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7,849 results for “Conservancy”
Figure 5 from: Phung C-C, Yong Y-Z, Said MAM, Liew T-S (2018) Land snail fauna in Gunung Kuang Limestone Hill, Perak, Malaysia and its conservation implications (Mollusca, Gastropoda). ZooKeys 769: 1-11. https://doi.org/10.3897/zookeys.769.25571
Figure 5 Macrochlamys 'kuang 1' (BORMOL 13784).
Figure 2 from: Phung C-C, Yong Y-Z, Said MAM, Liew T-S (2018) Land snail fauna in Gunung Kuang Limestone Hill, Perak, Malaysia and its conservation implications (Mollusca, Gastropoda). ZooKeys 769: 1-11. https://doi.org/10.3897/zookeys.769.25571
Figure 2 Microcystina 'kuang 2' (BORMOL 13769).
Figure 4 from: Phung C-C, Yong Y-Z, Said MAM, Liew T-S (2018) Land snail fauna in Gunung Kuang Limestone Hill, Perak, Malaysia and its conservation implications (Mollusca, Gastropoda). ZooKeys 769: 1-11. https://doi.org/10.3897/zookeys.769.25571
Figure 4 Kaliella 'kuang 1' (BORMOL 13787).
Figure 3 from: Phung C-C, Yong Y-Z, Said MAM, Liew T-S (2018) Land snail fauna in Gunung Kuang Limestone Hill, Perak, Malaysia and its conservation implications (Mollusca, Gastropoda). ZooKeys 769: 1-11. https://doi.org/10.3897/zookeys.769.25571
Figure 3 Microcystina 'kuang 3' (BORMOL 13767).
Figure 1 from: Phung C-C, Yong Y-Z, Said MAM, Liew T-S (2018) Land snail fauna in Gunung Kuang Limestone Hill, Perak, Malaysia and its conservation implications (Mollusca, Gastropoda). ZooKeys 769: 1-11. https://doi.org/10.3897/zookeys.769.25571
Figure 1 Microcystina 'kuang 1' (BORMOL 13768).
Figure 8 from: Miu IV, Chisamera GB, Popescu VD, Iosif R, Nita A, Manolache S, Gavril VD, Cobzaru I, Rozylowicz L (2018) Conservation priorities for terrestrial mammals in Dobrogea Region, Romania. ZooKeys 792: 133-158. https://doi.org/10.3897/zookeys.792.25314
Figure 8 Dissimilarity map of Dobrogea mammal species, Romania (S2 index).
Figure 7 from: Miu IV, Chisamera GB, Popescu VD, Iosif R, Nita A, Manolache S, Gavril VD, Cobzaru I, Rozylowicz L (2018) Conservation priorities for terrestrial mammals in Dobrogea Region, Romania. ZooKeys 792: 133-158. https://doi.org/10.3897/zookeys.792.25314
Figure 7 Corrected weighted rarity map of Dobrogea mammal species.
Figure 5 from: Miu IV, Chisamera GB, Popescu VD, Iosif R, Nita A, Manolache S, Gavril VD, Cobzaru I, Rozylowicz L (2018) Conservation priorities for terrestrial mammals in Dobrogea Region, Romania. ZooKeys 792: 133-158. https://doi.org/10.3897/zookeys.792.25314
Figure 5 The mammal species richness at 5 × 5 km grid resolution within Dobrogea.
Figure 6 from: Costa WJEN, Amorim PF, Mattos JLO (2018) Diversity and conservation of seasonal killifishes of the Hypsolebias fulminantis complex from a Caatinga semiarid upland plateau, São Francisco River basin, northeastern Brazil (Cyprinodontiformes, Aplocheilidae). Zoosystematics and Evolution 94(2): 495-504. https://doi.org/10.3897/zse.94.29718
Figure 6 Hypsolebiasfulminantis, UFRJ 4847, female, 34.0 mm SL. Photograph by W.J.E.M. Costa.
Figure 5 from: Costa WJEN, Amorim PF, Mattos JLO (2018) Diversity and conservation of seasonal killifishes of the Hypsolebias fulminantis complex from a Caatinga semiarid upland plateau, São Francisco River basin, northeastern Brazil (Cyprinodontiformes, Aplocheilidae). Zoosystematics and Evolution 94(2): 495-504. https://doi.org/10.3897/zse.94.29718
Figure 5 Hypsolebiasfulminantis, UFRJ 4847, male, 44.0 mm SL. Photograph by W.J.E.M. Costa.
Figure 2 from: Qin J, Liu X, Xu Y, Wu X, Ouyang S (2019) Beta diversity patterns of fish and conservation implications in the Luoxiao Mountains, China. ZooKeys 817: 73-93. https://doi.org/10.3897/zookeys.817.29337
Figure 2 Fish composition from the streams of the Luoxiao Mountains.
Figure 1 from: Qin J, Liu X, Xu Y, Wu X, Ouyang S (2019) Beta diversity patterns of fish and conservation implications in the Luoxiao Mountains, China. ZooKeys 817: 73-93. https://doi.org/10.3897/zookeys.817.29337
Figure 1 Map showing the sampling location of the streams of the Luoxiao Mountains.
Figure 2 from: Lemos-Espinal JA, Smith GR, Rorabaugh JC (2019) A conservation checklist of the amphibians and reptiles of Sonora, Mexico, with updated species lists. ZooKeys 829: 131-160. https://doi.org/10.3897/zookeys.829.32146
Figure 2 Climate map of the state of Sonora, Mexico (modified from García – CONABIO 1998).
Is conservation of center of mass mechanics a priority in human walking? Insights from leg-length asymmetry experiments
<p>See ReadMe.txt</p>
Conservation, acquisition, and functional impact of sex-biased gene expression in mammalian tissues
<p>Processed data and code for</p> <p>Sahin Naqvi, Alexander K. Godfrey, Jennifer F. Hughes, Mary L. Goodheart, Richard N. Mitchell, & David C. Page <br> <br> <strong>Conservation, acquisition, and functional impact of sex-biased gene expression in mammalian tissues</strong></p> <p>Expression values</p> <ul> <li>gtex.filt.salmon.tximport.unadj.tpm.txt.gz Unadjusted TPM values for filtered GTEx samples</li> <li>gtex.filt.salmon.tximport.unadj.counts.txt.gz Unadjusted counts for filtered GTEx samples</li> <li>gtex.filt.salmon.tximport.adj.counts.txt.gz PCA- and histology-adjusted counts for filtered GTEx samples</li> <li>cyno.salmon.tximport.tpm.txt.gz Cynomolgus macaque TPM values</li> <li>cyno.salmon.tximport.counts.txt.gz Cynomolgus macaque counts</li> <li>mouse.salmon.tximport.tpm.txt.gz Mouse TPM values</li> <li>mouse.salmon.tximport.counts.txt.gz<a href="http://pagelab.wi.mit.edu/page/papers/Naqvi_et_al_2019/exprvals/mouse.salmon.tximport.counts.txt.gz"> </a>Mouse counts</li> <li>rat.salmon.tximport.tpm.txt.gz Rat TPM values</li> <li>rat.salmon.tximport.counts.txt.gz Rat counts</li> <li>dog.salmon.tximport.tpm.txt.gz Dog TPM values</li> <li>dog.salmon.tximport.counts.txt.gz Dog counts</li> </ul> <p>Metadata</p> <ul> <li>human.metadata.txt Human metadata (abbreviated version of GTEx metadata)</li> <li>histeval.rds Novel histological evaluations for 6 tissues (.rds file to read into R)</li> <li>nonhuman.metadata.txt Non-human metadata</li> </ul> <p>Scripts</p> <ul> <li>filterSamples.R<a href="http://pagelab.wi.mit.edu/page/papers/Naqvi_et_al_2019/scripts/filterSamples.R"> </a>R code to filter GTEx samples based on medical history and cause of death</li> <li>cadjust_exprvals.Rmd<a href="http://pagelab.wi.mit.edu/page/papers/Naqvi_et_al_2019/scripts/pcadjust_exprvals.Rmd"> </a>R code to perform PCA and histology-based adjustment of expression values in GTEx data</li> <li>choosePCs.R<a href="http://pagelab.wi.mit.edu/page/papers/Naqvi_et_al_2019/scripts/choosePCs.R"> </a>Helper function for 'pcadjust_exprvals.Rmd'</li> <li>perform_sexdiff.Rmd R code to perform linear modeling of sex differences across 12 tissues and 5 species. Uses 'getSexBiasStats.R'</li> <li>getSexBiasStats.R<a href="http://pagelab.wi.mit.edu/page/papers/Naqvi_et_al_2019/scripts/getSexBiasStats.R"> </a>Helper function for 'perform_sexdiff.Rmd'</li> </ul> <p>Intermediate files</p> <ul> <li>one2oneorth_emblids.txt One-to-one orthologs across the 5 species</li> <li>one2oneorth_60spectis_beta.txt Gene x tissue-species matrix of estimates of sex bias (beta)</li> <li>one2oneorth_60spectis_beta_se.txt Gene x tissue-species matrix of estimates of sex bias (beta) standard error</li> <li>one2oneorth_60spectis_mashr_pm.txt Gene x tissue-species matrix of mashr posterior estimates of sex bias (posterior mean)</li> <li>one2oneorth_60spectis_mashr_lfsr.txt Gene x tissue-species matrix of mash local false sign rate</li> <li>salmon.starref.tximport.voom.spec5orth.sfa_F.out Sparse factors learned from the gene x tissue-species beta matrix, used as input to mashr</li> </ul> <p>Output files</p> <ul> <li>sexbias.conserved.matrix.txt Gene x tissue matrix of conserved sex bias. 1 indicates male bias, -1 female bias (same for other matrices in this section)</li> <li>sexbias.primategain.matrix.txt Gene x tissue matrix of sex bias gained in primates</li> <li>sexbias.primateloss.matrix.txt<a href="http://pagelab.wi.mit.edu/page/papers/Naqvi_et_al_2019/sexbias.primateloss.matrix.txt"> </a>Gene x tissue matrix of sex bias lost in primates</li> <li>sexbias.rodentgain.matrix.txt Gene x tissue matrix of sex bias gained in rodents</li> <li>sexbias.rodentloss.matrix.txt Gene x tissue matrix of sex bias lost in rodents</li> <li>sexbias.humangain.matrix.txt Gene x tissue matrix of sex bias gained in human</li> <li>sexbias.cynogain.matrix.txt Gene x tissue matrix of sex bias gained in cyno</li> <li>sexbias.mousegain.matrix.txt Gene x tissue matrix of sex bias gained in mouse</li> <li>sexbias.ratgain.matrix.txt Gene x tissue matrix of sex bias gained in rat</li> <li>sexbias.doggain.matrix.txt Gene x tissue matrix of sex bias gained in dog</li> <li>sexbias.multiplegain.matrix.txt Gene x tissue matrix of sex bias likely gained in multiple lineages</li> <li>sexbias.multipleloss.matrix.txt Gene x tissue matrix of sex bias likely lost in multiple lineages</li> <li>sexbias.complex.matrix.txt Gene x tissue matrix of sex bias with complex patterns across species that could not be categorized into gains or losses</li> </ul> <p>Data from other studies</p> <ul> <li>liang2017.human.skin.txt Limma/voom output of sex differences in human skin, from Liang et al, 2017</li> <li>lindholm2017.human.muscle.txt Limma/voom output of sex differences in human muscle, from Lindholm et al, 2017</li> <li>li2017.marin2017.mouse.heart.txt Limma/voom output of sex differences in mouse heart, combining Li et al, 2017 and Marin et al, 2017</li> <li>li2017.marin2017.mouse.liver.txt Limma/voom output of sex differences in mouse liver, combining Li et al, 2017 and Marin et al, 2017</li> <li>li2017.mouse.adrenal.txt Limma/voom output of sex differences in mouse adrenal gland, from Li et al, 2017</li> <li>li2017.mouse.brain.txt Limma/voom output of sex differences in mouse brain, from Li et al, 2017</li> <li>li2017.mouse.lung.txt Limma/voom output of sex differences in mouse lung, from Li et al, 2017</li> <li>li2017.mouse.muscle.txt Limma/voom output of sex differences in mouse muscle, from Li et al, 2017</li> <li>li2017.mouse.spleen.txt Limma/voom output of sex differences in mouse spleen, from Li et al, 2017</li> <li>yang2006.mouse.muscle.geo2r.txt GEO2R output of sex differences in mouse muscle, from Yang et al, 2006</li> <li>franco2010.mouse.lung.geo2r.txt Lim GEO2R output of sex differences in mouse lung, from Franco et al, 2010</li> </ul>
Figure 1 from: Kipkoech S, Melly DK, Watuma Mwema B, Mwachala G, Musili PM, Hu G, Wang Q (2019) Conservation priorities and distribution patterns of vascular plant species along environmental gradients in Aberdare ranges forest. PhytoKeys 131: 91-113. https://doi.org/10.3897/phytokeys.131.38124
Figure 1 The location of Aberdare ranges forest, (i) two sections of forest (ii) map of Kenya.
Figure 8 from: Lyons J, Piller KR, Artigas-Azas JM, Dominguez-Dominguez O, Gesundheit P, Köck M, Medina-Nava M, Mercado-Silva N, García AR, Findley KM (2019) Distribution and current conservation status of the Mexican Goodeidae (Actinopterygii, Cyprinodontiformes). ZooKeys 885: 115-158. https://doi.org/10.3897/zookeys.885.38152
Figure 8 Distribution of the eight species of Allotoca.
Figure 15 from: Lyons J, Piller KR, Artigas-Azas JM, Dominguez-Dominguez O, Gesundheit P, Köck M, Medina-Nava M, Mercado-Silva N, García AR, Findley KM (2019) Distribution and current conservation status of the Mexican Goodeidae (Actinopterygii, Cyprinodontiformes). ZooKeys 885: 115-158. https://doi.org/10.3897/zookeys.885.38152
Figure 15 Distribution of Xenotoca doadrioi, X. eiseni, and X. lyonsi.
Figure 9 from: Lyons J, Piller KR, Artigas-Azas JM, Dominguez-Dominguez O, Gesundheit P, Köck M, Medina-Nava M, Mercado-Silva N, García AR, Findley KM (2019) Distribution and current conservation status of the Mexican Goodeidae (Actinopterygii, Cyprinodontiformes). ZooKeys 885: 115-158. https://doi.org/10.3897/zookeys.885.38152
Figure 9 Distribution of Ameca splendens, Chapalichthys encaustus, and C. pardalis.
Figure 14 from: Lyons J, Piller KR, Artigas-Azas JM, Dominguez-Dominguez O, Gesundheit P, Köck M, Medina-Nava M, Mercado-Silva N, García AR, Findley KM (2019) Distribution and current conservation status of the Mexican Goodeidae (Actinopterygii, Cyprinodontiformes). ZooKeys 885: 115-158. https://doi.org/10.3897/zookeys.885.38152
Figure 14 Distribution of Neotoca bilineata and the three species of Skiffia.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.