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FIGURE 4 A in An overview of fish bioacoustics and the impacts of anthropogenic sounds on fishes
FIGURE 4 A frontal view of the head of Gadus morhua showing a section of the saccule (). The saccular chamber is filled with perilymph and contains the otolith (), which lies close to the sensory hair cells of the epithelium (macula). The hair cells are innervated by the eighth cranial nerve. Fig. © 2018 Anthony D. Hawkins, all rights reserved
FIGURE 8 in Effects of repeated anaesthesia on gill and general health of Atlantic salmon, Salmo salar
FIGURE 8 Seven Box plot of median (), 25th and 75th percentiles (), range () and outlier () leukocytes counts of whole blood smears from Salmo salar given single (n = 10) or repeated (n = 30) exposure to the anaesthetics MS-222 (80 mg l−1), metomidate (12.5 mg l−1) and AQUI-S (17 mg l−1). (a) lymphocytes; (b) thrombocytes; (c) neutrophils, (d) monocytes. *, P <0.05
FIGURE 7 in Effects of repeated anaesthesia on gill and general health of Atlantic salmon, Salmo salar
FIGURE 7 Box plot of median (), 25th and 75th percentiles (), range () and outlier () glucose concentrations of plasma from Salmo salar after single (n = 10) or repeat exposure (n = 30) to the anaesthetics MS-222 (80 mg l−1), metomidate (12.5 mg l−1) and AQUI-S (17 mg l−1). No significant differences were found using a Van der Waerden test
FIGURE 4 in Effects of repeated anaesthesia on gill and general health of Atlantic salmon, Salmo salar
FIGURE 4 Mean (+SE) accumulation of anaesthetics MS-222, metomidate and AQUI-S in muscle tissue of Salmo salar, as detected by liquid chromatography mass spectrometry. Repeated exposure groups were anaesthetized to Stage III Plane 1 at seven timepoints every four days (Figure 1), followed by a lethal dose of anaesthetic at day 28. Single exposure groups were left undisturbed throughout the experiment, until day 28 and then treated with a lethal dose of anaesthetic. No significant differences were found between single and repeated doses of respective anaesthetics () Single, and () Repeated
FIGURE 6 in Effects of repeated anaesthesia on gill and general health of Atlantic salmon, Salmo salar
FIGURE 6 Mean (+SE) expression of selected genes from Salmo salar head kidney relative to the housekeeping gene elongation factor α (elfα). Head kidney was analysed after a single (n = 10) or repeated exposure (n = 30) to (a) MS-222 (80 mg l−1) () Single, and () Repeat, (b) metomidate (12.5 mg l−1) () Single, and () Repeat and (c) AQUI-S (17 mg l−1) () Single, and () Repeat. Log -transformed data were 10 compared by one-way ANOVA. *P <0.05
FIGURE 3 in Effects of repeated anaesthesia on gill and general health of Atlantic salmon, Salmo salar
FIGURE 3 Mean epithelial lifting score (Table 1) for Salmo salar gills assessed by histology after repeated or single dose exposures of fish to the anaesthetics MS-222 (80 mg l−1), metomidate (12.5 mg l−1) and AQUI-S (17 mg l−1). Different letters denote significant differences (P <0.05) between groups assessed by ordinal regression analysis
FIGURE 5 in Effects of repeated anaesthesia on gill and general health of Atlantic salmon, Salmo salar
FIGURE 5 Mean (+SE) relative expression of selected genes in Salmo salar gills. Gene expression level was quantified by real-time PCR, normalized using the housekeeping gene elongation factor α (elfα), and expressed as arbitrary unit where the expression in single exposure is 1. Gills were analysed after a single (n = 10) or repeated exposure (n = 30) to (a) MS-222 (80 mg l−1) () Single, and () Repeat, (b) metomidate (12.5 mg l−1) () Single, and () Repeat and (c) AQUI-S (17 mg l−1) () Single, and () Repeat. Log -transformed data were 10 compared by one-way ANOVA. *P <0.05; **, P <0.01; ***P <0.001
FIGURE 1 in An overview of fish bioacoustics and the impacts of anthropogenic sounds on fishes
FIGURE 1 Fish hearing sensitivity (thresholds) obtained under open sea, free-field, conditions in response to pure tone stimuli at different frequencies. The lower the thresholds (y-axis), the more sensitive the fish is to a sound. Thus, Clupea harengus has best hearing of all of these species over a wider range of frequencies. Note that the thresholds in Gadus morhua and C. harengus obtained under quiet conditions may be below natural ambient noise levels, especially at their most sensitive frequencies. In the presence of higher levels of noise, the thresholds would be raised, a phenomenon referred to as masking. Gadus morhua and C. harengus are sensitive to both sound pressure and particle motion, whereas Limanda limanda and Salmo salar are only sensitive to particle motion. The reference level for the particle velocity is based on the level that exists in a free sound field for the given sound pressure level. n.b., For the particle velocity levels in this figure to match the sound pressure levels in a free sound field it is necessary to calculate an appropriate particle velocity reference level. If the standard reference levels are used, then the curves will not match one another and so they are not included here to keep the figure relatively simple. Fig. © 2018 Anthony D. Hawkins, all rights reserved
FIGURE 5 in Spawning energetics and otolith microchemistry provide insights into the stock structure of bonga shad Ethmalosa fimbriata
FIGURE 5 (a) Monthly mean (SD; n, sample size) oocyte energy content and (b) boxplots (, median; ⊺, 5th and 95th percentiles;, outliers) of spawning batch energy content of female Ethmalosa fimbriata sampled at Joal (Senegalese southern coast), Djifer (Saloum River mouth) and Foundiougne (Saloum River middle reaches) from February to October 2014. Different lowercase letters indicate significant differences (P <0.05). Movfree, Ovary-free body mass
FIGURE 8 in Comparison between Atlantic salmon Salmo salar post-smolts reared in open sea cages and in the Preline raceway semi-closed containment aquaculture system
FIGURE 8 Mean (S.E.; n = 30) relative gene transcription values for (a) mef2c () Reference, and () Preline, (b) gata4 () Reference, and () Preline and (c) vegf () Reference, and () Preline using ef1α as standard in Salmo salar heart, both in fresh water and after rearing in Preline semiclosed containment system (S-CCS;) and reference group open pen () for 4 months in seawater. Significant differences between groups are indicated by different lower-case letters
FIGURE 2 in Effects of repeated anaesthesia on gill and general health of Atlantic salmon, Salmo salar
FIGURE 2 Differential-interference contrast images of Salmo salar gill after dosing with three anaesthetic agents: (a) single and (d) repeat exposure to MS-222 (80 mg l−1); (b) single and (e) repeat exposure to metomidate (12 mg l−1); (c) single and (f) repeat exposure to AQUI-S (17 mg l−1). e, epithelial cell; sl, secondary lamella; p, pillar cell; g, goblet cell; pl, primary lamellae; er, erythrocyte., Area showing evidence of epithelial lifting; S.I., foci of mild subepithelial infiltration. Scale bar 100 μm. Magnification ×400
FIGURE 1 Log2 in Effects of repeated anaesthesia on gill and general health of Atlantic salmon, Salmo salar
FIGURE 1 Log2 mean (SD, n = 3) repeat-treatment induction times of Salmo salar () to Stage III, Plane 1 anaesthesia with MS-222 (80 mg l−1), metomidate (12.5 mg l−1) and AQUI-S (17 mg l−1). P> 0.05 for each anaesthetic, as assessed by repeated measures ANOVA () MS-222, () Metomidate, and () AQUI-S
FIGURE 7 in Comparison between Atlantic salmon Salmo salar post-smolts reared in open sea cages and in the Preline raceway semi-closed containment aquaculture system
FIGURE 7 Mean (S.E.; n = 30) relative gene transcription values for (a) Igf-I () Reference, and () Preline, (b) igf1ra () Reference, and () Preline, and (c) igf1bp1a () Reference, and () Preline using ef1α as standard in Salmo salar muscle, both in fresh water and during rearing in Preline semiclosed containment system (S-CCS;) and reference group (). Significant differences through time are denoted with capital letters within the reference group and lower-case letters within Preline S-CCS. SW, seawater
FIGURE 3 in Body shape and robustness response to water flow during development of brown trout Salmo trutta parr
FIGURE 3 Mass–standard length (M–LS) relationships (MLR) determined for exercised () and control () Salmo trutta cohorts over 0–32 weeks from treatment initiation. Each cohort included LS00 individuals (n = 6) as a common origin
FIGURE 3 in Comparison between Atlantic salmon Salmo salar post-smolts reared in open sea cages and in the Preline raceway semi-closed containment aquaculture system
FIGURE 3 Mean [S.E.; n = 30; (a), (c), (d)] Salmo salar growth in mass (M) fork length (LF) and Fulton's condition factor (K) measured in freshwater (15 April 2016) and during the post-smolt phase (1–2 June; 1–2 June and 29–30 August 2016) (a) Measured mass () Preline, and () Reference, (b) estimated mean mass (Fishtalk calculations, CEF = 1.1) () Reference, and () Preline, (c) mean fork length () Preline, and () Reference and (d) condition factor (K) () Preline, and () Reference. Estimated mean mass covers both the post-smolt phase 5 May to 30 August, and the growth phase 31 August to 30 November. Changeover is indicated with a dot in the figure. SW, seawater. Significant difference between groups; *p <0.05; ***p <0.001
FIGURE 4 in Comparison between Atlantic salmon Salmo salar post-smolts reared in open sea cages and in the Preline raceway semi-closed containment aquaculture system
FIGURE 4 Accumulated mortality of Salmo salar in the Preline semiclosed containment system (S-CCS) 30 April to 30 August followed by the open pen growth phase (Buholmen) from 1 September to 30 November (;, changeover from S-CCS to open pen). The accumulated mortality in the reference group covers the period 5 May to 30 November ()
FIGURE 1 in Body shape and robustness response to water flow during development of brown trout Salmo trutta parr
FIGURE 1 (a) Landmark positions () on Salmo trutta parr that were digitised twice and then averaged to minimize measurement error. (b) Shape changes associated with principal components (PCs) 1–3. PCs were derived from a between-group PC analysis of Procrustes superimposed landmarks., Consensus shape with numbered landmark positions;, Shape changes associated with each PC. Shape changes are scaled to observed PC scores: Left hand side shape changes (back outlines) are scaled to the minimum value observed across the sample on each respective PC (shown below the image) and right hand side shape changes (black outlines) are scaled to the maximum value observed across the sample on each respective PC. PC1 describes a change in head size, PC2 describes dorso-ventral arching of the body and PC3 describes changes in overall robustness and body depth
FIGURE 5 in Comparison between Atlantic salmon Salmo salar post-smolts reared in open sea cages and in the Preline raceway semi-closed containment aquaculture system
FIGURE 5 Mean (+S.E.) Salmo salar skeletal muscle fibre diameter frequency distribution reared in Preline semi-closed containment system () and reference S. salar () after 4 months in seawater. Significant difference between groups; *p <0.05; ***p <0.001
FIGURE 2 in Comparison between Atlantic salmon Salmo salar post-smolts reared in open sea cages and in the Preline raceway semi-closed containment aquaculture system
FIGURE 2 (a) Alternate day mean water temperature and (b) salinity at the Salmo salar post- smolt Preline semi-closed containment system () and reference group () rearing systems between 5 May and 30 November 2016. Data from Preline S-CCS represents the Buholmen open-pen between 31 August and 30 November 2016
FIGURE 1 in Comparison between Atlantic salmon Salmo salar post-smolts reared in open sea cages and in the Preline raceway semi-closed containment aquaculture system
FIGURE 1 (a) Location of experiment area in Norway and (b) locations of the Preline semi-closed containment system (S-CCS), reference, freshwater and growing phase groups of Salmo salar post-smolts in Hordaland region; (c) schematic of the S-CCS; (d) standard open sea cages for S. salar production in Norway; (e) drawing of an open conical pen used to hold the reference group of fish
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
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DANDI Archive for NWB datasets
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International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.