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12,393 results for “materiality”
Supplementary material 1 from: Shivambu N, Shivambu TC, Downs CT (2020) Assessing the potential impacts of non-native small mammals in the South African pet trade. NeoBiota 60: 1-18. https://doi.org/10.3897/neobiota.60.52871
Table S1
Supplementary material 1 from: Walton S, Livermore L, Bánki O, Cubey RWN, Drinkwater R, Englund M, Goble C, Groom Q, Kermorvant C, Rey I, Santos CM, Scott B, Williams AR, Wu Z (2020) Landscape Analysis for the Specimen Data Refinery. Research Ideas and Outcomes 6: e57602. https://doi.org/10.3897/rio.6.e57602
Tools and services evaluation speadsheet
Supplementary material 2 from: Li Y, Li Y, Li H, Wang J, Rong X, Li Y (2020) Niviventer confucianus sacer (Rodentia, Muridae) is a distinct species based on molecular, karyotyping, and morphological evidence. ZooKeys 959: 137-159. https://doi.org/10.3897/zookeys.959.53426
Figure S1–S7, Tables S2–S6. Partial morphological and molecular results
Supplementary material 1 from: Li Y, Li Y, Li H, Wang J, Rong X, Li Y (2020) Niviventer confucianus sacer (Rodentia, Muridae) is a distinct species based on molecular, karyotyping, and morphological evidence. ZooKeys 959: 137-159. https://doi.org/10.3897/zookeys.959.53426
Tables S1. Sampling and Genbank sequences information
Genomic characterization and curation of UCEs improves species tree reconstruction: Supplementary Material S1
<p>Ultraconserved genomic elements (UCEs) are generally treated as independent loci in phylogenetic analyses. The identification pipeline for UCE probes does not require prior knowledge of genetic identity, only selecting loci that are highly conserved, single copy, without repeats, and of a particular length. Here we characterized UCEs from 11 phylogenomic studies across the animal tree of life, from birds to marine invertebrates. We found that within vertebrate lineages, UCEs are mostly intronic and intergenic, while in invertebrates, the majority are in exons. We then curated 4 different sets of UCE markers by genomic category from 5 different studies including: birds, mammals, fish, Hymenoptera (ants, wasps, and bees) and Coleoptera (beetles). Of genes captured by UCEs, we find that many are represented by 2 or more UCEs, corresponding to non-overlapping segments of a single gene. We considered these UCEs to be non-independent, merged all UCEs that belonged to a particular gene, constructed gene and species trees, and then evaluated the subsequent effect of merging co-genic UCEs on gene and species tree reconstruction. Average bootstrap support for merged UCE gene trees was significantly improved across all datasets apparently driven by the increase in loci length. Additionally, we conducted simulations and found that gene trees generated from merged UCEs were more accurate than those generated by unmerged UCEs. As loci length improves gene tree accuracy, this modest degree of UCE characterization and curation impacts downstream analyses and demonstrates the advantages of incorporating basic genomic characterizations into phylogenomic analyses.<br> </p>
Supplementary materials for: Female‐female aggression in a cooperatively breeding bird during the non‐breeding period: The behavioral strategy to maintain long‐term partnerships
<p>Social monogamy evolves in association with biparental care. However, males who tend to pursue multiple mating are expected to place less value on established partnerships, whereas females do the opposite to ensure males'participation in rearing offspring. Accordingly, selection is expected to favor paired females to behave aggressively towards females that approach their social mates. For species with long-term partnerships, female-female aggression commonly observed during the breeding period should also occur in the non-breeding period. We look at whether these expectations are held up by conducting a field experiment in Tibetan ground tits Pseudopodoces humilis, a cooperatively breeding bird that has lifetime monogamy and forms new pair bonds in winter. Paired but not unpaired females were more aggressive towards the same-sex than towards opposite-sex intruders experimentally introduced into the winter group territory, an indication that paired females may be protecting partnerships. Both paired and unpaired males, on the other hand, displayed aggression almost equally against intruders of both sexes, indicating a likely function in territory defense. Our work provides the first evidence for the female's role in maintaining long-term monogamy during the non-breeding period in birds, and contributes to the recent progress regarding intrasexual competition between females as a component of sexual selection.</p>
Supplementary material 3 from: Acosta-Galvis AR, Saldarriaga-Gómez AM, Ramírez B, Vargas-Ramírez M (2020) A new Terrarana frog of genus Pristimantis from an unexplored cloud forest from the eastern Andes, Colombia. ZooKeys 961: 129-156. https://doi.org/10.3897/zookeys.961.51971
Figure S2
Supplementary material 2 from: Acosta-Galvis AR, Saldarriaga-Gómez AM, Ramírez B, Vargas-Ramírez M (2020) A new Terrarana frog of genus Pristimantis from an unexplored cloud forest from the eastern Andes, Colombia. ZooKeys 961: 129-156. https://doi.org/10.3897/zookeys.961.51971
Figure S1
Supplementary material 1 from: Di Cecco V, Di Santo M, Di Musciano M, Manzi A, Di Cecco M, Ciaschetti G, Marcantonio G, Di Martino L (2020) The Majella National Park: a case study for the conservation of plant biodiversity in the Italian Apennines. Italian Botanist 10: 1-24. https://doi.org/10.3897/italianbotanist.10.52952
Complete list of taxa stored at the MSB
Supplementary material 4 from: Dixey K, Woodburn M, Hardy H, Livermore L, Smith VS (2020) Identification of provisional Centres of Excellence for digitisation of European natural science collections. Research Ideas and Outcomes 6: e57750. https://doi.org/10.3897/rio.6.e57750
WP7 MS45 Centres of Excellence - Service Descriptions
Supplementary material 3 from: Dixey K, Woodburn M, Hardy H, Livermore L, Smith VS (2020) Identification of provisional Centres of Excellence for digitisation of European natural science collections. Research Ideas and Outcomes 6: e57750. https://doi.org/10.3897/rio.6.e57750
WP7 MS45 Centres of Excellence - Service Requirements
Supplementary material 2 from: Dixey K, Woodburn M, Hardy H, Livermore L, Smith VS (2020) Identification of provisional Centres of Excellence for digitisation of European natural science collections. Research Ideas and Outcomes 6: e57750. https://doi.org/10.3897/rio.6.e57750
WP7 MS45 Centres of Excellence - Service x Levels
Supplementary material 1 from: Dixey K, Woodburn M, Hardy H, Livermore L, Smith VS (2020) Identification of provisional Centres of Excellence for digitisation of European natural science collections. Research Ideas and Outcomes 6: e57750. https://doi.org/10.3897/rio.6.e57750
WP7 workshop for identification of provisional centres of excellence for digitisation
Role of the Cost Function for Material Parameter Estimation - Data Set
<p>##################################################################################################</p> <p><strong>Attention: We found an error in our optimisation template, related to the results that are provided in figure 2. We are working on fixing the issue and upload a corrected version in the upcoming days.</strong></p> <p> </p> <p> </p> <p> </p> <p>Dataset for the contribution "Role of the Cost Function for Material Parameter Determination" to the "<a href="https://www.femtc.com/events/2020/">Fire and Evacuation Modeling Technical Conference</a>" (FEMTC) 2020.</p> <p> </p> <p>It contains:</p> <ul> <li>the complete data of each IMP run,</li> <li>simulations of the best parameter sets of each IMP run,</li> <li>the IMP run for the reaction kinetics parameters,</li> <li>the validation simulations,</li> <li>the plots shown in the article and presentation, as well as</li> <li>the Jupyter Notebooks used for the data analysis.</li> </ul> <p>Note: The copper foil thickness is set to0.2 mm in all simulations, due to a typo in the FDS input file template and should have been 0.025 mm according to the <a href="https://www.sciencedirect.com/science/article/abs/pii/S0379711217300541">article describing CAPA II</a>. A simulation with the correct thickness showed very little divergence from the conducted simulations, thus the effect of the typo is regarded to be neglectable. Therefore, all files in this data repository are using the incorrect initial value. The mentioned simulations and a plot comparing both results are provided in this repository.</p> <p> </p> <p>Version 1.1:</p> <p>Added slides and article.</p>
Supplementary material 4 from: Martínez-Domínguez L, Nicolalde-Morejón F, Lorea-Hernández FG, Vergara-Silva F, Stevenson DWm (2020) A novelty in Ceratozamia (Zamiaceae, Cycadales) from the Sierra Madre del Sur, Mexico: biogeographic and morphological patterns, DNA barcoding and phenology. PhytoKeys 156: 1-25. https://doi.org/10.3897/phytokeys.156.53502
Table S1.
Supplementary material 2 from: Martínez-Domínguez L, Nicolalde-Morejón F, Lorea-Hernández FG, Vergara-Silva F, Stevenson DWm (2020) A novelty in Ceratozamia (Zamiaceae, Cycadales) from the Sierra Madre del Sur, Mexico: biogeographic and morphological patterns, DNA barcoding and phenology. PhytoKeys 156: 1-25. https://doi.org/10.3897/phytokeys.156.53502
Fig. S1. Strict consensus tree of nine equally parsimonious trees
Supplementary material 3 from: Martínez-Domínguez L, Nicolalde-Morejón F, Lorea-Hernández FG, Vergara-Silva F, Stevenson DWm (2020) A novelty in Ceratozamia (Zamiaceae, Cycadales) from the Sierra Madre del Sur, Mexico: biogeographic and morphological patterns, DNA barcoding and phenology. PhytoKeys 156: 1-25. https://doi.org/10.3897/phytokeys.156.53502
File S2
Supplementary material 1 from: Sun J, Zhang D-G, Huang X-H, Tojibaev K, Yang J-Y, Wang H-C, Deng T (2020) Primula sunhangii (Primulaceae): a new species from Hubei, Central China. PhytoKeys 156: 103-112. https://doi.org/10.3897/phytokeys.156.49137
Taxa, specimen collection information, GenBank accession numbers of all studied samples
Additional Material: Virtual Humans in AR: Evaluation of Presentation Concepts in an Industrial Assistance Use Case
<p>Additional material to the evaluation on different presentation concepts of a virtual human in HMD-based AR</p>
Quantitative Nanoscale Absorption Mapping: A Novel Technique To Probe Optical Absorption of Two-Dimensional Materials
<p>Two-dimensional semiconductors, in particular transition metal dichalcogenides and related heterostructures, have gained increasing interest as they constitute potential new building blocks for the next generation of electronic and optoelectronic applications. In this work, we develop a novel nondestructive and noncontact technique for mapping the absorption properties of 2D materials, by taking advantage of the underlying substrate cathodoluminescence emission. We map the quantitative absorption of MoS<sub>2</sub> and MoSe<sub>2</sub> monolayers, obtained on sapphire and oxidized silicon, with nanoscale resolution. We extend our technique to the characterization of the absorption properties of MoS<sub>2</sub>/MoSe<sub>2</sub> van der Waals heterostructures. We demonstrate that interlayer excitonic phenomena enhance the absorption in the UV range. Our technique also highlights the presence of defects such as grain boundaries and ad-layers. We provide measurements on the absorption of grain boundaries in monolayer MoS<sub>2</sub> at different merging angles. We observe a higher absorption yield of randomly oriented monolayers with respect to 60° rotated monolayers. This work opens up a new possibility for characterizing the functional properties two-dimensional semiconductors at the nanoscale.</p> <p> </p> <p>This dataset contains some of the raw data for Figures 1 and 2.</p>
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.