CFUE_Stag2KOWT]
GEO Series GSE138003. Mus musculus. 14 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genome-wide transcriptional, epigenetic, and topological changes occurring in human natural killer cells in response to HDAC inhibitor [in situ Hi-C]
GEO Series GSE227662. Homo sapiens. 4 samples. Type: Other.
Xist upstream deletion impairs topological contacts of Xist locus and affects Xist coating/expression and autosomal gene expression [RNA-Seq]
GEO Series GSE245640. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.
Topological regulation of the estrogen transcriptional response by ZATT-mediated inhibition of TOP2B activity [ChIP-Seq]
GEO Series GSE236412. Homo sapiens. 69 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Dissection of a CTCF insulator and its impact on chromosome topology and oncogene expression in gastrointestinal stromal tumor (RNA-Seq)
GEO Series GSE241926. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.